Re: [Rdkit-discuss] Is that possible to get features/descriptors for single atoms in a molecule

2018-11-04 Thread Guillaume GODIN
Conformer is related to 3D conformer of the molecule (not atoms but one of the possible conformer of the 3D representatives if there is more than one) De : Cao Xuan Date : dimanche, 4 novembre 2018 à 07:15 À : "rdkit-discuss@lists.sourceforge.net" Objet : [Rdkit-discuss] Is that possible to

Re: [Rdkit-discuss] Is that possible to get features/descriptors for single atoms in a molecule

2018-11-04 Thread Guillaume GODIN
Dear Cao Xuan, You need to have a 3D molecule for RDF computation + RDF by definition is not local but global to a molecule. BR, Guillaume De : Cao Xuan Date : dimanche, 4 novembre 2018 à 07:15 À : "rdkit-discuss@lists.sourceforge.net" Objet : [Rdkit-discuss] Is that possible to get

[Rdkit-discuss] Is that possible to get features/descriptors for single atoms in a molecule

2018-11-04 Thread Cao Xuan
Hi, I am just wondering does rdkit support the functionality of get descriptors value for single atoms of a molecules. For example, in cdk, they have following function: // mol is molecule object; atoms.get(i) returns a single atoms // descriptor.calculate will calculate the descriptor