[R] S+ArrayAnalyzer and BioConductor Announcement

Greetings to all and apologies for any cross-postings. If you know of anyone else who could benefit from this announcement please forward to them. Best regards and good luck to everyone, Michael O'Connell. BioConductor Project and Insightful Corp. Collaboration Announcement This week, Insightful

[R] Problems running RSPerl w. SuSe 9.0 / Perl 5.8.1

perl module. I also tried to compile R from scratch ( gcc 3.3.1), reinstalled RSPerl, but the problem remains. We have no Idea how to get RSPerl to work but we need it very urgently. Do you have any Ideas how to resolve this? Thank you very much in advance. Kind Regards Michael

Re: [R] Opening help pages in new tab of existing Mozilla Firebird

://www.stat.math.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide! http://www.R-project.org/posting-guide.html -- Michael Morley Bioinformatics Specialist University of Pennsylvania Department of Pediatrics 3516 Civic Center Blvd., 510B Abramson Pediatric Research Center, Philadelphia, PA 19104

Re: [R] R 1.8.1 - 1.9.0 incompatability: Underscore in syntactically valid names

for now, and I encourage any authors of contributing packages to do their best to maintain backwards compatibility for those of us who cannot make the switch quickly. Mike -- Michael A. Miller [EMAIL PROTECTED] Imaging Sciences, Department of Radiology, IU School

RE: [R] Help with hclust() and plot()

-Original Message- From: Sundar Dorai-Raj [mailto:[EMAIL PROTECTED] Sent: 20 May 2004 19:04 To: michael watson (IAH-C) Cc: R-Help (E-mail) Subject: Re: [R] Help with hclust() and plot() michael watson (IAH-C) wrote: Hi Thanks for that! BUT if I use as.dendrogram, I can't use my

RE: [R] Help with hclust() and plot()

to plot that I need to set, but which one ? :-( Thanks Mick -Original Message- From: michael watson (IAH-C) Sent: 21 May 2004 11:53 To: [EMAIL PROTECTED] Cc: R-Help (E-mail) Subject: RE: [R] Help with hclust() and plot() Hi Thanks again, but it *still* doesn't work! I used the following

RE: [R] Help with hclust() and plot()

, the example is given as: highlevel plot (..., tag = value) So, I know I must be doing something stupid, but I have no idea what Mick -Original Message- From: Sean Davis [mailto:[EMAIL PROTECTED] Sent: 21 May 2004 12:30 To: michael watson (IAH-C); [EMAIL PROTECTED] Cc: r-help Subject: Re: [R

RE: [R] Help with hclust() and plot()

Thank you one and all, I have figured it out now; Cheers Sean! -Original Message- From: Rolf Turner [mailto:[EMAIL PROTECTED] Sent: 21 May 2004 15:13 To: [EMAIL PROTECTED] Subject: Re: [R] Help with hclust() and plot() Tamas Papp wrote: On Fri, May 21, 2004 at 07:56:02AM -0400,

[R] Help with hclust() and plot()

). Is this possible in R? Thanks Mick Michael Watson Head of Informatics Institute for Animal Health, Compton Laboratory, Compton, Newbury, Berkshire RG20 7NN UK Phone : +44 (0)1635 578411 ext. 2535 Mobile: +44 (0)7990 827831 E-mail: [EMAIL PROTECTED] __ [EMAIL

RE: [R] Help with hclust() and plot()

help! Mick -Original Message- From: Sundar Dorai-Raj [mailto:[EMAIL PROTECTED] Sent: 20 May 2004 16:49 To: michael watson (IAH-C) Cc: R-Help (E-mail) Subject: Re: [R] Help with hclust() and plot() michael watson (IAH-C) wrote: Hi When I use plot(hclust(dist..)...)...) etc to create

[R] R 1.8.1 - 1.9.0 incompatability: Underscore in syntactically valid names

. Mike -- Michael A. Miller [EMAIL PROTECTED] Imaging Sciences, Department of Radiology, IU School of Medicine __ [EMAIL PROTECTED] mailing list https://www.stat.math.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting

[R] Help with hclust() and plot()

