Re: [Rdkit-discuss] Postgres query performance

2017-12-08 Thread Rajarshi Guha
Thanks Riccardo. While I can see Rdkit 2017.09.2.0 is available on conda ( https://anaconda.org/search?q=rdkit), rdkit-postgres seems to be stuck at 2016.03.4 Can I update the rdkit installation and use it to update the Postgres extension? Or must I wait for a rdkit-postgres conda with the right

Re: [Rdkit-discuss] Postgres query performance

2017-12-08 Thread Greg Landrum
At some point, in the not too distant future (I hope), there will be an updated version of the cartridge. On Fri, Dec 8, 2017 at 3:55 PM, Rajarshi Guha wrote: > Thanks Riccardo. > > While I can see Rdkit 2017.09.2.0 is available on conda ( > https://anaconda.org/search?q=rdkit), rdkit-postgres s

Re: [Rdkit-discuss] Postgres query performance

2017-12-08 Thread Rajarshi Guha
Thanks Greg. Right now I have rdkit 2017.09.2.0 py27h080088d_1rdkit rdkit-postgresql 2016.03.3py27_1rdkit But when I try to install the extension I get an error chembl23=# create extension if not exists rdkit; ERROR: could not load li

Re: [Rdkit-discuss] Cartridge upgrades

2017-12-08 Thread Tim Dudgeon
Thanks Greg. I hit some strange problems with similarity search not working after an upgrade (SSS seemed OK). I never really got to the bottom of this as I managed to solve it by deleting the RDKit artifacts from the database and dropping and reinstalling the cartridge and after that all works