Re: [Rdkit-discuss] Trouble install 2012_03_1's PgSQL cartridge in Postgres 9.1.

2012-04-26 Thread Jan Holst Jensen
On 2012-04-26 05:32, Greg Landrum wrote: I continue to be unable to reproduce these problems. Running on a 64bit Ubuntu 11.10 VM I installed the following packages using apt-get: sudo apt-get install postgresql sudo apt-get install postgresql-contrib postgresql-server-dev-all I build

Re: [Rdkit-discuss] Trouble install 2012_03_1's PgSQL cartridge in Postgres 9.1.

2012-04-26 Thread Gianluca Sforna
On Thu, Apr 26, 2012 at 8:26 AM, Jan Holst Jensen j...@biochemfusion.com wrote: jhje@ubuntu-lynet-test:~/RDKit_2012_03_1/Code/PgSQL/rdkit$ After having installed the cartridge as the postgres user with psql /opt/postgres/9.0/share/postgresql/contrib/rdkit.sql: I am not able to dig details

Re: [Rdkit-discuss] Trouble install 2012_03_1's PgSQL cartridge in Postgres 9.1.

2012-04-26 Thread Jan Holst Jensen
On 2012-04-26 08:37, Gianluca Sforna wrote: On Thu, Apr 26, 2012 at 8:26 AM, Jan Holst Jensenj...@biochemfusion.com wrote: jhje@ubuntu-lynet-test:~/RDKit_2012_03_1/Code/PgSQL/rdkit$ After having installed the cartridge as the postgres user with psql

Re: [Rdkit-discuss] Trouble install 2012_03_1's PgSQL cartridge in Postgres 9.1.

2012-04-25 Thread Jan Holst Jensen
Dear Greg, The same thing happens when I try to enable the 'rdkit' extension directly. postgres@linux-dev-x86 ~ $ psql psql (9.1.3) Type help for help. postgres=# create extension rdkit; FATAL: failed to initialize rdkit.tanimoto_threshold to 0.5 FATAL: failed to

Re: [Rdkit-discuss] Trouble install 2012_03_1's PgSQL cartridge in Postgres 9.1. [Follow-up - testing on Ubuntu 10.04]

2012-04-25 Thread Jan Holst Jensen
Meanwhile, I got RDKit_2012_03_1 running fine in Postgres 9.0.4 (the OpenSCG version) on an Ubuntu 10.04 build server. I will try to install Postgres 9.1 on that server and see if the error can be reproduced with that setup. Dear Greg, I have now installed Postgres 9.1 on the mentioned

Re: [Rdkit-discuss] Trouble install 2012_03_1's PgSQL cartridge in Postgres 9.1.

2012-04-25 Thread Greg Landrum
I continue to be unable to reproduce these problems. Running on a 64bit Ubuntu 11.10 VM I installed the following packages using apt-get: sudo apt-get install postgresql sudo apt-get install postgresql-contrib postgresql-server-dev-all I build the cartridge:

[Rdkit-discuss] Trouble install 2012_03_1's PgSQL cartridge in Postgres 9.1.

2012-04-24 Thread Jan Holst Jensen
Hi, I am having problems install the Postgres cartridge in Postgres 9.1 on Linux Mint 12 (which is based on Ubuntu 11.10). RDKit 2012_03_1 builds without any issues and all tests pass. The PgSQL cartridge builds fine too, and installs fine as seen below. jhje@linux-dev-x86

Re: [Rdkit-discuss] Trouble install 2012_03_1's PgSQL cartridge in Postgres 9.1.

2012-04-24 Thread Greg Landrum
Dear Jan, On Tue, Apr 24, 2012 at 6:55 PM, Jan Holst Jensen j...@biochemfusion.com wrote: Hi, I am having problems install the Postgres cartridge in Postgres 9.1 on Linux Mint 12 (which is based on Ubuntu 11.10). RDKit 2012_03_1 builds without any issues and all tests pass. good so far.