). Is this possible in R? Thanks Mick Michael Watson Head of Informatics Institute for Animal Health, Compton Laboratory, Compton, Newbury, Berkshire RG20 7NN UK Phone : +44 (0)1635 578411 ext. 2535 Mobile: +44 (0)7990 827831 E-mail: [EMAIL PROTECTED] __ [EMAIL

Re: [R] rbind with missing columns

6 NA Give you what you wanted? You can always strip out the id column if you wish (after sorting on it if you would like the original order back. Thank you for your help Klaus Michael Dewey [EMAIL PROTECTED] __ [EMAIL PROTECTED] mailing list https

[R] Re:Importing SPSS Data Entry data files

data file, which you can import into R using the 'foreign' library, or through R Commander. Michael Bibo Research Officer Alcohol, Tobacco and Other Drugs Service Resource Unit West Moreton Community Health Services West Moreton Health Service District Queensland Health [EMAIL PROTECTED] Ph. +61

[R] Barplot and R 1.9.0

(gregmisc) x-rep(1:3,20) barplot(table(x)) barplot2(table(x)) for an example. Michael Bibo Queensland Health [EMAIL PROTECTED] *** This email, including any attachments sent with it, is confidential and for the sole

Re: [R] formatted table to disk

Randy == Randy Zelick [EMAIL PROTECTED] writes: Hello there, Using R 1.8.1 and WinXP... I would like to write a disk file (ascii text) of an R data frame. When I type the name of the object in the console window, it is sensibly and nicely formatted. When I use

[R] how to add legend to time series plot

) reply directly to me. Thanks very much, Michael __ [EMAIL PROTECTED] mailing list https://www.stat.math.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide! http://www.R-project.org/posting-guide.html

[R] modelling nested random effects with interactions in R

to statistics, the archived help files on the R website, an the examples and help files in R. Your help with this problem is greatly appreciated- I do hope to hear from someone as to how I might get this to work. Sincerely, -- Michael Rennie Ph.D. Candidate University of Toronto at Mississauga 3359

[R] Re: How transform excell file to text file in R

Message: 56 Hello, it want to know if there is a library that transform a file in excell (*. xls) to text file(*.txt, *,prn, *.csv). Thanks library(RODBC) will read your Excel file into R. You do not need a copy of Excel to do this. Michael Dewey [EMAIL PROTECTED

[R] Lattice, skip= and layout= problem, plotting object from nlme output

-Verlag} } Michael Dewey [EMAIL PROTECTED] __ [EMAIL PROTECTED] mailing list https://www.stat.math.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide! http://www.R-project.org/posting-guide.html

Re: [R] Lattice, skip= and layout= problem, plotting object from nlme output

available. I find myself making so many more graphical displays because they are (a) easy (b) aesthetically pleasing (c) revealing about my dataset. Deepayan Michael Dewey [EMAIL PROTECTED] __ [EMAIL PROTECTED] mailing list https://www.stat.math.ethz.ch

Re: [R] Re: 1.8.1 Make problem on SunOS

operations. Perhaps an addition to the R installation notes... Best regards, Michael Ash On Tue, 16 Mar 2004, Michael Ash wrote: OK, I solved my problem in case anyone is still interested. I have set noclobber (don't redirect on top of an existing file) in .bashrc. The problem didn't

[R] 1.8.1 Make problem on SunOS

permission on the machine in question and am planning to install R to my home directory.) Any suggestions? Thank you very much. Best regards, Michael Ash, Assistant Professor of Economics and Public Policy Department of Economics and CPPA University of Massachusetts Amherst, MA 01003 Tel 413-545

Re: [R] Writing Rd files dor package

/Rd files. Can you reduce one of your Rd-files to a minimum-length example? Regards Michael Martin Olivier wrote: Hi all, I have some problems to write help files for a package. I don't understant how to include help files in a package that I develop. I have written the Rd files that I

[R] R newbie question

thanks please feel free to reply directly to my email ([EMAIL PROTECTED]) Michael Hopkins _/_/_/_/_/_/_/_/_/_/_/_/_/_/_/_/_/_/_/_/_/_/_/_/_/_/_/_/_/_/_/_/_/_/_/_/_/_/ _/_/ _/_/_/ Hopkins Research Ltd _/_/ _/_/ _/_/_/_/ _/_/_/Virtual

