Re: [R] transpose dataset to PC-ORD?

2006-05-23 Thread Jean Eid
I do not know exactly what you are looking for but it seems that you are writing the column names (which become row names) when transposing the data. So to fix this try using write.table(..., sep=,, row.names=F) Jean Daniel Gruner wrote: Hello: I need to take a species-sample matrix and

Re: [R] reading in only one column from text file

2006-03-07 Thread Jean Eid
You might want to read ?scan and pay attention to what= argument Jean mark salsburg wrote: How do I manipulate the read.table function to read in only the 2nd column??? [[alternative HTML version deleted]] __ R-help@stat.math.ethz.ch mailing

Re: [R] glm automation

2006-03-07 Thread Jean Eid
If you know what the dependent variable is called and is the same for all regressions see ?formula Or you can do glm(ABC~. , ...,data=dat) PS. the way you are calling the formula you are taking the first element in the first column and the first element in the second column. So that is not

Re: [R] Sort problem in merge()

2006-03-06 Thread Jean Eid
If believe that merge is trying to put first whatever cells that are nonempty. For example if you instead did tmp2 - data.frame(col1 = factor(c(C, D, E, F,A), levs), col2 = 1:5) tmp2 col1 col2 1C1 2D2 3E3 4F4 5A5 merge(tmp2, tmp1, all.y = TRUE,

[R] symbols function

2006-01-17 Thread Jean Eid
Hi I do not get why the symbols function produces warnings when axes=F is added. The following example illustrate this symbols(0,10, inches=T, circles=1, axes=F, xlab=, ylab=) Warning message: parameter axes could not be set in high-level plot() function I augmented symbols and added the

Re: [R] reading data from a pdf

2005-10-24 Thread Jean Eid
Hi, In my experience pdftotext did not do a very good job at this because it screws up the formatting of tables. This of course depends on what program the pdf document was originally constructed with. What I found most appealing is the use of cut and paste into xemacs or emacs and use M-x

Re: [R] Descriptive statistics for tables

2005-09-30 Thread Jean Eid
I do not totally understand your question as well. You seem to want a descriptive statistic about a unitary number. What is the sd of a number? or any other descriptive statictic. Maybe you mean for the columns or rows or it could be that these are t-stats or z-stats that you need to get p_values

Re: [R] *** saving files ***

2005-09-14 Thread Jean Eid
If your loop is from 1:n then you can do the following. suppose you call the resulslts results 1:n using assign or something. so like this for(i in 1:n){ assign(results_, i, sep=), lm(bla bla)) save(get( for(i in 1:10){ + temp - paste(results_, i, sep=) + assign(temp, rnorm(i)) +

Re: [R] data manipulation

2005-09-08 Thread Jean Eid
I am sure all this work but If you want exaclty the output to be the way you mentioned do this temp-read.table(yourfile, as.is=T, header=T) temp1-temp[, 1:3] temp2-temp[, c(1,2,4)] colnames(temp1)[3]-X colnames(temp2)[3]-X temp3-merge(temp1, temp2, all=T) temp3$type-toupper(substr(temp3$X, 1,2))

Re: [R] Dummy variables model

2005-09-05 Thread Jean Eid
You can turn the identity vector of the firms into a factor and do lm Jean On Mon, 5 Sep 2005, Tobias Muhlhofer wrote: Hi, all! Anyone know an easy way to specify the following model. Panel dataset, with stock through time, by firm. I want to run a model of y on a bunch of

Re: [R] Dummy variables model

2005-09-05 Thread Jean Eid
is the factor of all firm identifiers, I could just go lm(y ~ x + firm) and that will implicitly include a dummy for each level of factor firm, thus making this a fixed effects (aka LSDV) model? T Jean Eid wrote: You can turn the identity vector of the firms into a factor and do lm

Re: [R] R environment

2005-09-01 Thread Jean Eid
want to call at the end, in a directory # of its own. patchCode(path=hot/onFinally/, removeAfter=TRUE) # End of your batch code Cheers Henrik Duncan Murdoch wrote: Jean Eid wrote: This is probably a weird question but I need to know if there is a way... I run an R batch job without

Re: [R] loop

2005-08-31 Thread Jean Eid
just one more thing. Why are you defining the function over and over again... On Wed, 31 Aug 2005, Hathaikan Chootrakool wrote: I was wondering why this loop doesn't work! for (i in 1:k) fnTr[i] - function (p) 0.5* sum ( n*log(2*pi) - log(sd(i)^2)

[R] R environment

2005-08-31 Thread Jean Eid
This is probably a weird question but I need to know if there is a way... I run an R batch job without saving the variables at each step to the disk. Is there a way to invoke another session of R and link it to the same environment for read only. The problem is that I am running optim with

Re: [R] writing to a fixed format (fortran) file

2005-08-27 Thread Jean Eid
why not write.table with sep=\t On Sat, 27 Aug 2005, Duncan Golicher wrote: Could anyone help with what should be a simple task? I have data as a fixed format (fortran) table. I have no trouble getting it into R using read.table. Each column is separated by a space, including the first

Re: [R] priority of operators in the FOR ( ) statement

2005-08-23 Thread Jean Eid
Although it is not as fancy as all other responses, I usually just print the value of i first and see where it stopped. Of course this assumes you it is stored in the main env. If it is inside a function and it is failing I usually use the - operator to get it to the main env. and print it. Here

[R] preprocessing data

2005-08-16 Thread Jean Eid
for website will be greatly appreciated Thank you Jean Eid __ R-help@stat.math.ethz.ch mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide! http://www.R-project.org/posting-guide.html

Re: [R] preprocessing data

2005-08-16 Thread Jean Eid
bates and you should be able to find a copy. Jean Eid wrote: Dear all, My question is concerning the line This is adequate for small files, but for anything more complicated we recommend using the facilities of a language like perl to pre-process the file. in the import/export

Re: [R] preprocessing data

2005-08-16 Thread Jean Eid
Thank you Gabor, Jean On Tue, 16 Aug 2005, Gabor Grothendieck wrote: On 8/16/05, Jean Eid [EMAIL PROTECTED] wrote: Dear all, My question is concerning the line This is adequate for small files, but for anything more complicated we recommend using the facilities of a language like

Re: [R] Problem with numeric variable

2005-08-14 Thread Jean Eid
can you give the line you are using to import the data. On Sun, 14 Aug 2005 [EMAIL PROTECTED] wrote: Well, you were right. When I check with str() or summary(), the data frame appears as having a factor for that column. However, if I ask is.factor(C2), I get FALSE, and if I ask

Re: [R] reverse order of matrix rows

2005-08-08 Thread Jean Eid
sapply(nrow(matrix):1, function(x) matrix[x,]) On Mon, 8 Aug 2005, Jake wrote: Quick question: how can I reverse the order of the rows in a matrix? i.e. make the last row first and the first row last, etc.? __ R-help@stat.math.ethz.ch mailing

Re: [R] Seeking help with a loop

2005-08-03 Thread Jean Eid
You can do the following without resorting to a hard coded loop sapply( paste(q35, letters[1:grep(r, letters)], sep=), function(x) ifelse(temp[, x]%in%1,temp[, sub(5, 3, x)],NA) as the following example shows temp - matrix(sample(c(0,1), 360, replace=T), nrow=10) colnames(temp) - c(paste(q33,

Re: [R] help regarding loops in R

2005-08-03 Thread Jean Eid
if labda is the elements of the vector and you know what kexp is , you can use apply apply(your_vector, 1, function(x) 1- exp^(kexp^(-x))) HTH Jean On Wed, 3 Aug 2005, Rangesh Kunnavakkam wrote: I have a large vector of around 12597 elements and I wish to calculate p-value for each

Re: [R] converting stata's by syntax to R

2005-08-01 Thread Jean Eid
Here is one way this can be done do.call(rbind, by(dat, list(dat$fam) ,function(x) { + if(NROW(x)1) return(x[which.max(x$wt),]) + else return(x)} + )) and it returns fam wt keep 1 1 1.01 2 2 1.01 3 3 0.61 4 4 0.41 hth, On Mon, 1 Aug 2005, Chris Wallace wrote: I

Re: [R] debian vcd package

2005-07-21 Thread Jean Eid
I just installed it on a Debian 2.6.8.1 and the following R platform i386-pc-linux-gnu arch i386 os linux-gnu system i386, linux-gnu status major2 minor0.1 year 2004 month11 day 15 language R By the way are you using apt-get install vcd. and if so why? just use

