Re: [Rcpp-devel] Maximum Columns in Rcpp DataFrame (revisited)

2014-07-08 Thread Steffen Neumann
aderInfo2).eval() ; Yours, Steffen On Di, 2014-07-08 at 11:17 -0500, Dirk Eddelbuettel wrote: > On 8 July 2014 at 17:51, Steffen Neumann wrote: > | Hi, > | > | I (think I) need to create a DataFrame with more than 20 entries, > | because I want another slot in this file: > | htt

[Rcpp-devel] Maximum Columns in Rcpp DataFrame (revisited)

2014-07-08 Thread Steffen Neumann
#include that ? I need to fake a directory structure so that picks up my version of #include ? 4) Is that future proof ?! Thanks in advance, Yours, Steffen -- IPB HalleAG Massenspektrometrie & Bioinformatik Dr. Steffen Neumann http://www.I

[Rcpp-devel] no matching function for call in mzR on Mac after Rcpp 0.11.0 update

2014-02-07 Thread Steffen Neumann
cy = Rcpp::PreserveStorage] /Library/Frameworks/R.framework/Versions/3.1/Resources/library/Rcpp/include/Rcpp/Reference.h:34: note: Rcpp::Reference_Impl::Reference_Impl(const Rcpp::Reference_Impl&) [with StoragePolicy = Rcpp::PreserveStorage] -- IPB Halle

Re: [Rcpp-devel] Undefined Reference to typeinfo for Rcpp::RObject for Rdisop on Mac after Rcpp/RcppClassic update

2014-02-07 Thread Steffen Neumann
c needs a version bump? It was last updated 1/26, before > the Rcpp update. >From my understanding, yes. Yours, Steffen -- IPB HalleAG Massenspektrometrie & Bioinformatik Dr. Steffen Neumann http://www.IPB-Halle.DE Weinberg 3 http://msbi.bi

Re: [Rcpp-devel] Undefined Reference to typeinfo for Rcpp::RObject for Rdisop on Mac after Rcpp/RcppClassic update

2014-02-06 Thread Steffen Neumann
ere is more about the build environment on > | http://bioconductor.org/checkResults/2.14/bioc-LATEST/petty-NodeInfo.html Did that help ? Otherwise we need input from Dan or Kevin. Yours, Steffen -- IPB HalleAG Massenspektrometrie & Bioinformatik Dr. Steffen Neu

[Rcpp-devel] Undefined Reference to typeinfo for Rcpp::RObject for Rdisop on Mac after Rcpp/RcppClassic update

2014-02-06 Thread Steffen Neumann
led echo __ZTIN4Rcpp7RObjectE | c++filt -s auto -t -_ typeinfo for Rcpp::RObject -- IPB HalleAG Massenspektrometrie & Bioinformatik Dr. Steffen Neumann http://www.IPB-Halle.DE Weinberg 3 http://msbi.bic-gh.de 06120 Halle

Re: [Rcpp-devel] Rcpp and required steps before next release

2014-01-28 Thread Steffen Neumann
see > > https://github.com/kevinushey/RcppBiocChecks > > One package needs one of our fixed packages, another fails with an include > issue similar to the one reported above -- and the rest passes. > > > Summary > === > > We consider Rcpp r

Re: [Rcpp-devel] Rcpp and required steps before next release

2014-01-28 Thread Steffen Neumann
need to cleanup the Makevars ? Do I need a versioned Depends: for RcppClassic now ? Yours, Steffen -- IPB HalleAG Massenspektrometrie & Bioinformatik Dr. Steffen Neumann http://www.IPB-Halle.DE Weinberg 3 http://msbi.bic-gh.de 06120 Halle

Re: [Rcpp-devel] [Bioc-devel] mzR 1.4.0 crashes R at loading

2012-11-22 Thread Steffen Neumann
s and frustrated end-users ? Yours, Steffen -- IPB HalleAG Massenspektrometrie & Bioinformatik Dr. Steffen Neumann http://www.IPB-Halle.DE Weinberg 3 http://msbi.bic-gh.de 06120 Halle Tel. +49 (0) 345 5582 - 1470

Re: [Rcpp-devel] [Bioc-devel] mzR 1.4.0 crashes R at loading

2012-11-22 Thread Steffen Neumann
es utils datasets methods base > > > > other attached packages: > > [1] mzR_1.4.0 Rcpp_0.9.15 > > > > loaded via a namespace (and not attached): > > [1] Biobase_2.18.0 BiocGenerics_0.4.0 codetools_0.2-8 > > > > __________

[Rcpp-devel] Rprintf equivalent for std::cout ?

