Gabor Grothendieck wrote:
On 7/7/05, Uwe Ligges [EMAIL PROTECTED] wrote:
Ivy_Li wrote:
Dear all,
I have done every step as the previous mail.
1. unpack tools.zip into c:\cygwin
2. install Active perl in c:\Perl
3. install the mingw32 in c:\mingwin
4. add c:\cygwin; c:\mingwin\bin
. in: .local(x, ...)
So time to report it to the package mainteiner (CCing), if you think it
is an insufficiency or bug.
Uwe Ligges
HTH,
Pablo
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PLEASE do
, please sent me the source package and I will
take a look.
Uwe Ligges
Thank you very much,
Matthias
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PLEASE do read the posting guide! http://www.R
and has no C or FORTRAN code
under the src/ directory.
You are talking about a *package*, not a library.
We do not know, and cannot reproduce anything, obviously...
The posting guide asks you to specify reproducible examples.
Which version of R is this, and which OS?
Uwe Ligges
with a missing value in the given cell.
It's a real show stopper and I haven't found a way
round it.
See ?try
Uwe Ligges
Best wishes,
Mikkel
PS. I'm using dbGetQuery to query an SQLite database.
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()
plot(1:55)
or maybe you are looking for argumet mfrow in ?par
Please read the posting guide.
Uwe Ligges
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:
x1-LETTERS[1:8]; x2-letters[1:8]; x1[2]-NA; x1[4]-NA
df-data.frame(x1=x1, x2=x2)
levels(df$x1) - c(levels(df$x1), levels(df$x2))
idx-which(is.na(df$x1))
df[idx,1]-df[idx,2]
Uwe Ligges
x1-LETTERS[1:8]; x2-letters[1:8]; x1[2]-NA; x1[4]-NA;
df-data.frame(x1=x1, x2=x2)
idx-which(is.na(df$x1
Which version of R is this?
I think during one of the latest releases tempfile() name generation has
been imporved, because R did not tried hard enough to find new (random)
filenames for tempfiles in older releases of R.
Uwe Ligges
At which point Sweave halts. There isn't a logical pattern
then? Are there alternatives?
No, obviously not an ideal method, if used as is on the whole data.
Alternatives are certainly described in the literature - I am not
specialised in this field (I mean, this gene stuff), hence do not want
to specify misleading references here.
Uwe Ligges
1) First problem, I
from as.POSIXlt). Don't have the time to look at
it more closely, perhaps Brian knows it at once?
If this is not already in the bug repository (please check at first),
can you submit a report, please? Thanks!
Uwe Ligges
best regards,
Martin Keller-Ressel
On Wed, 06 Jul 2005 14:45
at
each details of the code below).
One case seems to be described below, where you probably already get
memory problems and hence cannot (at least not without memory penalty)
vectorize any more.
Compromise is the keyword.
Best,
Uwe Ligges
a brief overview of what is done in the code
, nor executable operation or
batch file
*** installation of example failed ***
Well, make.exe is not find in your path. Please check whether the file
exists and the path has been added.
Uwe Ligges
Removing 'D:/PROGRA~1/R/rw2011/library/example'
I think I have closed to success. heehee
from the copy.
Uwe Ligges
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on
Windows XP). RGL and iplots both seem to have potential, but currently
limited functionality.
Is this the state of the art in interactive graphical data analysis in R
Yes, given a certain definition of interactive.
Uwe Ligges
or are there other places to look? A search of this list revealed
) has already been called in the first
iteration.
Why do you want to use it inside the loop?
Uwe Ligges
I'm using R-2.1.0 on Linux with X11; I see the same behavior in Windows.
-- David Brahm ([EMAIL PROTECTED])
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can
do for windows() devices using windows() and brintToTop(), for example.
Uwe Ligges
Thank you!
shengzhe
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PLEASE do read the posting guide! http://www.R
rather than knn().
For randomForest, we will enhance stepclass() to support it in future.
Uwe Ligges
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.
I think you cannot easily handle expressions like this.
Perhaps you better look for some algebra system such as Mathematica and
friends.
Uwe Ligges
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PLEASE do
]: *** [pkg-base] Error 2
make[1]: *** [rpackage] Error 2
make: *** [all] Error 2
Any advise?
hhc.exe is Microsoft's html help compiler. Have you configured MkRules
correctly (you have to chnage the path therein, as the manual suggests),
and hhc.exe in your path?
Uwe Ligges
Philip Bermingham
n is [5,4,3,7,8,9,3]
I want to estimate the vector at time n+1, with some package in R.
Well, which *method* do you want to use?
