Hi Greg,
Thank you for the link!
It seems that Huw pasted in the same piece of code as the one you provided.
I managed to fix the issue using the above function.
Would it be worthwhile to add it into the Cookbook, if it's a reocurring
problem for some? I personally never would've thought to
Hi Adam,
By default the RDKit picks the locations to do wedging. There's no built-in
function to reapply the wedging from an input mol file (we probably should
add this), but you can find a good one here, as part of the ChEMBL
structure pipeline:
Hello Everyone,
I'm having some trouble trying to depict molecules the exact same way as
the input mol block (V2000) was drawn. My main problem is that I've drawn
in a wedge bond between atoms 1 and 7 (the right hand side of the
cyclopropyl ring), and RDKit depicts the molecule with a wedge bond
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