Re: [R] plot the number of replicates at the same point

2005-07-13 Thread Jean Eid
You can do the following (don't know it this is the most efficient way but it works) temp-read.table(your file to read the data, header=T) temp1-table(temp) plot(temp$x, temp$y, cex=0) text(as.numeric(rownames(temp1)), as.numeric(colnames(temp1)), temp1) HTH On Wed, 13 Jul 2005, Kerry Bush

[R] write.dta limits

2005-06-06 Thread Jean Eid
Hope everyone id doing great .. Just need some clarification over the limit of write.dta. I have some coauthors that use stata and I need to send them my data in .dta format. the data.frame is 41706x229 and I get the following Error in write.dta(Panel, file = STATADATA/Panel.dta, version = 7) :

Re: [R] write.dta limits

2005-06-06 Thread Jean Eid
did not clarify the system and such ... platform i386-pc-linux-gnu arch i386 os linux-gnu system i386, linux-gnu status major2 minor0.1 year 2004 month11 day 15 language R The foreign package version is 0.8-4 On Mon, 6 Jun 2005, Jean Eid wrote: Hope

Re: [R] issues with identical()

2005-05-21 Thread Jean Eid
Thank you all for pointing out the name of the variables.. I do apologize for not catching that,.. have a good day, Jean On Fri, 20 May 2005, Prof Brian Ripley wrote: On Fri, 20 May 2005, Jean Eid wrote: Hi all, hope you having a nice day, I ahve this weird results with identical

[R] issues with identical()

2005-05-20 Thread Jean Eid
Hi all, hope you having a nice day, I ahve this weird results with identical (probably I am not understanding correctly what it does ...) I have these two data frames and I issue : identical(temp, temp1) [1] FALSE However, these data frames are Nx2 and when I issue: identical(temp[,2],

Re: [R] constrained optimization

2005-05-20 Thread Jean Eid
Why can't you just solve x1 in terms of x2 and plug it in.. ie. min g(const-x2, x2, x3) Jean On Fri, 20 May 2005 [EMAIL PROTECTED] wrote: Hello, I've got to compute a minimization equation under an equality constraint (Min g(x1,x2,x3) with x1+x2=const). The Constroptim function does not

Re: [R] getting the unique values and counts from a vector

2005-05-20 Thread Jean Eid
?table On Fri, 20 May 2005, Wladimir Eremeev wrote: Dear Ravi, From a vector, I want to get the unique values and the counts of these unique values in the vector. For example, x-c(2,1,2,1,4,2,1,4,1,1) try hist(x,plot=FALSE,breask=unique(x))$counts [1] 5 3 0 0 0 2 -- Best regards

Re: [R] non-derivative based optimization and standard errors.

2005-03-24 Thread Jean Eid
and get its expectation and match that to data. I thought of doing a bootstrap but it will take so much time. I guess if this is the only way, then it has to be done. Jean On Wed, 23 Mar 2005, Spencer Graves wrote: Have you considered bootstrap or Monte Carlo? spencer graves Jean Eid

[R] non-derivative based optimization and standard errors.

2005-03-23 Thread Jean Eid
Hi AlL, I ahve this problem that my objective function is discontinous in the paramaters and I need to use methods such as nelder-mead to get around this. My question is: How do i compute standard errors to a problem that does not have a gradient? Any literature on this is greatly appreciated.

Re: [R] How I calculate nCr with R ? (Como calculo nCr con R? )

2005-03-19 Thread Jean Eid
do you mean n choose k which is a built in function see ?choose On Sat, 19 Mar 2005, Mario Morales wrote: En español (In Spanish) Necesito calcular la en numeros de combinaciones de n cosas tomando k al tiempo. Como hago eso en R ??? Yo escribí mi propia función pero pienso que de

Re: [R] ESS

2005-03-08 Thread Jean Eid
try and read the ess manual a bit and look at the folowing reference card http://stat.ethz.ch/ESS/refcard.pdf On Tue, 8 Mar 2005, Mahdi Osman wrote: Hi all, I have got a dataframe in coma delimted text format. My ESS and R processes are working well and active. I can read R help files and

[R] large data set, and RDBMS

2005-02-23 Thread Jean Eid
I have this somewhat large data set that is given to me in a fixed width format. The file itself is already 100MB (Maybe R can actually handle this but I am trying to gain some experience in postgres and RODBC). I am using postgres to preprocess the file and connect to the database through the