Do you want to model cross correlation, for example?
Uwe Ligges
Thanks in advance.
MT
[[alternative HTML version deleted
Navarre Sabine wrote:
Make all factor objects to include *all* levels, I guess (since the huge
exmple stuff below is not reproducible).
Uwe Ligges
Hi,
I would like to compare 2 lists resulted from a sql query! bu there are
different levels, so when I want to do:
release1-sqlQuery
Uwe Ligges wrote:
Soma Saha wrote:
Hi!
I got the following runtime error when I tried to use svm method with
stepclass.
Error in colnames-(`*tmp*`, value = c(0, 1)) :
attempt to set colnames on object with less than two dimensions
I repeated the same sequence of statements
for the
posterior?
Uwe LIgges
Many thanks in advance for your help
Mick
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some time, hence you get the expected increase in runtime. This answers
you other question as well.
Uwe Ligges
My suggestion is that you try to vectorize the computation as much
as you
can.
From what you've shown, `new' and `ped' need to have the same
number of
rows, right?
Your `off
In principle you are there, just after opening the device set par(mar)
appropriate (large margin to place the legend in) before starting with
plotting.
In the legend, specify points which virtually are in the margin you have
already expanded...
Uwe Ligges
Ghosh, Sandeep wrote
still need your and others help. Thank you very much!
I think you need to read the manuals before, and additionally seek
advice by a local Windows expert who can tell you relationships between
paths, environment variables, executable files etc.
Uwe Ligges
-原始邮件- 发件人: Gabor
.
Questions like this should better be sent to the package mainatiner or
author of the corresponding function, who probably has more experiences
and background knowledge on the code than (almost?) all other readers of
this list.
Uwe Ligges
thanks
, and the axis annotation shows the
true values. Hence there would be absolutely NO difference in the plot,
and we do not need to add redundancy here!
Uwe Ligges
Thanks
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results each time you run it ...
Uwe Ligges
Best Regards,
Amir
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/
Uwe Ligges
regards
Ahmet Temiz
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Queries to: [EMAIL PROTECTED]
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books that might be
dedicated to R.
Yes, this is a ggod book, quite a lot of other books, online material
and paper are mentioned on CRAN, e.g. CRAN/other-docs.html
the latter points to, e.g.,
http://www.r-project.org/other-docs.html
and
http://www.r-project.org/doc/bib/R-publications.html
Uwe
with the braces?`
What you really want is:
legend(legend = c(expression(L(group(, y, |) * mu))),
x = center)
Uwe Ligges
Thanks!
Lep pozdrav / With regards,
Gregor Gorjanc
--
University of Ljubljana
Biotechnical Faculty
do not have to rescale,
but a transformation of variables might make sense in order to get
better results, though.
Uwe Ligges
thanks a lot for help,
+kind regards,
Arne
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in the comments
that is.all.equal - function(x,y) isTRUE(all.equal(x,y))).
Where is this documented (including version of the source)?
My recent versions of ?all.equal do not mentio it (at least, I cannot
find it).
Uwe Ligges
Could the documentation be corrected? (or even better, how about
, is equivalent for numerous succesive
Why do you think so? It is much more accurate! See ?.Machine
Uwe Ligges
values. How can I get around this?
Spencer Graves [EMAIL PROTECTED] wrote: Part of the R culture
is a statement by Simon Blomberg immortalized in library(fortunes)
as, This is R
into a list by
replicate(1000, YourCall)
If you really want objects X1, ..., Xn, you should read the FAQ and ?assign.
Uwe Ligges
Any suggestions would be appreciated
Sitdikov Mansor
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orkun wrote:
hello
I need basic explanation of variogram
and how to use in R.
Why do you want to use something (variogram) you do not even know?
Please read the posting guide, in particular the sections on homework
and cross posting.
Uwe Ligges
I will appreciate if you supply
use
boot and 632plus. They all share one mypredict.lda.
Will it cause any problem?
No.
mypredict.lda() is a wrapper for errorest() which expects to get the
class from predict(), but not all the other stuff predict.lda() provides.
Uwe Ligges
Regards, justin
Fernando Espíndola wrote:
Hi user,
I try to make plot with two axes y, it is posibility?. Can anyboby help me
Please:
- read the posting guide
- search the R-help archives (this questions has been asked several times)
- see ?axis
Uwe Ligges
thank for all
fernando
. Probably you really want something like
object - split(...)
for(i in seq(along=object))
write.table(SplitObject[[i]], file = names(SplitObject)[i])
Uwe Ligges
I am very new to R so please be kind.
Thank you
Steve
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for the author and maintainer of the
package (in CC).
