Hi all,
I just recently received my allocation on the University of Boulder's
Research Computing cluster, with the supercomputer JANUS:
https://www.rc.colorado.edu/
And so I logged in and compiled sage from source on one of the JANUS
compile nodes (6.1.1, downloaded yesterday).
I ran make on
http://pixel.katestange.net/
Hi all,
I just recently received my allocation on the University of Boulder's
Research Computing cluster, with the supercomputer JANUS:
https://www.rc.colorado.edu/
And so I logged in and compiled sage from source on one of the JANUS
compile nodes (6.1.1,
someone can suggest something?
Kate
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), then when
I run 'make check I get
sage -t devel/sage-main/sage/graphs/graph_generators.py
[138.8 s]
Q1. Since 138.8 180, why was the original TIMEOUT not sufficient?
Q2. Should I be worried that I had to raise TIMEOUT to 240?
Kate
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To post
: 144.7 seconds
real2m24.827s
user1m38.499s
sys 0m2.192s
[EMAIL PROTECTED] sage-2.10.1-ia64-Linux]$
On Feb 5, 4:23 pm, William Stein [EMAIL PROTECTED] wrote:
On Feb 5, 2008 1:18 PM, Kate [EMAIL PROTECTED] wrote:
When I build sage-2.10.1 (using gcc-4.2.2) on my itanium-Linux
Is there a good reason why the file 'sage-2.9.1.txt'
is at the top-level of sage-2.10?
Kate
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)]
**
1 items had failures:
1 of 109 in __main__.example_58
***Test Failed*** 1 failures.
For whitespace errors, see the file .doctest_polynomial_element.pyx
[6.6 s]
exit code: 256
--
Kate
Michael,
This fixes the issue. Thanks!
Kate
On Jan 16, 11:22 am, mabshoff [EMAIL PROTECTED]
dortmund.de wrote:
On Jan 16, 5:08 pm, Kate [EMAIL PROTECTED] wrote:
Michael,
Hi Kate,
The patch for #1790 is ok, but after applying the patch for #1791
I now get
I see that I missed one
Michael,
sage-2.10.alpha3 fails one test (polynomial_element.pyx) on
both
x86-Linux (pentium4-fc6)
x86_64-Linux (Opteron-fc6)
Both were built using gcc-4.2.2
Details follow.
Kate
**
x86-Linux
**
sage -t devel/sage-main/sage/rings/polynomial/
polynomial_element.pyx
_fmpz_poly_mul_karatsuba_trunc_left()... ok
Testing _fmpz_poly_mul_KS()... GNU MP: Cannot reallocate memory
(old_size=8 new_size=4294959128)
./spkg-check: line 51: 11240 Aborted (core dumped) ./
fmpz_poly-test
Kate
On Jan 7, 9:30 pm, mabshoff [EMAIL PROTECTED]
dortmund.de wrote:
Hello
resolved. I meant
to ask for confirmation, but I got side tracked over the last couple
days :(
Yes, you may close it. flint built ... just did not pass its tests.
Kate
On Jan 9, 11:23 am, mabshoff [EMAIL PROTECTED]
dortmund.de wrote:
On Jan 9, 5:15 pm, Kate [EMAIL PROTECTED] wrote
people - it worried me! - perhaps
these
files can be 'touched' and the package rebuilt?
Kate
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Michael,
I have tried
http://sage.math.washington.edu/home/mabshoff/libfplll-2.1-20071024.p0.spkg
and can report that it builds on my x86_64-Linux box. The build is
now
stuck at the cvxopt-0.8.2.p4 spot (same error) that I reported for
x86-Linux and ia64-Linux.
Kate
On Nov 7, 6:16 pm
to more accurately reflect what you
want.
Kate
On Nov 7, 2:08 pm, William Stein [EMAIL PROTECTED] wrote:
This should really be sent to sage-devel, so I'm forwarding it there.