Re: [R] Problems installing quantreg

2005-02-19 Thread Jean Eid
I have the same problem as well. I installed atalas3-sse2 and still hasd the same problem. Here's the log of messages * Installing *source* package 'quantreg' ... ** libs g77 -fPIC -g -O2 -c akj.f -o akj.o g77 -fPIC -g -O2 -c boot.f -o boot.o g77 -fPIC -g -O2 -c boundc.f -o boundc.o g77

Re: [R] sample

2005-02-11 Thread Jean Eid
that is because your first object is a data.frame but when you transposed it you turned it into a matrix. so doing mat1 - data.frame(matrix(rnorm(20*1532), ncol=20)) mat2 - t(mat1) dim(sample(mat1, 5, replace=T)) [1] 15325 dim(sample(mat2, 5, replace=T)) NULL length(sample(mat2, 5,

Re: [R] sample

2005-02-11 Thread Jean Eid
It seems that sample picks columns when the object is turned into a data.frame. I do not knoe why it is doing that Is this something that was meant and not documented or something? Jean On Fri, 11 Feb 2005, Adaikalavan Ramasamy wrote: See below. On Thu, 2005-02-10 at 14:53 -0800, T.

Re: [R] Double sort a data frame

2005-02-11 Thread Jean Eid
?order On Fri, 11 Feb 2005, Luis Ridao Cruz wrote: R-help, Long ago I asked how to sort a data frame according to one of the columns. But Iwas wondering ho I could double sort , i.e, sort according to one column and another one afterwards. It is quite easy in Excel but I am unable to

[R] loess problems

2005-02-05 Thread Jean Eid
I have a problem either understanding what loess is doing or that loess has a problem itself. As the x-axis variables become more concentrated on a particular point,the estimated loess tends to zero. the examples below show what i am talking about, why is that? my intution tells me that it

Re: [R] How to convert a list to a matrix

2005-02-03 Thread Jean Eid
list1 - list(x=c(1,2), y=c(3,4), z=c(4,5)) matrix(unlist(list1), nrow=length(list1), byrow=T) HTH On Thu, 3 Feb 2005, michael watson (IAH-C) wrote: Hi Sorry to ask such a basic question. I have a list, each element of which is a vector of two values. What I actually want is a matrix with

Re: [R] Runnning R remotely

2005-02-02 Thread Jean Eid
Why do you use png? I think that yu need X11 to save a png file. why not use a postscript? This is what ?png says R can be compiled without support for either or both of these devices: this will be reported if you attempt to use them on a system where they are not supported. They will not be

Re: [R] Runnning R remotely

2005-02-02 Thread Jean Eid
LS2 9JT tel: +44 113 343 1596 fax: +44 113 343 6716 mail: [EMAIL PROTECTED] On Wed, 2 Feb 2005, Jean Eid wrote: Why do you use png? I think that yu need X11 to save a png file. why not use a postscript? This is what ?png says R can be compiled without support for either

Re: [R] a nls question

2005-02-02 Thread Jean Eid
as.vector(coef(nlsobj)) as.vector(resid(nlsobj)) On Wed, 2 Feb 2005, Chung Chang wrote: Hi, I have a question about how to get the residuals and estimations of the parameters in my program. For example, x-c(1,2,3,4,5,6) y-c(2.9, 1.24, 1.71, 2.989358, 1.455979, 1.4) nls(y ~

[R] trellis graphics in loops

2005-01-30 Thread Jean Eid
I have this awkward problem with trellis (lattice). I am trying to generate some plots through loops but the .eps file is empty. When I generate them in a list and print them outside the loop all is fine. this is an example below:( nothing shows up in foo.eps, but all show up in foo1.eps) R

Re: [R] reshape (a better way)

2005-01-26 Thread Jean Eid
reshape(XX, direction=long, varying=list(c(one1, one2, one3), c(two1, two2, two3)), v.names=c(one, two), times=c(1, 2, 3)) # I get the correct output. I there a way not to generate the XX$two3 above Thank you Jean On Wed, 26 Jan 2005, Thomas Lumley wrote: On Wed, 26 Jan 2005, Jean

[R] multi line comment

2005-01-25 Thread Jean Eid
Hi, Are there any plans to do multi line commenting? like /*...*/ Jean __ R-help@stat.math.ethz.ch mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide! http://www.R-project.org/posting-guide.html

