[R-sig-phylo] Network from gene trees

2014-11-03 Thread Vojtěch Zeisek
Hello, let's say I have many gene trees (all have same labels) in one multiPhylo object. The trees are not fully congruent. One of the reasons can be hybridizations among taxa. I wonder if I can make from those trees a network looking, for example, like those from SplitsTree. I looked at

Re: [R-sig-phylo] Network from gene trees

2014-11-03 Thread Klaus Schliep
Hello Vojt�ch, have you looked into consensusNet in phangorn? Regards, Klaus Am 03.11.2014 03:10 schrieb Vojt�ch Zeisek vo...@trapa.cz: Hello, let's say I have many gene trees (all have same labels) in one multiPhylo object. The trees are not fully congruent. One of the reasons can be

Re: [R-sig-phylo] Network from gene trees

2014-11-03 Thread Vojtěch Zeisek
Hello, thank You, I overlooked that function. Yes, that is what I'm looking for. Sincerely, Vojtěch Dne Po 3. listopadu 2014 10:23:32 jste napsal(a): Hello Vojtěch, have you looked into consensusNet in phangorn? Regards, Klaus Am 03.11.2014 03:10 schrieb Vojtěch Zeisek vo...@trapa.cz: