Re: [R-SIG-Mac] Oops --- still have problems building R from source.

2010-05-27 Thread Rolf Turner
On 28/05/2010, at 2:56 AM, Berend Hasselman wrote: SNIP (R. T.): Wound up getting: . . . gcc -arch x86_64 -std=gnu99 -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -single_module -multiply_defined suppress -L/usr/local/lib -o R_X11.so

Re: [R-SIG-Mac] Oops --- still have problems building R from source.

2010-05-27 Thread Rolf Turner
searching for a needle in a haystack trivial by comparison. Thanks again for getting my problem sorted. cheers, Rolf Turner ## Attention: This e-mail message is privileged and confidential. If you

Re: [R-SIG-Mac] Oops --- still have problems building R from source.

2010-05-25 Thread Rolf Turner
make: *** [R] Error 1 So somehow it is still looking for /sw even though I moved /sw aside and took the call to the init script out (of my .cshrc, actually). Any other ideas? Sorry for all the bother. cheers, Rolf Turner P. S. Moreover, having moved /sw to /sw.local, I

Re: [R-SIG-Mac] Problem with readline when building R from source.

2010-05-24 Thread Rolf Turner
On 24/05/2010, at 6:59 PM, Prof Brian Ripley wrote: SNIP ... I actually use tcsh, so I did the equivalent tcsh thing: setenv F77 gfortran -arch x86_64 setenv FC gfortran -arch x86_64 But the documented way is to put these in a config.site file: and yes, it is in the

Re: [R-SIG-Mac] Problem with readline when building R from source.

2010-05-24 Thread Rolf Turner
Further to my previous email: On 24/05/2010, at 6:59 PM, Prof Brian Ripley wrote: SNIP This one is probably that mentioned in the the R-admin manual for Snow Leopard, to wit 'Another quirk is that people have found that the X11 libraries are not in the default linking path, so

[R-SIG-Mac] Oops --- still have problems building R from source.

2010-05-24 Thread Rolf Turner
make: *** [R] Error 1 Anyone have any ideas as to what I need to do to o'erleap *this* hurdle? Ta. cheers, Rolf Turner ## Attention: This e-mail message is privileged and confidential. If you

Re: [R-SIG-Mac] Problem with readline when building R from source.

2010-05-23 Thread Rolf Turner
On 22/05/2010, at 2:23 PM, Ben Madin wrote: Rolf, Given the weekend status, I'll hazard a guess that you want to add these as environment variables, so in an attempt to be monosyllabic: Assuming that you are using the bash shell (which has been the default for a while) log in as the

[R-SIG-Mac] Problem with readline when building R from source.

2010-05-20 Thread Rolf Turner
can fix the ``headers/libs are not available'' problem? I.e. how do I make the ``headers/libs'' available? I ***would*** like to be able to build R from source, just as a fallback. Ta. cheers, Rolf Turner P. S. My OS is Mac OS X 10.6.3. The screen output from configure

Re: [R-SIG-Mac] Problem with readline when building R from source.

2010-05-20 Thread Rolf Turner
On 21/05/2010, at 12:55 PM, Simon Urbanek wrote: On May 20, 2010, at 8:33 PM, Rolf Turner wrote: I (just now) attempted to build an older version of R (2.10.1) from source. The ./configure step came to a halt with an error: configure: error: --with-readline=yes (default) and headers

Re: [R-SIG-Mac] Problem with readline when building R from source.

2010-05-20 Thread Rolf Turner
On 21/05/2010, at 1:46 PM, Simon Urbanek wrote: Rolf, you have broken fink is /sw -- remove it (or move aside) and all should be well :) Psigh. I'm sure this is getting tedious for you ... but where else can I turn? I did: cd /sw sudo mv

Re: [R-SIG-Mac] Problem with readline when building R from source.

2010-05-20 Thread Rolf Turner
On 21/05/2010, at 4:26 PM, Berend Hasselman wrote: On 21-05-2010, at 04:20, Rolf Turner wrote: On 21/05/2010, at 1:46 PM, Simon Urbanek wrote: Rolf, you have broken fink is /sw -- remove it (or move aside) and all should be well :) Psigh. I'm sure this is getting

Re: [R-SIG-Mac] The libpng12.0.dylib hoo-hah.

2010-05-06 Thread Rolf Turner
Dear Ben, Thanks for your email. I guess I'll try the OS upgrade as you suggested, unless I get other suggestions in the near future. I fear and tremble at thought however. Something is sure to go wrong (Murphy's Law being what it is). cheers, Rolf

Re: [R-SIG-Mac] shell.exe() equivalent?

2010-03-25 Thread Rolf Turner
On 26/03/2010, at 8:57 AM, Johannes W. Dietrich wrote: At 13:50 Uhr +1300 25.03.2010, Rolf Turner wrote: No, I am obviously not claiming that at all. You are just being silly/deliberately obtuse. This comment denotes your personal position and responsibility, not that of all list

Re: [R-SIG-Mac] shell.exe() equivalent?