Re: [R] How to replace slashes with back slashes

2005-01-19 Thread Jean Eid
try sink(filename) cat(paste(gsub('/', '', 'c:/dir1/dir2/file.ext'),\n,gsub('/', '', 'c:/dir1/dir2/file.ext'),\n )) sink() the idea is to use cat, instead of paste you can do a for loop where you cat the string into the sinked file On Wed, 19 Jan 2005, Joerg Klausen wrote: Dear

[R] C-c C-c and tcltk cause R to get a segmentation fault

2005-01-17 Thread Jean Eid
when tcltk is called and a C-c C-c is issued a message of Illegal instruction is issued and the R process is killed. To reproduce please do the following require(tcltk) C-c C-c It will say Illegal instruction I use a debian 2.4 kernel with R 2.0.1 tcltck version 2.0.1. I use tcltk to have gui

Re: [R] Union of list elements

2004-12-18 Thread Jean Eid
Can't you turn the lists into data frames issue unique and force them back to lists. Here's the code: L - list(c(a1,a3,a4), c(a1,a4,a5), c(a1,a5,a6)) M - list(c(a1,a3,a4), c(a2,a4,a5), c(a1,a5,a6), c(a7, a1, a4)) LL - as.data.frame(I(L)) MM - as.data.frame(I(M)) X -

RE: [R] Returning to normal after call to layout()

2004-12-10 Thread Jean Eid
Here's tow examples that do what you want (the way I understand them). layout(matrix(c(1,0,1,0), byrow = TRUE)) plot(10:100) par(xpd=NA) co - par(usr) legend(co[1], -10, legend=c(Hello long time no see,\n , and My day was great,\n, How was yours), text.width=95, col=red,, text.col=c(red,blue,

RE: [R] finding the most frequent row

2004-12-10 Thread Jean Eid
You can do the following also X - matrix(c(1,2,1,2,1,3,1,4), ncol=2) Y-unique(X) Y[which.max(apply(Y, 1,function(i) sum(apply(matrix(1:nrow(X)), 1,function(x) identical(X[x,], i[1:2]),] I do not know what your strategy is when there are multiple maxima i.e two different rows appear at

Re: [R] multinomial probit

2004-12-03 Thread Jean Eid
I think the polr is in MASS and indeed has a probit method. Jean, On Fri, 3 Dec 2004, Charlie Sprenger wrote: Hello All, I'm trying to run a multinomial probit on a dataset with 28 data points and five levels (0,1,2,3,4) in the latent choice involving response variable. I downloaded the

Re: [R] Relative subscripting

2004-11-30 Thread Jean Eid
wouldn't it be return[2:NROW(return)]*marketcap[1:(NROW(return)-1)] (note that return is also a function in R so maybe you should stay away from calling your variable return. Anyways if you have a data frame you can add another variable to it but attach an NA to the first element (since you are

Re: [R] Combined variable names

2004-11-30 Thread Jean Eid
see ?assign and ?get i,e instead ob blank below have something like assign(paste(v, i, sep=), a[i:N]) and if you need to loop over calling them say get(paste(v, i, sep=)) of course typing v1 will call the variable... Jean On Tue, 30 Nov 2004, Tobias Muhlhofer wrote: I am trying to define a

Re: [R] how to get to interesting part of pattern match

2004-11-18 Thread Jean Eid
sub(.*/, , abc/foo) [1] foo Jean On Thu, 18 Nov 2004, Vadim Ogranovich wrote: Hi, I am looking for a way to extract an interesting part of the match to a regular expression. For example the pattern [./](*.) matches a substring that begins with either . or / followed by anything. I am

Re: [R] Logical and

2004-11-11 Thread Jean Eid
You can use setdiff if you only need the unique values of a that are not in b. If you want all values you can use a[a%in%setdiff(a,b)] There are also intersection, union etc... see ?setdiff On Thu, 11 Nov 2004, Alexander Sokol wrote: Hello, I have the following very simple problem: Say I

Re: [R] polr probit versus stata oprobit

2004-11-11 Thread Jean Eid
Now I understand, R gives numbers zero to about 6 digits and Stata gives zero to about 30 digits. The intercepts are the same in both packages. Thank you, Jean, On Thu, 11 Nov 2004, Thomas Lumley wrote: On Thu, 11 Nov 2004, Jean Eid wrote: Thank you Thomas for your answer

[R] polr probit versus stata oprobit

2004-11-10 Thread Jean Eid
Dear All, I have been struggling to understand why for the housing data in MASS library R and stata give coef. estimates that are really different. I also tried to come up with many many examples myself (see below, of course I did not have the set.seed command included) and all of my `random'