Uwe Ligges
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Navarre Sabine wrote:
Hi,
I would to get the first letter of a word like:
title_cat
TitleCat
1 Training
I would like T from Training!
Thnaks a lot for your help
substr(title_cat,1,1)
Uwe Ligges
Sabine
above, the x and y vectors are the column and row numbers.
Uwe Ligges
Thanks.
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PLEASE do read the posting guide! http://www.R-project.org/posting-guide.html
to suggest to
write your own little function that generates the legend.
Starting at the upper left, calculating the stringheight, painting the
(party very special) symbols, and adding the text line by line seems to
be the most easiest solution here (which is not that nice, though.
Uwe Ligges
See ?reshape
Uwe Ligges
[EMAIL PROTECTED] wrote:
I receive the following meteo dataset regularly, containing the average
daily temperatures (tMedia) of a certain month for 24 selected meteo-stations
(COD_WMO) whose human-readable names are in (NOME).
str(tabella)
`data.frame': 1038 obs
.
Uwe Ligges
Thank you,
Shengzhe
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arguments do not have names, and they have to in function
declarations
Uwe Ligges
### Intentionally empty body. To be replaced by dyn.load function
}
R CMD check MyConvolve gives an R syntax error.
libname is the directory where the package is saved. The package is being
value is small enough...
... but then you are mixing different concepts.
Uwe Ligges
Wuming
On 6/18/05, Bókony Veronika [EMAIL PROTECTED] wrote:
Dear all,
Could anyone please tell me how 'step' or 'stepAIC' works? Does it
simply select the model with the smallest AIC from all
ronggui wrote:
i have the data x.1
x.1 - data.frame(income=runif(100)*1,
+ edu=sample(c('hs','col','none'),100,T),y=rnorm(100)*100)
and i want to get :
income y
col 5526.726 -11.00956
hs 4196.036 -10.03861
none 4308.111 -28.69549
5526.726 is the mean
}
my question is : what does split(x, g) - lapply(split(x, g), FUN) mean?
See ?split and ?lapply.
x is grouped by g, FUNis applied on each group and assigned back to the
original values.
Uwe Ligges
thank you!
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() it afterwards,
if this is sufficient.]
Uwe Ligges
Cheers,
Jason E. Piccone, Ph.D.
Research and Evaluation Specialist
Department of Correctional Education
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.
and how can I load matlab data files into R?
Dunno, maybe the R.matlab package is of any help.
Uwe Ligges
thx in advance!
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tools installed and in your path.
Uwe Ligges
Bill Northcott
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to the values?
By indexing the original object with these indices. See, e.g., help([)
If you mean something different, please provide a short reproducible
example. and explain what you like to get exactly.
Uwe Ligges
Thanks a lot and have a fun.
Amir
models.
in information content between a model with a given predictor and
another without it is significant?
Well, if you believe AIC is the right criteria, an improvement of the
AIC is enough to choose another model - no further test will be applied.
Uwe Ligges
Thanks for help!
VB
Liaw, Andy wrote:
Now I understand. I get the same thing in SDI mode (R-2.1.0 on WinXPPro).
No idea why...
I guess this is a Windows bug, because I have seen it in other
applications as well. Hence I don't think we should waste our time here ...
Uwe Ligges
Andy
From: Francisco J
., ?reshape
Uwe Ligges
Thanks!
Omer
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that they are vertical)
See ?par and its argument las.
Uwe Ligges
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when I apply svm on the xor object with th replaced data it finds
just one class.
someone any idea
No, almost impossible without having a reproducible example
Uwe Ligges
thx
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error, if the first, you want
to contact the package maintainer rather than R help.
Uwe Ligges
-
Rekindle the Rivalries. Sign up for Fantasy Football
[[alternative HTML version deleted
odbcConnectExcel() in this case ...
Uwe Ligges
Warning messages:
1: [RODBC] ERROR: state IM002, code 0, message [Microsoft][ODBC Driver
Manager] Data source name not found and no default driver specified
2: ODBC connection failed in: odbcDriverConnect(st, case = case,
believeNRows = believeNRows
your problem well enough.
You could look whether y[i-1] y[i] and y[i+1]y[i] if y is ordered
according to x, if this most trivial and very non-robust method fits to
your definition...
Uwe Ligges
Thanks,
Sean
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using the argument sort.
or the levels size?
Do you mean t he font size for annotation? This is descibed in
?mosaicplot - see its argument cex.axis.
Or the number of levels? This again is a matter of the data, not the
plot function.
I'm completely lost what you are going to do...