2010-03-24 Thread Rolf Turner
system(paste(source,filename)) (That's the ***right*** --- i.e. Unix --- way of doing things.) cheers, Rolf Turner Kasper On Wed, Mar 24, 2010 at 7:37 PM, Gi-Mick Wu mick...@mail.mcgill.ca wrote: Greetings R Mac users, I switched from windows to mac relatively

Re: [R-SIG-Mac] shell.exe() equivalent?

2010-03-24 Thread Rolf Turner
On 25/03/2010, at 1:48 PM, Kasper Daniel Hansen wrote: On Wed, Mar 24, 2010 at 8:35 PM, Rolf Turner r.tur...@auckland.ac.nz wrote: Note that Mac OSX is really Unix (with an annoying point-and-click veneer pasted on top of it) so you don't need to mess around with this ``open'' nonsense

Re: [R-SIG-Mac] Building from source problems.

2009-11-01 Thread Rolf Turner
On 30/10/2009, at 10:25 AM, Simon Urbanek wrote: snip But back to your problem -- in order to support the optimizations (- mtune=core2) you want to switch to gcc-4.2 -- you can do that by typing sudo gcc_select 4.2 in a Terminal window. When I do that I get: The following

Re: [R-SIG-Mac] Building from source problems.

2009-11-01 Thread Rolf Turner
On 2/11/2009, at 9:48 AM, Steve Lianoglou wrote: Hi, On Sun, Nov 1, 2009 at 2:46 PM, Rolf Turner r.tur...@auckland.ac.nz wrote: Checking on what I've got (following your instructions) I found that I have version 2.5 of Xcode. That appears to be the latest version

Re: [R-SIG-Mac] Building from source problems.

2009-11-01 Thread Rolf Turner
On 2/11/2009, at 11:26 AM, Steve Lianoglou wrote: snip In the mean time, do you mind if we take one or two stabs in the dark? By all means! Go for it! So, if I'm not mistaken, it seems your only problem now is compiling a package from source, and you're getting some

Re: [R-SIG-Mac] Building from source problems.

2009-10-29 Thread Rolf Turner
On 30/10/2009, at 3:51 AM, Simon Urbanek wrote: Rolf, you could save yourself a lot of trouble if you just looked at CRAN -- you'd notice that I have actually released an official 2.10.0 binary just for you ;). Well thank you! Too kind! :-) I think I'm OK for the time

Re: [R-SIG-Mac] Can't get help.start() to work.

2009-10-29 Thread Rolf Turner
On 30/10/2009, at 11:45 AM, Simon Urbanek wrote: snip As far as I can tell, the only customization that I've done is to use ~/Rlib as my ``local'' personal library of packages. I.e. I have the lines .libPaths(/Users/rturner/Rlib)

[R-SIG-Mac] Building from source problems.

2009-10-28 Thread Rolf Turner
``core2'' mean? Sheesh! :-) Thanks for any enlightenment. cheers, Rolf Turner ## Attention:\ This e-mail message is privileged and confid...{{dropped:9

Re: [R-SIG-Mac] Can't get help.start() to work.

2009-10-28 Thread Rolf Turner
On 29/10/2009, at 2:39 PM, Duncan Murdoch wrote: On 28/10/2009 9:04 PM, Rolf Turner wrote: Under my newly installed version of R, 2.10.0, help.start() refuses to perform. When I issue the command I get a ``Host is unreachable'' message from the browser (which is Firefox, version 3.5.3). I

Re: [R-SIG-Mac] Can't get help.start() to work.

2009-10-28 Thread Rolf Turner
On 29/10/2009, at 4:59 PM, Duncan Murdoch wrote: (After a long gripe from me.) You get what you pay for. Well, I ***used*** to get infinitely more than I paid for, and I had kind of gotten used to this. It's irritating when something that was working

Re: [R-SIG-Mac] Can't get help.start() to work --- update.

2009-10-28 Thread Rolf Turner
, Rolf Turner ## Attention:\ This e-mail message is privileged and confid...{{dropped:9}} ___ R-SIG-Mac mailing list R-SIG-Mac@stat.math.ethz.ch https://stat.ethz.ch/mailman/listinfo/r

[R-SIG-Mac] Problem upgrading to R version 2.10.0.

2009-10-27 Thread Rolf Turner
? cheers, Rolf Turner ## Attention:\ This e-mail message is privileged and confid...{{dropped:9}} ___ R-SIG-Mac mailing list R-SIG-Mac@stat.math.ethz.ch https://stat.ethz.ch

Re: [R-SIG-Mac] Problem upgrading to R version 2.10.0.