Re: [R] polr probit versus stata oprobit

2004-11-10 Thread Jean Eid
Dear Thomas, Where you also able to replicate the second example? (the exaample that I turned the housing data into numerical variables) That is the one that my estimates differ. Jean, On Wed, 10 Nov 2004, Thomas Lumley wrote: On Wed, 10 Nov 2004, Jean Eid wrote: Dear All, I have been

[R] bquote inside a legend

2004-10-22 Thread Jean Eid
I am trying to automate an outide of the plot region table that has the correlation coef. of the various variables in the plot. I am currently using bquote to get the greek/latex representation of $\rho$. what I want so what I have is the following rhoa - cor(x, data1$No.Msa.Hosp) rhon -

Re: [R] densityplot and histogram

2004-10-21 Thread Jean Eid
: On Tuesday 19 October 2004 17:12, Jean Eid wrote: Is there any function like par(new=T) for lattice. I want to plot a histogram in percentages on the right hand side and also superimpose the densityplot with its density scale on the lhs. so far I am only able to do this histogram( temp[,2]~ temp

Re: [R] densityplot and histogram

2004-10-21 Thread Jean Eid
I figured out both questions,.. The idea is to set them with trellis.par.set(). However, I still would like to know if there is a tutorial for lattice package. Jean, On Thu, 21 Oct 2004, Jean Eid wrote: Deepayan, Thank you so much,... works like a charm. However, I have two more questions

Re: [R] Changing the Y graph scale Maximum value.

2004-10-19 Thread Jean Eid
If I understand you correctl, you just want to call the point of (0,10) to be (0,6). if so have a look at text() function text(0,10, pos=2) or something like that will do. The reason why you are getting the error because your 0:10 vector is larger than 0:6 vector. Hope this helps, P.S. why are

[R] densityplot and histogram

2004-10-19 Thread Jean Eid
Is there any function like par(new=T) for lattice. I want to plot a histogram in percentages on the right hand side and also superimpose the densityplot with its density scale on the lhs. so far I am only able to do this histogram( temp[,2]~ temp[,1],nint=100,type=desnity, xlab =

[R] tclk, tcltk

2004-10-12 Thread Jean Eid
I have been having problems with these two 'libraries' since I installed 2.0.0. I have built a package with couple of functions so that I can load it at startup every time R is booted. The problem is that I have the following error every time I call the library Loading required package: tclk

Re: [R] tclk, tcltk

2004-10-12 Thread Jean Eid
: tclk in a DESCRIPTION file for one of your packages. On Tue, 12 Oct 2004, Jean Eid wrote: I have been having problems with these two 'libraries' since I installed 2.0.0. I have built a package with couple of functions so that I can load it at startup every time R is booted. The problem

[R] R-2.0.0 and tcltk package

2004-10-09 Thread Jean Eid
there does not seem to be a package tcltk on CRAN for 2.0.0. I have successfully installed the same package for 1.9.1. In essence I require the package for a GUI interface to setwd. All work fine with 1.9.1. This is on a Linux Debian unstable kernel 2.4.20 The build version of R 2.0.0 (issuing

[R] dataload for linux

2004-10-01 Thread Jean Eid
Is there a dataload utility for linux. The link in genstat is down but I managed to find the utility at: http://gurukul.ucc.american.edu/econ/gaussres/UTILITYS/DATALOAD.HTM but this is a dos/windows version. Thank you Jean __ [EMAIL PROTECTED]

[R] gsub

2004-09-23 Thread Jean Eid
to delete all characters before a particular pattern. If anyone has some help file for this, it will be greatly appreciated. Jean Eid __ [EMAIL PROTECTED] mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide! http

Re: [R] gsub

2004-09-23 Thread Jean Eid
Thank you all for the help, specially Gabor that is exactly what I needed. A few examples that do the same thing is very helpful in understanding the structure of the call. Thank you again, Jean On Thu, 23 Sep 2004, Gabor Grothendieck wrote: Jean Eid jeaneid at chass.utoronto.ca writes

Re: [R] speeding up functions for large datasets

2004-08-06 Thread Jean Eid
you might want to turn your data into a matrix. You get much much faster for loops doing that. Jean, On Fri, 6 Aug 2004 [EMAIL PROTECTED] wrote: Dear R-helpers, I'm dealing with large datasets, say tables of 60 000 times 12 or so, and some of the functions are (too ) slow and I'm therefore

[R] legend under plot region?

