Re: [R-SIG-Mac] Is R more heavy on memory or processor?

2009-03-26 Thread Prof Brian Ripley
On Tue, 24 Mar 2009, Simon Urbanek wrote: On Mar 24, 2009, at 14:55 , Booman, M wrote: Dear all, I am going to purchase a Power Mac (a new one, with Nehalem processor) for my R-based microarray analyses. I use mainly Bioconductor packages, and a typical dataset would consist of 50

[R-SIG-Mac] Is R more heavy on memory or processor?

2009-03-24 Thread Booman, M
Dear all, I am going to purchase a Power Mac (a new one, with Nehalem processor) for my R-based microarray analyses. I use mainly Bioconductor packages, and a typical dataset would consist of 50 microarrays with 40,000 datapoints each. To make the right choice of processor and memory, I have

Re: [R-SIG-Mac] Is R more heavy on memory or processor?

2009-03-24 Thread Dan Putler
Hi Marije, Personally, I would be more concerned with memory than processor. Running out of memory can be an unpleasant surprise. Base R uses a single core, but Simon Urbanek's multicore package (the most recent version of which, 0.1-3, is dated today) does allow you to use multiple cores at

Re: [R-SIG-Mac] Is R more heavy on memory or processor?

2009-03-24 Thread Steven McKinney
- From: r-sig-mac-boun...@stat.math.ethz.ch on behalf of Dan Putler Sent: Tue 3/24/2009 12:08 PM To: Booman, M Cc: R-SIG-Mac Subject: Re: [R-SIG-Mac] Is R more heavy on memory or processor? Hi Marije, Personally, I would be more concerned with memory than processor. Running out of memory can

Re: [R-SIG-Mac] Is R more heavy on memory or processor?

2009-03-24 Thread Simon Urbanek
On Mar 24, 2009, at 14:55 , Booman, M wrote: Dear all, I am going to purchase a Power Mac (a new one, with Nehalem processor) for my R-based microarray analyses. I use mainly Bioconductor packages, and a typical dataset would consist of 50 microarrays with 40,000 datapoints each. To

Re: [R-SIG-Mac] Is R more heavy on memory or processor?

2009-03-24 Thread Booman, M
memory as I can afford right now and expand later. Cheers, Marije Van: Simon Urbanek [mailto:simon.urba...@r-project.org] Verzonden: di 24-3-2009 21:01 Aan: Booman, M CC: R-SIG-Mac Onderwerp: Re: [R-SIG-Mac] Is R more heavy on memory or processor? On Mar 24