2009-10-27 Thread Rolf Turner
of a 32-bit version? I would have thought that this would be the default. cheers, Rolf Turner ## Attention:\ This e-mail message is privileged and confid...{{dropped:9

Re: [R-SIG-Mac] Problem upgrading to R version 2.10.0.

2009-10-27 Thread Rolf Turner
. of using Linux. Psigh!) cheers, Rolf Turner ## Attention:\ This e-mail message is privileged and confid...{{dropped:9}} ___ R-SIG-Mac mailing list R-SIG-Mac

Re: [R-SIG-Mac] Reminder: Please test the 2.9.0 beta/rc binaries!

2009-04-10 Thread Rolf Turner
/Library/Frameworks/Python.framework/Versions/2.3/lib/ python2.3/pkgutil.pyo So pkgutil is a python script. I don't know what to *do* with that information, but! Hoping that this may be a *little* help to you. cheers, Rolf Turner

Re: [R-SIG-Mac] Case distinction on a Mac.

2009-02-20 Thread Rolf Turner
-insensitivity. It seems a really dumb design choice on the part of Apple, but. They have a perfectly good Unix system underlying their shaganappi GUI structure, but they let it get mucked up by this case- insensitivity shambles. cheers, Rolf Turner

Re: [R-SIG-Mac] Case distinction on a Mac.

2009-02-20 Thread Rolf Turner
Thanks for a very clear and enlightening discussion of the issue. cheers, Rolf Turner On 21/02/2009, at 11:10 AM, Simon Urbanek wrote: On Feb 20, 2009, at 15:20 , Rolf Turner wrote: On 20/02/2009, at 1:29 PM, Timothy Bates wrote: Dear Rolf, By default, the file

Re: [R-SIG-Mac] Case distinction on a Mac.

2009-02-19 Thread Rolf Turner
On 20/02/2009, at 1:28 PM, Steve Revilak wrote: From: Rolf Turner r.tur...@auckland.ac.nz Date: Fri, 20 Feb 2009 12:47:46 +1300 Subject: [R-SIG-Mac] Case distinction on a Mac. I have noticed that OS X sometimes fails to make a case distinction in the names of files. E.g. if I have a file

Re: [R-SIG-Mac] Case distinction on a Mac.

2009-02-19 Thread Rolf Turner
. I guess I'll just have to lump it. cheers, Rolf Turner Kasper On Feb 19, 2009, at 16:52 , Rolf Turner wrote: On 20/02/2009, at 1:28 PM, Steve Revilak wrote: From: Rolf Turner r.tur...@auckland.ac.nz Date: Fri, 20 Feb 2009 12:47:46 +1300 Subject: [R

Re: [R-SIG-Mac] Case distinction on a Mac.

2009-02-19 Thread Rolf Turner
On 20/02/2009, at 2:51 PM, David Winsemius wrote: Rolf; I think you should check whether reformatting is really necessary. My understanding is that Disk Utility will allow repartitioning and one can choose a disk format at the time that a new partition is created. Not clear to me what

Re: [R-SIG-Mac] Case distinction on a Mac.

2009-02-19 Thread Rolf Turner
and e.g. documenting 'R CMD install' and 'R CMD CHECK' .I had assumed these were Windows users, but I now realise that there may be Mac users who habitually ignore case. On Fri, 20 Feb 2009, Rolf Turner wrote: On 20/02/2009, at 2:51 PM, David Winsemius wrote: Rolf; I think you should check

[R-SIG-Mac] Can't load MASS when using Mac GUI.

2009-02-17 Thread Rolf Turner
base other attached packages: [1] misc_0.0-11fortunes_1.3-5 MASS_7.2-44 Thanks for any insights. cheers, Rolf Turner ## Attention:\ This e-mail message is privileged and confid...{{dropped:9

Re: [R-SIG-Mac] [R] Rd2dvi problem.

2008-11-10 Thread Rolf Turner
On 10/11/2008, at 7:54 PM, Prof Brian Ripley wrote: R_LATEXCMD is defined in R_HOME/etc/Renviron (sourced by R CMD), and conditionally re-defined in Rd2dvi. On a sub-architecture build such as the CRAN MacOS distribution that will be R_HOME/etc/arch/Renviron, and on that distribution it is

Re: [R-SIG-Mac] [R] Rd2dvi problem.

2008-11-10 Thread Rolf Turner
On 11/11/2008, at 9:48 AM, Prof Brian Ripley wrote: On Tue, 11 Nov 2008, Rolf Turner wrote: On 10/11/2008, at 7:54 PM, Prof Brian Ripley wrote: R_LATEXCMD is defined in R_HOME/etc/Renviron (sourced by R CMD), and conditionally re-defined in Rd2dvi. On a sub-architecture build

[R-SIG-Mac] Flushing the buffer?

2007-06-26 Thread Rolf Turner
into the console. Any ideas? Thanks. cheers, Rolf Turner ## Attention:\ This e-mail message is privileged and confidenti...{{dropped