2004-07-30 Thread Jean Eid
I am trying to put legends underneath the plot (in the outer margins). Is there an easy way to do this. I have been tinkering with split..screen but I could not make it work. Thank in advance Jean __ [EMAIL PROTECTED] mailing list

Re: [R] cannot print/save graphics.

2004-07-30 Thread Jean Eid
You have to have postscript(foo.eps, ..) before you issue the plot commands and isuue a dev.off() at the end. If you want to copy the plot graph to a postscript driver use dev.copy2eps(file=foo.eps) ?dev.print ?postscript Hope this helps. On Fri, 30 Jul 2004, marzban wrote: Hi, I'm

[R] System memory

2004-07-05 Thread Jean Eid
, it will crash and on reboot it will check the disk for errors. I have also used gc() after I removed everything in the env. This did not make a difference. can someone guide me through a solution. Thank you Jean Eid University of Toronto. __ [EMAIL

[R] cameraa rotation graphics

2004-06-03 Thread Jean Eid
you Jean Eid __ [EMAIL PROTECTED] mailing list https://www.stat.math.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide! http://www.R-project.org/posting-guide.html

Re: [R] Debian R

2004-05-18 Thread Jean Eid
I have done that with no problems... Jean, On Tue, 18 May 2004 [EMAIL PROTECTED] wrote: I use linux debian testing for which the latest debianized version of R is 1.8.1. Therefore I installed: r-base-core_1.8.1-0.cran.1_i386.deb r-base-dev_1.8.1-0.cran.1_all.deb

[R] numericDeriv

2004-04-28 Thread Jean Eid
Dear All, I am trying to solve a Generalized Method of Moments problem which necessitate the gradient of moments computation to get the standard errors of estimates. I know optim does not output the gradient, but I can use numericDeriv to get that. My question is: is this the best function to do

Re: [R] numericDeriv

2004-04-28 Thread Jean Eid
something better, but this has produced acceptable answers for me in several cases, and I did not push it beyond that. hope this helps. Jean Eid wrote: Dear All, I am trying to solve a Generalized Method of Moments problem which necessitate the gradient of moments computation to get

Re: [R] RODBC installation in debian

2004-04-22 Thread Jean Eid
I just did this yesterday. you do not have an ODBC driver ( as it says in the log). you need to (as root) use apt-get install unixodbc and apt-get install unixodbc-dev. The unixodbc package alone will not work, you need to install unixodbc-dev (development), Hope this helps. I have a question

Re: [R] fill up a matrix

2004-04-22 Thread Jean Eid
you can do this, tmpmatrix - matrix(unlist((lapply(as.data.frame(x[, 3:ncol(x)]), function(t) return(rep(t[!is.na(t)], 9))) )), byrow=F, ncol=8) matrix - cbind(matrix[, 1:2], tmpmatrix) On Thu, 22 Apr 2004, Luis Rideau Cruz wrote: Hi all, I want to fill in this matrix vectors (by column)

[R] percentile-percentile plot

2004-04-06 Thread Jean Eid
Hi, Is there a function that does percentile-percentile plot. I do not mean the qqplot. I need to plot the percentiles rather than points themselves. I am hoping for a plot that tells me that the x percentile of one data set corresponds to the y percentile of the other. for example a point on

Re: [R] percentile-percentile plot

2004-04-06 Thread Jean Eid
Thank you Duncan, On Tue, 6 Apr 2004, Duncan Murdoch wrote: On Tue, 6 Apr 2004 13:33:58 -0400, Jean Eid [EMAIL PROTECTED] wrote : Hi, Is there a function that does percentile-percentile plot. I do not mean the qqplot. I need to plot the percentiles rather than points themselves. I am

[R] DataEntryWindow

2004-03-30 Thread Jean Eid
When I originally posted my question under ( C-c C-c does not kill data editor), I thought that it was a problem with ESS rather than R. However, I have tried to do the same from a command line R (R 1.8.1 (2003-11-21). on a debian testing i386 machine) and I got the same problem. Specifically I

[R] XEMACS, ESS, on Debian

2004-03-25 Thread Jean Eid
Dear all, This might not be the best place to post this (maybe the ESS help is better) but I will try anyways. I am running ESS, Xemacs, R 8.1 on a debian testing dist (i386 arch). when I envoke the edit(data) command, a data editor appears and all is fine. However executing C-c C-c will only

