Rich FitzJohn has programmed something of what Will suggested in
diversitree: look at details in ?make.musse.multitrait. I'm not sure if
there was ever a paper published on this. We do a similar thing to Will's
idea in http://rspb.royalsocietypublishing.org/content/283/1830/20152304
(with the
Hello,
Personally, I would advise you not to use a tree, for your 2 traits times 2
(+/-) makes 4 combinations, meaning a tree that is dichotomic cannot reveal
anything! Can you quantify your "diversification" without "rate"? How do you
obtain your "diversification rates"? If it is something
I'm not sure of any particular methods that do this, but one preliminary
approach that you could try is combining the two traits into a single trait
(00, 01, 10, and 11) which you could then analyze with any of the standard
methods. You could then look for whether any of the states have higher or