Uwe Ligges
ERROR: failed to lock directory '/usr/lib/R/library' for modifing
I doubt one directory starts with user and the other one with usr.
Do you have write permission to that directory?
If yes, is 00LOCK already there? Then remove it.
If no, install to a private library.
Uwe Ligges
I would really
subject line.
- Basic statistics and classroom homework: R-help is not intended for
these.
- Provide small reproducible examples.
Uwe Ligges
Best Wishes,
Emre Duran
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Mohammad Ehsanul Karim wrote:
Dear All,
Is there any existing package or direct function in R
/ S-plus that calculates moments (raw or central); the
usual measures of skewness and kurtosis, and/or
pearsonian k criterion?
See package e1071.
Uwe Ligges
Thank you for your time
Make the readline headers/libs available by installing them ...
Uwe Ligges
So I try ./configure --with-readline=no, and it works (I have not try
make, but I will), but I think that now I won't have any historic file for
R, is that true ?
How can I manage to install R without this option
Hans-Peter wrote:
2005/6/9, Sarah Goslee [EMAIL PROTECTED]:
Under R, for reasons I've never quite understood,
\\. evaluates to .
Thanks to the answers of B. Ripley and Gabor I think, I understand now:
1) the patter-string \\.csv$ gives the regular expression \.csv$
2) now the
Navarre Sabine wrote:
hello,
to use the function plot3d, i should use the package R.basic!
plot3d {R.basic}
I have just googled for
plot3d R.basic
and the first hit pointed me to the correct URL
Uwe Ligges
If people know exactly a site to load this package, please give me
the limits and scaling of the axis.
See ?par, in particular par(usr)
Uwe Ligges
Thanks for your help.
Carsten
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PLEASE do
xtable.summary.lm()...
Uwe Ligges
Thanks,
Dimitri Szerman
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PLEASE do read the posting guide! http://www.R-project.org/posting
Ross Boylan wrote:
On Tue, 2005-06-07 at 08:36 +0200, Uwe Ligges wrote:
Ross Boylan wrote:
On Sat, Jun 04, 2005 at 07:08:56PM +0200, Martin Maechler wrote:
Ross nextPath - function(pm){ #pm is a CompletePathMaker
Ross[EMAIL PROTECTED] - [EMAIL PROTECTED](1)
Ross [etc]
If your
afterwards.
Uwe Ligges
On the web site of CRAN, the package basic is impossible to be load!
can you tell me where i can found it!
You already asked this question yesterday (and received no reply because
it doesn't make sense). There is no package with the name basic. There
is only the base
rules and it
will be clear that the approach you are expecting is not a clean one in S.
Uwe Ligges
Ross
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=verbose): none of the packages
were found
Does R CMD INSTALL package work for you? If not, R CMD check makes no
sense so far.
Uwe Ligges
Execution halted.
...
...
Any help will be greatly appreciated.
Thanks in advance.
Choudary Jagarlamudi
Instructor
Southwestern Oklahoma State
temp directory for R to store temp files?
See ?tempfile and ?tempdir
Uwe Ligges
On 6/7/05, Hu Chen [EMAIL PROTECTED] wrote:
hi R folks,
I need read a file from hardisk or www web. Then I need to define some
new functions according to the contents of the read file.
For example, i need write
.
Uwe Ligges
vsub - subset(dm,select=c(DEBITS_POST3))
(vsub$DEBITS_POST3[1:4])
[1] 9,93 0 23,82 32,72
7936 Levels: 0 0,53 0,65 0,73 0,76 1,02 1,03 1,16 1,25 1,28 1,31 1,38
1,45 1,47 1,49 1,52 1,53 1,62 1,68 1,69 1,71 1,72 1,9 10,03 ... 99,98
vsub$DEBITS_POST3 -
as.numeric
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It's not hard, just read the corresponding article in the latest R News.
Uwe Ligges
for me (R-2.1.0, WinNT, but you have not
told us your details!).
BTW: In the meantime package gregmisc has been superseded by the
gregmisc bundle, and later on by a number of packages (such as gtools,
gdata, ...).
Your setup seems to be rather outdated.
Uwe Ligges
Am I missing something
Dan Bolser wrote:
On Sat, 4 Jun 2005, Uwe Ligges wrote:
Dan Bolser wrote:
I want to include missing values in my barplot to get the correct x-axis,
for example,
x - c(1,2,3,4, 9)
y - c(2,4,6,8,18)
barplot(y)
The above looks wrong because the last height in y should be a long way
over
the package
maintainer as well) ...