Re: [R] Statistiques avec R

Indeed, the site is a treasure. Thank you very much for pointing it out. Arigato gozaimashita Michael Grant --- Shigeru Mase [EMAIL PROTECTED] wrote: Dear R users, I want to share my joy with you. Please see the following excellent introduction to R Statistiques avec R by Vincent

[R] Testing significance in a design with unequal but proportional sample sizes

discussions in the archives revolving around type III sums of squares from 2001, but the lack of consensus around the discussion did little to assure me that I should try this approach. Anyone with advice, code or suggestions, I'd love to hear any of it. Cheers, Mike -- Michael Rennie Ph.D. Candidate

re: [R] boxplot notches

are equal. I believe this is explained in @Article{McGill-etal:78, author = R. McGill and J. W. Tukey and W. Larsen, year = 1978, title =Variations of Box Plots, journal = TAS, volume = 32, pages =12--16, } -- Michael Friendly Email: [EMAIL

Re: [R] no subject [list.files]

Hi, have a look at list.files() and import them in a loop or similar. Regards Michael Claudia Paladini wrote: Content-Type: text/plain; charset=iso-8859-1 Content-Transfer-Encoding: 7bit X-Spam-Checker-Version: SpamAssassin 2.63 (2004-01-11) on hypatia.math.ethz.ch X-Spam-Status: No, hits

Re: [R] R: Including R plots in a Microsoft Word document

for OpenOffice 1.0.3 and Word 2000 on windows 2000 pro. I get similar results for openoffice 1.1 on windows and various linuxes too. Mike -- Michael A. Miller [EMAIL PROTECTED] Imaging Sciences, Department of Radiology, IU School of Medicine

[R] problem with abline for x.y

(x.y, col=gray, lwd=2) library(car) data.ellipse(child, parent, plot.points=FALSE, levels=c(0.40, 0.68), lty=2) The resulting figure may be seen at http://euclid.psych.yorku.ca/SCS/Gallery/Private/galton.jpg -Michael -- Michael Friendly Email: [EMAIL PROTECTED] Professor, Psychology Dept. York

RE: [R] ANOVA procedure on the sufficient statistics

means and MSE, however. Larsen's procedure generates a weighted data set that gives the same ANOVA table as the raw data, but requires that the weight= argument be used in aov(). (weights are not supported in all related functions) -Michael -- Michael Friendly Email: [EMAIL PROTECTED

[R] Confidence intervals for logistic regression

and/or score-based confidence intervals? Yours, Michael ~ Michael Levine Assistant Professor Department of Statistics School of Arts and Sciences Purdue University Office: MATH 438 150 N. University Street West Lafayette, IN 47907 phone (765)496-7571 e-mail: [EMAIL PROTECTED

re: [R] ANOVA procedure on the sufficient statistics

. -- Michael Friendly Email: [EMAIL PROTECTED] Professor, Psychology Dept. York University Voice: 416 736-5115 x66249 Fax: 416 736-5814 4700 Keele Streethttp://www.math.yorku.ca/SCS/friendly.html Toronto, ONT M3J 1P3 CANADA __ [EMAIL

[R] manova() with a data frame

also help if model.frame returned something to indicate which variable had an invalid type.) -Michael -- Michael Friendly Email: [EMAIL PROTECTED] Professor, Psychology Dept. York University Voice: 416 736-5115 x66249 Fax: 416 736-5814 4700 Keele Streethttp://www.math.yorku.ca/SCS

[R] Error Installing dse Package

in non-writable section (__TEXT,__const) make: *** [dse1.so] Error 1 ERROR: compilation failed for package 'dse1' The two packages setNRG and tFrame seemed to install fine since they both show up as loadable packages in RAqua. Any help definitely appreciated !!! Tanks very much, michael

Re: [R] calling R from a shell script and have it display graphics

Don == Don MacQueen [EMAIL PROTECTED] writes: I don't know about the simpler part, but you could use the tcltk package to put up a window that prompts the user to continue. Here's a function that does that. I use to prompt the user to choose among printing the current device

