Re: [R] hdf5 package

I am having the same issue with the HDF5 package. I installed the latest hdf5 DLLs from HDFGroup. I also installed the HDFView application from the same. This was all done on Windows. The example in ?hdf5load can be used to test. The example works fine for saving and loading the

[R] hdf5 package

Hi all, I'm testing the use of the hdf5 R library under Windows XP. With some simple example (an R list with several subobjects as showed in the examples in the library) the library exports and imports .hdf files adequately. However, if I try to open the exported file with another program

Re: [R] hdf5 package

On Mon, 14 Dec 2009, jgar...@ija.csic.es wrote: Hi all, I'm testing the use of the hdf5 R library under Windows XP. With some simple example (an R list with several subobjects as showed in the examples in the library) the library exports and imports .hdf files adequately. However, if I try to

Re: [R] hdf5 package segfault when processing large data

Hi Budi and Bill, As a workaround, you could try setting your stack limit to a larger limit (ulimit -s). I'll change that to a heap allocation. Thanks, Marcus William Dunlap wrote: This is probably due to the code in hdf5.c allocating a huge matrix, buf, on the stack with 883

[R] hdf5 package segfault when processing large data

Hi there, I am currently working on something that uses hdf5 library. I think hdf5 is a great data format, I've used it somewhat extensively in python via PyTables. I was looking for something similar to that in R. The closest I can get is this library: hdf5. While it does not work the same way

Re: [R] hdf5 package segfault when processing large data

-Original Message- From: r-help-boun...@r-project.org [mailto:r-help-boun...@r-project.org] On Behalf Of Budi Mulyono Sent: Monday, August 24, 2009 3:38 AM To: r-help@r-project.org Subject: [R] hdf5 package segfault when processing large data Hi there, I am currently working