Re: [R-SIG-Mac] [Caution: Message contains Suspicious URL content] R 3.0.1 build from sources: Wrong library paths

2013-09-13 Thread Anirban MUKHERJEE
Hi Simon, On a related note, there has been progress on openmp in llvm/clang: http://www.phoronix.com/scan.php?page=news_itempx=MTQ0NjQ http://lists.cs.uiuc.edu/pipermail/llvmdev/2013-August/065169.html http://clang-omp.github.io/ That might be an alternative route to consider if needed.

Re: [R-SIG-Mac] R 3.0.1 build from sources: Wrong library paths

2013-09-13 Thread Simon Zehnder
Berend, I retried the command pdflatex without the extra export and it does not work. Assumably, this is due to the fact, that I had /usr/local/bin and /usr/local/sbin in my PATH variable and I used export PATH=/usr/bin:/bin:/usr/sbin:/sbin to get it out of my PATH (inside my .profile file).

Re: [R-SIG-Mac] [Caution: Message contains Suspicious URL content] R 3.0.1 build from sources: Wrong library paths

2013-09-13 Thread Prof Brian Ripley
On 13/09/2013 07:52, Anirban MUKHERJEE wrote: Hi Simon, On a related note, there has been progress on openmp in llvm/clang: http://www.phoronix.com/scan.php?page=news_itempx=MTQ0NjQ http://lists.cs.uiuc.edu/pipermail/llvmdev/2013-August/065169.html http://clang-omp.github.io/ That might be

Re: [R-SIG-Mac] R on Mac: framework or homebrew?

2013-09-13 Thread Rainer M Krug
Prof Brian Ripley rip...@stats.ox.ac.uk writes: On 12/09/2013 17:15, MacQueen, Don wrote: I've been using R on OS X probably ever since there was an R on OS X, and like you I use it from the command line. In the early days I installed R from sources, but quite a few years ago I switched to

Re: [R-SIG-Mac] [Caution: Message contains Suspicious URL content] R 3.0.1 build from sources: Wrong library paths

2013-09-13 Thread Simon Zehnder
Dear Brian, if it is able to test the compilation of the quartz device by calling quartz() in R - this works. Calling xcodebuild -version gives me: Xcode 4.6.3 and clang --version gives me LLVM 3.2svn indeed. My prime target was to be able to use OpenMP 3.1 which is actually only available

Re: [R-SIG-Mac] [Caution: Message contains Suspicious URL content] R 3.0.1 build from sources: Wrong library paths

2013-09-13 Thread Prof Brian Ripley
On 13/09/2013 11:16, Simon Zehnder wrote: Dear Brian, if it is able to test the compilation of the quartz device by calling quartz() in R - this works. Calling xcodebuild -version gives me: Xcode 4.6.3 and clang --version gives me LLVM 3.2svn indeed. My prime target was to be able to use

Re: [R-SIG-Mac] [Caution: Message contains Suspicious URL content] R 3.0.1 build from sources: Wrong library paths

2013-09-13 Thread Simon Urbanek
On Sep 13, 2013, at 6:16 AM, Simon Zehnder wrote: Dear Brian, if it is able to test the compilation of the quartz device by calling quartz() in R - this works. Calling xcodebuild -version gives me: Xcode 4.6.3 and clang --version gives me LLVM 3.2svn indeed. My prime target was to be