Re: [R] AGREP

be calculated using reduction operators, or even a correlation, based on the positions of the 1s. Thinking in arrays always helps avoid explicit loops. -- Michael Friendly Email: [EMAIL PROTECTED] Professor, Psychology Dept. York University Voice: 416 736-5115 x66249 Fax: 416 736-5814 4700 Keele

[R] Installation on Mac OS X 10.3.2 with Fink readline and headers

-shlib with the package installer? Thanks for any help. I've checked the archives and done a bit of googling, but didn't find anything I thought was applicable. Michael Glaesemann grzm myrealbox com __ [EMAIL PROTECTED] mailing list https

[R] nedit syntax highlighting patterns for R?

: == NEdit: style name required in style specification: Note:darkRed:Italic == NEdit: expecting quoted string in language mode specification: ==q .r .R:: -- Michael Friendly Email: [EMAIL PROTECTED] Professor, Psychology Dept. York University Voice: 416 736-5115 x66249 Fax: 416 736-5814

Re: [R] Doubt about pattern

Marcelo Luiz de Laia wrote: [...] only the files that finish in .sens.. I execute the command below, files - dir(pattern=*.sens) files - list.files(./, \.sens$) -- Michael T. Mader Institute for Bioinformatics/MIPS, GSF Ingolstaedter Landstrasse 1 D-85764 Neuherberg 0049-89-3187-3576

Re: [R] Fitting compartmental model with nls and lsoda?

(fit.rk4)) -- Michael A. Miller [EMAIL PROTECTED] Imaging Sciences, Department of Radiology, IU School of Medicine __ [EMAIL PROTECTED] mailing list https://www.stat.math.ethz.ch/mailman/listinfo/r-help PLEASE do read

[R] Fitting compartmental model with nls and lsoda?

Version: 0.5-8 -- Michael A. Miller [EMAIL PROTECTED] Imaging Sciences, Department of Radiology, IU School of Medicine __ [EMAIL PROTECTED] mailing list https://www.stat.math.ethz.ch/mailman/listinfo/r-help PLEASE do read

Re: [R] Roracle pre-compile error?

Hi as the Error message tells you: proc (the Pro*C precompiler of Oracle) is not in the $PATH variable. Perhaps you try to compile on a Oracle Client box w/o the complete development client? Regards Michael Christian Schulz wrote: Hi, trying ROracle failed? I'm using Oracle.8.1.7 which

re: [R] how to overlap plots

Try the distplot() function in package vcd. -Michael -- Michael Friendly Email: [EMAIL PROTECTED] Professor, Psychology Dept. York University Voice: 416 736-5115 x66249 Fax: 416 736-5814 4700 Keele Streethttp://www.math.yorku.ca/SCS/friendly.html Toronto, ONT M3J 1P3 CANADA

[R] old version of R for Windows

I am looking for old version of R for Windows (before 1.5). Where would I find them? Michael LEGAL NOTICE\ Unless expressly stated otherwise, this messag...{{dropped}} __ [EMAIL PROTECTED] mailing list https://www.stat.math.ethz.ch/mailman/listinfo

Re: [R] Plot grouped data: How to change x-axis? (nlme)

), aspect=0.6, xlab=Months, scales=list(x=list(at=seq(0,24,6))) ) Happy New Year, Mike -- Michael A. Miller [EMAIL PROTECTED] Imaging Sciences, Department of Radiology, IU School of Medicine __ [EMAIL

Re: [R] Resampling Stats software - link to book mentioned

://www.resample.com Regards, Michael Grant __ [EMAIL PROTECTED] mailing list https://www.stat.math.ethz.ch/mailman/listinfo/r-help

[R] R on Itanium in 64bit mode? Experiences?

in 64bit mode. He can easily allocate 13GB of RAM in a single R process. It would be great if someone in the forum could share his Itanium experiences with respect to that. (OS/compiler issues would also be interesting..) Thanks best wishes from Vienna, Michael

[R] RE: R performance questions

challenge. Regards, Michael Benjamin, MD -Original Message- From: Liaw, Andy [mailto:[EMAIL PROTECTED] Sent: Wednesday, December 03, 2003 9:47 PM To: 'Michael Benjamin' Subject: RE: [BioC] R performance questions Another point about benchmarking: As has been discussed on R-help before

