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ONLINE COURSE – Missing Data Analytics (MDAR01) This course will be
delivered live
https://www.prstatistics.com/course/online-course-missing-data-analytics-mdar01
8 September 2021 - 10 September 2021
TIME ZONE – Western European Time – however all sessions will be
recorded and made available all
Hello Omar,
This doesn't seem particularly ecology-related, but I'll give you the
same answer you're likely to get on any other list.
R is Open Source, and has a vibrant user community. That means that
the best way for you to have your code incorporated into R is to write
a package, and contribut
Hi, I am Omar Maghawry Ibrahim. I am a professor of crop science at SRTA
City, Egypt. I developed a new method to compute relative importance of
inputs in neural networks. I wrote a code in visual basic for this method
and I published it in a paper in 2013. It produces more accurate results
than O
Dear members greetings!!!
I've been struggling with vegan ordination diagram.
I've made NMDS sample plot with variable sized bubbles as species abundance
score. I want to vector fit via envfit environmental variables of both
categorical as well as quantitative environmental variables on that bubble
Hi all,
As I use ggplot2 for all my graphs, I would like to use ggplot2 to
construct rarefaction curves as well (I also want to combine 2 rarefaction
curves in 1 plot using cowplot which also vows for using ggplot2).
I made these rarefaction curves using the rarecurve function in vegan, but
I don
Dear All,
Thanks for your continuous support and guidance through this forum. This
time, I have a query regarding errors in 'nlsem' package, which reads as
follows:
Error in if (abs(ll.old - ll.new) < convergence) run <- FALSE :
missing value where TRUE/FALSE needed
This errors comes after us
You can unsubscribe yourself at the link in the footer of every
message to this list:
https://stat.ethz.ch/mailman/listinfo/r-sig-ecology
If you are having trouble getting help on this list, though, you might
benefit from taking a look at the general R-help list information,
including the general
Nobody answer me when I ask something, but I always answer your question.
Could u please take off my name of this email?
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Dear All
I could solve my problem by reinstalling latest version of R .
Best Regards
Rajendra M Panda
School of Water Resources
Indian Institute of Technology Kharagpur
On 18 August 2016 at 14:00, Rajendra Mohan Panda
wrote:
> Dear All
>
> I have used following codes for installing 'caret' pa
Dear All
I have used following codes for installing 'caret' package in r
install.packages("C:/Users/RMP/Downloads/caret_6.0-71.zip",repos = NULL,
type="source")
install.packages("caret", dependencies = TRUE)
I get following message:
package ‘caret’ successfully unpacked and MD5 sums checked
Th
--
Beniamino Caputo, PhD
Parasitology Unit
Department of Public Health & Infectious Diseases
Università di Roma "La Sapienza"
Piazzale Aldo Moro, 5
00185 Rome, Italy
Tel. +39 06 4991 4558
Fax. +39 06 4991 4653
E-mail: beniamino.cap...@uniroma1.it
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IN
Thanks a lot to forum members
Please find the error with Matrix package
Installed Matrix package could not be imported to R even after R update and
caret package reloading. I get following error:
Warning in install.packages :
cannot open compressed file 'Matrix_1.2-5 (3)/DESCRIPTION', probable r
Dear Viewers
I find following error after updating R and reloading caret
Error : Function found when exporting methods from the namespace ‘Matrix’
which is not S4 generic: ‘as.vector’
In addition: Warning message:
package ‘caret’ was built under R version 3.3.0
Error: package or namespace load fa
Dear viewers
I get following error while I import "caret " package into RStudio. I have
imported all required packages beforehand I try this. I have tried the
following two options also, but failed to import the "caret" package:
install.packages("caret", repos=c("http://rstudio.org/_packages";, "
Thanks a lot for your prompt reply. Some clues provided by you may work.
Let me see.
Best Regards
Rajendra M Panda
School of Water Resources
Indian Institute of Technology Kharagpur
On 6 October 2015 at 13:06, Thierry Onkelinx
wrote:
> Your model is probabily too complex for your data. try to
Your model is probabily too complex for your data. try to simplify the
model (or get more data).
ir. Thierry Onkelinx
Instituut voor natuur- en bosonderzoek / Research Institute for Nature and
Forest
team Biometrie & Kwaliteitszorg / team Biometrics & Quality Assurance
Kliniekstraat 25
1070 Anderl
Dear All
I get following error in some of my datasets while using VGAM package.
Error in backsolve(Rmat, rinv) :
singular matrix in 'backsolve'. First zero in diagonal [1057]
Kindly advise how to tackle this error.
My formula reads like this: vgam(cbind(list of species)~s()+s(),
binomialff(mu
Hello.
I used chclust() in package "rioja" for constrained cluster , it sounds like
the function bstick() can help me confirm the number of clusters. However ,
even after read the documents I'm still puzzled , let's make it easy, I wonder
whether it's the points near the two lines converged.
Tha
Thank you for these explanations. If I put strata=site, this means that for
each site my dissimilarity matrix of year 1 and year 2 will be permuted and the
observed
changes compared to these random permutation? Adding site as a fixed factor
then ensure that I am testing changes in time site by
http://sitedown.fr/wp-content/uploads/fgallery/otwla.html
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Hi Nils,
On Wed, Jun 27, 2012 at 10:16 AM, Nils Gülzow wrote:
> hey Sarah,
>
> thanks for your good advice, I will add the information (actual code and
> error message) but I didn´t get what you mean with
> dput(), so how can I make my data available for the list?
> Sorry I am Nooby here ;-)
Ple
Hi Nils,
Please use dput() to provide your data, and include the actual code
and error messages. I assume you actually mean the ez package? It's
important to provide a full explanation of the problem so that someone
can offer good advice.
Sarah
On Wed, Jun 27, 2012 at 9:56 AM, "Nils Gülzow" wro
Dear List,
I have a problem with the ezANOVA package using for rm ANOVA or a problem with
my statistic design of the experiment. (or both ;-))
My file looks like this (is also attached):
sample daystreatments repl. dispersal gbiov/rich/evenness
1-367,14,21 synchron
http://www.happytripper.com/blog/wp-content/themes/bwdec/body.html
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Dear R-sig-ecology group,
Â
I have a question about trend surface analysis TSA Â and the way to simplify
polynomials.
I searched in literature but could not find any clear indication.
Assuming a trend surface based on a polynomial of 2nd order like this:
Model A:  Z ~  β0 +  β1 x  + Â
hi all groups
in calculate correlation ,i received this message:
> cor.test(depth,abundance,method="spearman")
Spearman's rank correlation rho
data: depth and abundance
S = 76554.61, p-value = 0.03969
alternative hypothesis: true rho is not equal to 0
sample estimates:
rho
0
On Mon, 2011-10-17 at 15:33 +0200, Kerstin Kober wrote:
> Hi,
> This is a question from an R-newby!
> I’ve got a very extensive data set and will need to run a large number of
> Mann-Whitney U tests (in R: wilcox.test) between several sets of data. I am
> trying to automate this as far as possib
Hi,
This is a question from an R-newby!
I’ve got a very extensive data set and will need to run a large number of
Mann-Whitney U tests (in R: wilcox.test) between several sets of data. I am
trying to automate this as far as possible so I won’t need to run each test one
by one. I asked already s
On 01/28/2011 09:18 AM, Sven Adler (2) wrote:
> "I never
> understood why people would test for spatial autocorrelation, as
> non-significant autocorrelation will only indicate that the sample size
> is small."
>
> Maby it is here the wrong place (r-sig-geo) but it is an important question
>
Dear Chris, Dear Edzer,
in mgcv you can include a correlation structure like
correlation=corExp(form=~X+Y) as corGaus works too (you have to use the gamm
function). I have compared for several data sets the performance of kirgging
and gam and so far I hav't found
significant differences between
Hi Manuel,
I am guessing the problem is that because you have categorical
predictors,
you are getting empty cells in your cross validation sets, and hence
infinite coefficients.
Unfortunately, you are now in a very tricky situation, to get at the
generalization error of your
model you need to have
Hi,
Just to add a note to the good advice you have gotten so far. Redundancy
Aanalysis (RA) is a linear
method, as Jari explained. If you apply transformations until your data
conform to the assumptions of RA and then do RA, you are no longer
applying a linear method.
You will get back a configura
Hello,
I would like to post a message, but I was wondering if I had to subscribe first?
Here is my message:
II performed over the seanson a census of butterflies on 8 sites . I have for
each date un number of individuals and of species. I would like to know which
function I could use to test if s
Hello Roy,
> Could anyone shed any information on why the area of home ranges as
> estimated in adehabitat can be several times higher when the kernelUD \
> kernel.area functions are used compared to estimates from the mcp
> function. I would have expected them to be roughly the same, rather
> th
Hi,
Mark Taper, Subhash Lele, and I organized an ESA invited session around
this topic
at the 98? ESA meeting in Baltimore MD. Which resulted in
Mark L. Taper and Subhash R. Lele (eds): The Nature of Scientific
Evidence: Statistical, Philosophical, and Empirical Considerations
University of Chic
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