Re: [R] no subject

2004-02-24 Thread Jean Eid
I don't know what these files are. so depending on whether you want to call them with 400 different names or just have one data set for the 400 files. but in either case you can do a for loops on the directory. i.e. put the 400 files in a seperate directory and setwd(to that directory) do this

Re: [R] quesion on diag of matrix

2004-02-23 Thread Jean Eid
sum(diag(X)) On Mon, 23 Feb 2004, li xian wrote: How to get the sum of the diag of matrix? Thanks! - [[alternative HTML version deleted]] __ [EMAIL PROTECTED] mailing list

[R] lines and dates

2004-02-04 Thread Jean Eid
Dear All, I have the following data.frame `data.frame': 1563 obs. of 4 variables: $ Model :Class 'AsIs' chr [1:40] Astro Astro Astro Astro $ Make :Class 'AsIs' chr [1:40] Chevrolet Chevrolet $ Production : num 11219 12384 1082 5409 5458 ... $ date :`POSIXlt', format:

[R] subsetting objects

2003-10-09 Thread Jean Eid
I want to be able to exctract a matrix from a data frame that contains repeated measurements for individuals. i.e I want to exctract the second observation for each individual in the study. Is there a way of doing this? I guess what I am trying to ask is if there as a multidimensional version

[R] residual lag scatter plot

2003-10-08 Thread Jean Eid
Dear all, I am looking for a function that can scatter plot the residuals obtained from a longitudinal model i.e. plot e_{i,j} e_{i,k} for all j k = 1,..n ( I have 7 observations for each subject). something similar to the pairs() function. I can do it the long way by constructing a residual

[R] ksmooth in SPLUS vs R

2003-09-22 Thread Jean Eid
I am working with a model that I have to estimate a nonparametric function. The model is partial linear i.e. Y=X$\beta$ + f(z) + $\epsilon$ I am using the ' double residual methods' Robinson (1988) Speckman (1988) where I estimate a nonparametric function for each of the parametric variables in

Re: [R] ksmooth in SPLUS vs R

2003-09-22 Thread Jean Eid
Please do forget my questions as they are really trivial and I do not kno what I was thinking of. Thank you thomas for clarifying my cloudy head today. jean, On Mon, 22 Sep 2003, Jean Eid wrote: I am working with a model that I have to estimate a nonparametric function. The model is partial

[R] coef names in lm

2003-09-10 Thread Jean Eid
the xtable library to turn output into latex tables and do not want to manually delete each and every single design word in the coefficients name vector. Thank you so much for any feedback, Jean Eid __ [EMAIL PROTECTED] mailing list https

[R] readline and R

2003-07-08 Thread Jean Eid
to change the configure file without making sure I am doing the right thing, Any help is appreciated, Jean Eid __ [EMAIL PROTECTED] mailing list https://www.stat.math.ethz.ch/mailman/listinfo/r-help

Re: [R] readline and R installation

2003-07-08 Thread Jean Eid
: Martin Maechler [EMAIL PROTECTED] To: Jean Eid [EMAIL PROTECTED] Cc: [EMAIL PROTECTED] Sent: Tuesday, July 08, 2003 12:04 PM Subject: Re: [R] readline and R installation One way is setting the (or adding to an existing one) environment variable LD_LIBRARY_PATH to your directory (.../local/R

[R] lm diagnostics and qr (fwd)

2003-06-26 Thread Jean Eid
I have been struggling to find some informaation on what lm exactly does. I know it uses the QR decomp. However, I was recently faced with a somewhat badly scaled matrix and summary(lm) said Coefficients: ( 4 not defined because of singularities) does anyone know how lm chooses these 4

Re: [R] more efficient sum of matrix columns

2003-06-15 Thread Jean Eid
NA NA Jean does make reference to summing parts of a matrix, apparently in a loop, so it might help to know what's being done besides the column sums. Regards, John At 09:18 PM 6/14/2003 -0400, Jonathan Baron wrote: On 06/14/03 20:51, Jean Eid wrote: Dear R users, I am looking

[R] more efficient sum of matrix columns

2003-06-14 Thread Jean Eid
* 202 matrix. thanks, Jean Eid __ [EMAIL PROTECTED] mailing list https://www.stat.math.ethz.ch/mailman/listinfo/r-help

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