[R] Persistent state of R

Hi I am using R as a back-end to some CGI scripts, written in Perl. My platform is Suse Linux 8.2, Apache 1.3.7. So the CGI script takes some form parameters, opens a pipe to an R process, loads up some Bioconductor libraries, executes some R commands and takes the ouput and creates a web

Re: [R] correlation and causality examples

] Dear All, I'am looking for examples showing that correlation does not imply causality, the targeted audience consists of undergraduate students (their first year at the university but in the BioMathStat track). All practicals are under R. -- Michael Friendly Email: [EMAIL PROTECTED] Professor

Re: [R] newbie's additional (probably to some extent OT) questions

JB == JB [EMAIL PROTECTED] writes: (1) So finally, thank to your help I have this: summary(lm(x ~ 0+I(t^2))) [...] Would you post your data set? It is hard for me to sort out what is going on without seeing the input. Regards, Mike __

Re: [R] Binaries for ROracle and V 1.8. needed

). Who has a binary version of ROracle for my configuration? I don't think that this will help you (at least it will NOT be robust!) Is there another way to connect to an Oracle base? In principle yes, but this is clearly the recommended way. Regards Michael -- Michael T. Mader Institute

Re: [R] Beginner: Homogenity of Variances

summary. This is implemented and described in my STAT2DAT macro, http://www.math.yorku.ca/SCS/sasmac/stat2dat.html It should be easy to translate into R. -- Michael Friendly Email: [EMAIL PROTECTED] Professor, Psychology Dept. York University Voice: 416 736-5115 x66249 Fax: 416 736-5814

[R] \mathcal symbols in R?

so? Is it in general possible to use further mathematical fonts like \mathbb and \mathbf in R? Best Michael -- Dr. Michael Grottke University of Erlangen-Nuremberg Chair of Statistics and Econometrics Lange Gasse 20, D-90403 Nuernberg, Germany Phone

[R] How to upgrade R

Hi I wondered what the standard procedure was for upgrading from one version of R to the next. I currently have R 1.7.1 and want the latest release, R 1.8.0. I am running SUSE linux 8.2. The main thing is that I want to keep all of the libraries that I have installed for R 1.7.1 without

[R] Number Format

Hi A very simple question on number formats. After some calculations, some variables I have come out looking like this: -1.892972e+00 Now apart from the fact that the e+00 is completely redundant, I would rather have the number represented without the e bit. I want to export data like this

[R] Specifying suitable PC to run R

(few thousand cases, few hundred variables). In order to facilitate working with colleagues I need to stick with windows even if linux would be more efficient Michael Dewey [EMAIL PROTECTED] http://www.aghmed.fsnet.co.uk/home.html __ [EMAIL PROTECTED

[R] Rdinfo verbosity increased in 1.8.0?

to decrease Rdinfo's standard verbosity? Regards Michael -- Michael T. Mader Institute for Bioinformatics/MIPS, GSF Ingolstaedter Landstrasse 1 D-80937 Neuherberg 0049-89-3187-3576 XML can be a simplifying choice or a complicating one. There is a lot of hype surrounding it, but don't become a fashion

[R] (no subject)

Good afternoon, We currently have R installed on our HP Superdome. However, we are getting ready to migrate from RISC to Itanium 2 chips running HP-UX (not Linux). Does the latest version of R run on HP-UX Itanium 2? Any information would be greatly appreciated. Michael

Re: [R] Point and click

of t.test - some people are able and willing to learn it and some aren't. Mike -- Michael A. Miller [EMAIL PROTECTED] Imaging Sciences, Department of Radiology, IU School of Medicine __ [EMAIL PROTECTED] mailing list https

Re: [R] data.frame subsetting

Hi, I think I have the same problem. The following works aa-data.frame(1:10) ab-data.frame(1:12) ba-data.frame(1:14) bb-data.frame(1:16) xa-data.frame() xa$aa-aa xa$ab-ab xb-data.frame() xb$ba-ba xb$bb-bb xx-data.frame() xx$xa-xa xx$xb-xb summary(xx) xa.aa.X1.10 xa.ab.X1.12