-- Forwarded message --
From: William Stein [EMAIL PROTECTED]
Date: Nov 7, 2007 11:07 AM
Subject: Re
:
Traceback (most recent call last):
File /home/kate/sage/sage-2.8.12-ia64-Linux/local/lib/python2.5/
doctest.py, line 1212, in __run
compileflags, 1) in test.globs
File doctest __main__.example_0[0], line 1, in module
from cvxopt.base import *###line 4:
: from
Bill,
On my ia64-Linux machine,
I get the following error with the -funroll-loops option. I am
using gcc-4.2.1. If I take out that option, things compile fine.
make[2]: Entering directory `/home/kate/sage/sage-2.8.5-ia64-Linux/
spkg/build/flint-0.2.p2/src'
gcc -std=c99 -I/usr/include -I/home
FYI - the following have recently
been released:
gmp-4.2.2
mpfr-2.3.0
ecm-6.1.3
Kate
--
Kate Minola
University of Maryland, College Park
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that is faster at linear algebra.
To get SAGE to build using ATLAS, must ATLAS be installed
in a standard place? If so, what is that place? And what version
of ATLAS are you using?
--
Kate Minola
University of Maryland, College Park
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To post
) if built with gcc-4.1.2.
--
Kate Minola
University of Maryland, College Park
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Michael,
Which thread?
Kate
On Jun 4, 2:04 pm, Michel [EMAIL PROTECTED] wrote:
William already posted a patch to this in another thread!
On Jun 4, 7:39 pm, Nick Alexander [EMAIL PROTECTED] wrote:
PS. Strictly speaking one should use os.path.separator instead of
/ :-)
Perhaps
on demand. So for
example, on one network I see
/u/kate
whereas the absolute path is
/automount/u/kate
By the way, the word automount could be anything and is
under system administrator control. So strip_automount_prefix()
just removes this prefix that os.path.abspath() shows.
Nick Alexander
Michel,
BTW
My name is Michel and not Michael!
Sincere apologies!
Kate
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-DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1
-DHAVE_DLFCN_H=1 -DSTDC_HEADERS=1 -DHAVE_LINBOX_SOLUTIONS_MINPOLY_H=1
-DHAVE_BLAS=1 -I. -I.
-I/home/kate/sage/sage-2.5.3-x86_64-Linux-pompey/local/include
-fPIC -I/home/kate/sage/sage-2.5.3-x86_64-Linux-pompey/local/include
-L/home/kate/sage/sage-2.5.3
information.
import sys
sys.platform
'linux2'
Kate
On May 10, 5:56 pm, Yi Qiang [EMAIL PROTECTED] wrote:
Hi Kate,
Can you please report what sys.platform says on an ia64 machine?
On May 10, 2007, at 1:24 PM, Kate Minola wrote:
William,
I was able to successfully build sage-2.5
Yi,
I applied the patch you supplied, but sadly I still get the
same errors.
Kate
On May 11, 11:54 am, Yi Qiang [EMAIL PROTECTED] wrote:
Hi Kate,
Can you try applying the follow patch and see if the tests pass now?
You do not need to run make test all over again, the dsage unit tests
can
#include linbox/solutions/det.h
then the build continues successfully.
I do not understand why these missing header files
do not cause a problem under FC6.
--
Kate Minola
University of Maryland, College Park
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): File
/home/kate/sage/sage-2.5-ia64-Linux/local/lib/python2.5/site-packages/sage/dsage/twisted/pb.py,
line 420, in requestAvatar
avatar.attached(avatar, mind) File
/home/kate/sage/sage-2.5-ia64-Linux/local/lib/python2.5/site-packages/sage/dsage/twisted/pb.py,
line 264, in attached
build_image(ext_modules, packages, NUMERIX)
File /home/kate/sage/sage-2.5.rc2-x86-Linux/spkg/build/
matplotlib-0.90.0.p1/setupext.py, line 752, in build_image
add_agg_flags(module)
File /home/kate/sage/sage-2.5.rc2-x86-Linux/spkg/build/
matplotlib-0.90.0.p1/setupext.py, line 162
*** *** Error: TIMED OUT! *** ***
devel/sage-main/sage/schemes/elliptic_curves/ell_generic.py
First error message is:
File ell_generic.py, line 220:
sage: eqn = symbolic_expression(E); eqn
Exception raised:
Traceback (most recent call last):
File /home/kate/sage/sage-2.5.alpha3
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