- Please provide *reproducible* examples (yours was not, because
log='y' was missing). Hence the relevant example we were obviously
talking about is:
y - c(2,4,6,8,NA,NA,NA,NA,18)
barplot(y, log=y)
library(gplots)
barplot2(y, log=y)
Uwe Ligges
allow for passing a function evaluating the derivatives.
Thank you,
Thoralf Mildenberger
Looking at the code suggests that you cannot supply derivates.
Anyway, this question is very special and should perhaps be addressed to
the maintainer of the package rather than R-help.
Uwe Ligges
h3333222
but I need n rows which must be variable. Can anyone help me?
x - matrix(h, nrow = n, ncol = length(h), byrow = TRUE)
Uwe Ligges
thanks Andreas
[[alternative HTML version deleted]]
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?
This is by design, x is not a list but of class
Insetad, you can use slot(), of course or define special exttractor
functions fo your particular class.
Uwe Ligges
Thanks.
Laura Holt
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* of them, and followed the advices given
therein, you are welcome to ask some questions.
Uwe Ligges
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...
Yes, yes:
Yes there is a fix: R has been fixed more than once in the last 3 year.
More precisely, there have been 12 *releases* in the meantime.
So please upgrade!
Uwe Ligges
Best regards,
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= year,
key = simpleKey(levels(barley$year), space = right),
xlab = Barley Yield (bushels/acre) ,
aspect=0.5, layout = c(1,6), ylab=NULL, scales=list(cex=0.5))
Uwe Ligges
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https
It
is
really
hard
to
read
your
message.
Anyway,
I
guess
you
are
looking
for
?reshape
Uwe Ligges
jose silva wrote:
Dear all:
I have this:
A1 B1 C1 D1 E1
A2 B2 C2 D2 E2
A3 B3 C3 D3 E3
And I want this
A1 E1
are not really supported in the
mathematical annotation environment.
Uwe Ligges
(Windows XP + R2.10 user)
Thanks,
Vumani
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PLEASE do read the posting guide!
http
() in
package gtools (formerly in bundle gregmisc, since yesterday a single
package).
Uwe Ligges
Any help is appreciated and I will gladly SUM afterwards.
Thank you,
Tarmo
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GUESS Lab, Department of Geography
University of Toronto
I guess you (well, in fact do not) want something like
pairs(X, gap=0, pch=.)
Uwe Ligges
Frédéric Ooms wrote:
Hello,
I would like to draw a pair plot with a lot of descriptors (see the attached
file) and due to the number of descriptors contained in the file I am not able
to view
?
Operating Sytstem?
PLEASE do read the posting guide!
http://www.R-project.org/posting-guide.html
Uwe Ligges
Jarek
=\
Jarek Tuszynski, PhD. o / \
Science Applications International Corporation \__,|
(703
also read help pages, already the question related to pairs()
could have been avoided by reading the help pages
Uwe Ligges
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PLEASE do read the posting guide! http
?Devices
Please read ?jpeg and see its examples!
jpeg() is not intended to save a plot, but to open a jpeg device you can
plot into and close it afterwards:
jpeg(file=test.jpeg, quality=90)
plot(1:10)
dev.off()
Please try it interaktively at first.
Uwe Ligges
Thanks to help me
in Windows ...
This is a bug. I will followup on R-bugs or R-devel later this day.
BTW: install.packages(class) works for me as expected.
Uwe Ligges
Jarek
\===
Jarek Tuszynski, PhD. o / \
Science Applications
also want to read the R
News article on Namespaces by Luke Tierney.
Moreover, glm is in stats which *has* got a namespace.
Uwe Ligges
FYI, I released VGAM 0.6-3 last Friday which has binomial(), poisson()
etc. removed so that it should no longer conflict with glm(). The
families that work
location.U and weather.V to become a new data
set from which I could undertake a scatterplot matrix of the canonical
variates?
Not sure about your question, but I guess you are simply looking for ?rbind.
Uwe Ligges
brett
Brett Stansfield
Environmental Scientist - Water Quality
Hawke's Bay Regional
by Brian Ripley.
Uwe Ligges
Reinhold
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PLEASE do read the posting guide! http://www.R-project.org/posting-guide.html
(., family=poisson()).
Now the first instance of poisson() in the search path is used. You are
passing a call to poisson(), and this is not bound to any namespace. Of
course you can specify tha namespace such as
glm(., family=stats::poisson()).
Uwe Ligges
Kjetil
is wrong, because it does not even work
to generate the empty plot the way ...
Please read the posting guide and rethink at least one time whether the
code you are giving us is reproducible. Your code was not.
Uwe Ligges
greetings from the sunny tirol with thanks in advance
helli
platform
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