2012-11-11 Thread Steffen Neumann
C preprocessor handle the replacement, i.e. something like c++ -Dstd::cout=Rcpp::rout ? [1] http://bioconductor.org/checkResults/2.12/bioc-LATEST/mzR/lamb2-checksrc.html -- IPB Halle AG Massenspektrometrie & Bioinformatik Dr. Steffen Neumann http://www.IPB

[Rcpp-devel] Student project: Rcpp wrapper for proteowizard Mass Spectrometry C++ library

2012-11-08 Thread Steffen Neumann
pand this coverage to provide a more complete binding of the C++ library http://sf.net/projects/proteowizard/ I hope this doesn't count as too much noise on the list. Yours, Steffen -- IPB HalleAG Massenspektrometrie & Bioinformatik Dr. Steffen Neumann http

Re: [Rcpp-devel] Warning: Class "C++Object" is defin ed (with package slot ‘Rcpp’) but n o metadata object fo und

2012-07-30 Thread Steffen Neumann
| [1] ISA2R_1.0.7Biobase_2.17.6 BiocGenerics_0.3.0 > | | > | | loaded via a namespace (and not attached): > | | [1] Rcpp_0.9.13 codetools_0.2-8 mzR_1.3.8 tools_2.15.1 > | | xcms_1.33.13 > | | > | | ----------

Re: [Rcpp-devel] DataFrame::create() in endless loop

2012-02-28 Thread Steffen Neumann
003335.html > and subsequent messages. > > > > Hope this helps. > > > > Cheers, > > > > Slava Mazur > > > > > ___ > Rcpp-devel mailing list > Rcpp-devel@lists.r-forge.r-project.org > https://lists.r-forge.

[Rcpp-devel] DataFrame::create() in endless loop

2012-02-28 Thread Steffen Neumann
076e81c4d in __libc_start_main (main=, argc=, ubp_av=, init=, fini=, rtld_fini=, stack_end=0x7fffe468) at libc-start.c:226 #64 0x00400819 in _start () -- IPB Halle AG Massenspektrometrie & Bioinformatik Dr. Steffen Neumann http:/

[Rcpp-devel] Reading-list when creating a mapping for a semi-complex C++ library

2011-07-23 Thread Steffen Neumann
(in terms of architecture) to what I want, so I can go and read their code for inspiration ? Yours, Steffen -- IPB Halle AG Massenspektrometrie & Bioinformatik Dr. Steffen Neumann http://www.IPB-Halle.DE Weinberg 3 http://msbi.bic-gh.de

Re: [Rcpp-devel] Using Rcpp on mingw 4.5.2

2011-01-08 Thread Steffen Neumann
IPB Halle AG Massenspektrometrie & Bioinformatik Dr. Steffen Neumann http://www.IPB-Halle.DE Weinberg 3 http://msbi.bic-gh.de 06120 Halle Tel. +49 (0) 345 5582 - 1470 +49 (0) 345 5582 - 0 sn

[Rcpp-devel] Using Rcpp on mingw 4.5.2

2011-01-07 Thread Steffen Neumann
::SugarMath_1::VEC_TYPE = int] C:/Users/sneumann/Documents/R/win-library/2.13/Rcpp/include/Rcpp/sugar/block/SugarMath.h:33:4: note: Rcpp::sugar::SugarMath_1, double (*)(double)>::SugarMath_1(const Rcpp::sugar::SugarMath_1, double (*)(double)>&) C:/Users/sneumann/Documents/R/win