[R] ungrouping grouped data

this in R, but surely there must be an easier way. (In APL2 it would be frequency\[1]galton) thanks, -Michael -- Michael Friendly Email: [EMAIL PROTECTED] Professor, Psychology Dept. York University Voice: 416 736-5115 x66249 Fax: 416 736-5814 4700 Keele Streethttp://www.math.yorku.ca

Re: [R] 64-bit Oracle interface

Hi, this is clearly not a problem of ROracle but very likely one of the client configuration/connection stuff. Is TNS on the client configured correctly (looks like the client cannot map the server and, hence, does not find the listener; very common Oracle mistake)? Regards Michael Joerg

[R] (Fwd) Re: goodfit macro

do. What I need to know is how to obtain the application itself. My thanks in advance for any help you can provide. MS --- Forwarded message follows --- Date sent: Tue, 23 Sep 2003 09:14:28 -0400 From: Michael Friendly [EMAIL PROTECTED] Subject

[R] RSPython crashes (using R 1.7.1 under Solaris 5.9)

in configure and tried to install again. The installation worked without problems, but after calling python and importing RS the python interpreter immediately crashes with a segmentation fault. Thanks for any hints. Michael __ [EMAIL PROTECTED] mailing list https

[R] convert a Character-string to a number

Hi Everyone. I have a simple problem but don't know, how to get along. how can I convert the vector a-c(0,01,1,00) in a vector b-c(0.01,1.00) Thank you for suggestions M.Kirschbaum [[alternative HTML version deleted]] __ [EMAIL

Re: [R] Making R packages (Unix)

No such file or directory tar: WARNING! These file names were not selected: /Users/gattuso/documents/unix/R/CO2.Rcheck/CO2_1.0.tar CO2_1.0.tar: No such file or directory Looks like R_HOME is set to an invalid directory. Regards Michael -- Michael T. Mader Institute for Bioinformatics/MIPS

Re: [R] How do I coerce numeric factor columns of data frame to vector?

Na == Na Li [EMAIL PROTECTED] writes: x - c(1, 3, 1) y - factor (x) y [1] 1 3 1 Levels: 1 3 as.numeric (y) [1] 1 2 1 Ah, now I get it - thanks! Mike __ [EMAIL PROTECTED] mailing list

Re: [R] How do I coerce numeric factor columns of data frame to vector?

Murray == Murray Jorgensen [EMAIL PROTECTED] writes: I have just noticed that quite a few columns of a data frame that I am working on are numeric factors. For summary() purposes I want them to be vectors. Do you want them to be vectors or do you want numeric values? If the

[R] lme in R and Splus

,lty=1) # END OF CODE ##3 -- * | Michael Fugate Temp Phone: (505) 665-1817 | | Statistical Sciences Group, D-1

[R] Minard's Challenge: Re-Visioning Minard Contest

with reactions to this challenge and what they deem useful to share with all readers. Other ways to reply include posting a web URL where readers can view the details or a direct email reply to me. -- Michael Friendly Email: [EMAIL PROTECTED] Professor, Psychology Dept. York University Voice

[R] RFE implemented?

Hi, is there an implementation of RFE (recursive feature elimination; see e.g. Guyon et al. 2002, Furlanello et al. 2003) existing in R? Thanks for your help! Regards Michael -- Michael T. Mader Institute for Bioinformatics/MIPS, GSF Ingolstaedter Landstrasse 1 D-80937 Neuherberg 0049-89-3187

[R] spatial statistics vs. spatial econometrics

. Is there a reason why there appears to be so few cross references between these camps? What makes each approach best for different kinds of problems? I'd greatly appreciate your insights. Many thanks, Michael J. Roberts Resource Economics Division Production, Management, and Technology

[R] how to make a plot without any axis-labeling

Hi. I got a problem, perhaps someone can help me... every time, when I want to plot data, both axis are labeled by default like data[1,] and data[2,] how can I make a plot without ANY labeling? does anyone know that? thanks for helping Michael [[alternative HTML version

RE: [R] R won't connect to the internet on SUSE Linux 8.1

Mick -Original Message- From: Luke Tierney [mailto:[EMAIL PROTECTED] Sent: 26 July 2003 16:40 To: michael watson (IAH-C) Cc: 'James MacDonald '; '[EMAIL PROTECTED] ' Subject: RE: [R] R won't connect to the internet on SUSE Linux 8.1 On the SuSE setup I have access to it seems

RE: [R] R won't connect to the internet on SUSE Linux 8.1

CCGC Ann Arbor MI 48109 734-647-5623 michael watson (IAH-C) [EMAIL PROTECTED] 07/25/03 07:18AM Hi Henrik Thanks for your help, I really do appreciate it. If I follow your instructions, R returns the value http://wwwcache.bbsrc.ac.uk:8080. That is good and it means that indeed my http_proxy

[R] R won't connect to the internet on SUSE Linux 8.1

2003 16:56 To: michael watson (IAH-C) Subject: RE: [R] Your proxy seems not to work with R (was R won't connect to the internet on Linux!) When I do (under tcsh) env http_proxy=http://wwwcache.bbsrc.ac.uk:8080/ R options(internet.info=0) update.packages() trying URL `http://cran.r-project.org

RE: [R] R won't connect to the internet on SUSE Linux 8.1

;) and source() does not accept an option 'method=wget' SO... is there a way in R that I can set it up such that ALL internet connections from within R use method=wget ?? Thanks Mick -Original Message- From: Henrik Bengtsson [mailto:[EMAIL PROTECTED] Sent: 25 July 2003 11:25 To: 'michael watson

[R] R won't connect to the internet on Linux!

OK, I really am struggling with this one! Forgive me if I am being stupid I am running R 1.7.1 on Suse Linux 8.1. I connect to the internet through a proxy so I have: IAHC-LINUX03:~ # echo $http_proxy wwwcache.bbsrc.ac.uk:8080 IAHC-LINUX03:~ # echo $HTTP_PROXY wwwcache.bbsrc.ac.uk:8080

RE: [R] R won't connect to the internet on Linux!

-Original Message- From: Prof Brian Ripley [mailto:[EMAIL PROTECTED] Sent: 24 July 2003 13:17 To: michael watson (IAH-C) Cc: '[EMAIL PROTECTED] ' Subject: Re: [R] R won't connect to the internet on Linux! On Thu, 24 Jul 2003, michael watson (IAH-C) wrote: OK, I really am struggling

RE: [R] R won't connect to the internet on Linux!

I know for a fact that my proxy isn't going to work on port 80. So what I need to know is why R is choosing to ignore http_proxy -Original Message- From: Bashir Saghir (Aztek Global) [mailto:[EMAIL PROTECTED] Sent: 24 July 2003 15:06 To: 'michael watson (IAH-C)' Subject: RE

Re: [R] .ps files in R

You can include in your latex with \includegraphics[angle=90]{foo.eps} __ [EMAIL PROTECTED] mailing list https://www.stat.math.ethz.ch/mailman/listinfo/r-help

[R] R won't connect to the internet

Hi I can't get R to connect to the internet. I am running R 1.7.1 on Windows XP and whenever I try to download packages etc from within R using the internet, it fails. OK so I am behind a firewall and use a proxy server SO, if I go to my MS-DOS prompt and type: RGui.exe

Re: [R] Excel can do what R can't?????

environment (but otherwise it won't change anything). What's lexical scoping? Mike -- Michael Rennie M.Sc. Candidate University of Toronto at Mississauga 3359 Mississauga Rd. N. Mississauga ON L5L 1C6 Ph: 905-828-5452 Fax: 905-828-3792 __ [EMAIL

[R] turning list-elements into a vector

Hi. Can anyone help me? I want to create a vector from specific matrix-elements( e.g.[1,1]) these matrices are elements of a list. Is there any possibility to work without a loop? (e.g. with lapply?) hope, you can help me thank you Michael [[alternative HTML version deleted

Re: [R] Excel can do what R can't?????

on it. __ [EMAIL PROTECTED] mailing list https://www.stat.math.ethz.ch/mailman/listinfo/r-help -- Michael Rennie M.Sc. Candidate University of Toronto at Mississauga 3359 Mississauga Rd. N. Mississauga ON L5L 1C6 Ph: 905-828-5452 Fax: 905-828-3792

RE: [R] Excel can do what R can't?????

in excel- it's something about how R is examining the possibilities in the optimization process that is giving me different answers between the two. I dunno- I'm going to tinker with it some more tonight. Mike Reid -Original Message- From: Michael Rennie [mailto:[EMAIL PROTECTED] Sent

RE: [R] Excel can do what R can't?????

Huntsinger -Original Message- From: Spencer Graves [mailto:[EMAIL PROTECTED] Sent: Wednesday, July 16, 2003 5:20 PM To: Michael Rennie Cc: Huntsinger, Reid; R-Help Subject: Re: [R] Excel can do what R can't? I'm confused: I've done this type of thing by programming

[R] (no subject)

Hi I got a problem with creating a textfile: how can I create a textfile, which has a headline like: #data1 1 2 3 4 5 6 7 8 the problem is, how to bind text and matrix, so that the read.table-function will ignore the text and read the numbers. Thank you for help Michael -- 2

[R] Excel can do what R can't?????

Michael Rennie M.Sc. Candidate University of Toronto at Mississauga 3359 Mississauga Rd. N. Mississauga, ON L5L 1C6 Ph: 905-828-5452 Fax: 905-828-3792 [[alternative HTML version deleted]] __ [EMAIL PROTECTED] mailing list https

Re: [R] Excel can do what R can't?????

, 2003 10:46 am, Michael Rennie wrote: Hi there I thought this would be of particular interest to people using 'optim' functions and perhaps people involved with R development. I've been beaten down by R trying to get it to perform an optimization on a mass-balance model. I've written

[R] Processing List-elements

Hello. I got a problem with processing a list: How can I kill the first row of each element of a list, without using a loop? Is there a function that processes each element of a list in a way I can choose? thank you for answering... [[alternative HTML version deleted]]

[R] problem with coding for 'optim' in R

, + lower = c(0, 0), upper=c(2, 10)) Error in [-(*tmp*, i, value = (W[i - 1] + (Gr[i - 1]/Ef))) : nothing to replace with Execution halted Michael Rennie M.Sc. Candidate University of Toronto at Mississauga 3359 Mississauga Rd. N. Mississauga, ON L5L 1C6 Ph: 905-828-5452 Fax: 905

Re: [R] problem with coding for 'optim' in R

in optim(x, f, etc) To be the starting point for your variable that you specify earlier in the loop under f- function (x) If I am wrong on this, then this could be giving me problems as well. -roger Michael Rennie M.Sc. Candidate University of Toronto at Mississauga 3359 Mississauga Rd. N

Re: [R] problem with coding for 'optim' in R

in optim(q, f, method = L-BFGS-B, lower = c(0, 0), upper = c(2, : L-BFGS-B needs finite values of fn Execution halted -- Michael Rennie M.Sc. Candidate University of Toronto at Mississauga 3359 Mississauga Rd. N. Mississauga ON L5L 1C6 Ph: 905-828-5452 Fax: 905-828-3792

Re: [R] solving multiple parameter starting values in nlm

this helps. spencer graves Michael Rennie wrote: Hi there I am having trouble figuring out how to get an nlm function to report estimates for two parameter values in an estimation. The way I've got it goes something like this: f - function (q, r) { here, I have a second loop which uses q, r to give

[R] RE: Xvfb and R

Forgive that last mail, I have now realised it was all complete b*ll*cks ;-) -Original Message- From: michael watson (IAH-C) Sent: 07 July 2003 15:12 To: '[EMAIL PROTECTED]' Subject: Xvfb and R Hi I have recently installed and implemented Xvfb (X virtual frame buffer) so that I can

[R] Xvfb and R

script is run? Cheers Mick Michael Watson Head of Informatics Institute for Animal Health, Compton Laboratory, Compton, Newbury, Berkshire RG20 7NN UK Phone : +44 (0)1635 578411 ext. 2535 Mobile: +44 (0)7764 490236 E-mail: [EMAIL PROTECTED] __ [EMAIL

<    5   6   7   8   9   10   11   >