Re: [Scikit-learn-general] image analysis

2014-07-29 Thread Nicolas
Hi Raphael I would have a look at this talk (Scipy 2014): https://www.youtube.com/watch?v=MxK7Fe4xfXM&list=PLYx7XA2nY5GfuhCvStxgbynFNrxr3VFog&index=111 as they have developed library to identify / track particles in images and series of images cheers Nico On 30 July 2014 09:50, Raphael Okoye

Re: [Scikit-learn-general] image analysis

2014-07-29 Thread Raphael Okoye
hi Ronnie, Thanks for the response. I want to extract the blobs/crystals from the background. I want to be able to accurately account for all the blobs in each image. As an aside question, please do you know if my existing python version will still work if I install Anaconda python on it? Regard

Re: [Scikit-learn-general] image analysis

2014-07-29 Thread Ronnie Ghose
... hasn't been in the last few days afaik Raphael. And looking at the LAB channel alone without any changes *will* segment a few of those in the 3rd image, also what features do you need exactly? On Tue, Jul 29, 2014 at 4:16 PM, Raphael Okoye wrote: > hi Andy, > > Thanks a lot. I have tr

Re: [Scikit-learn-general] image analysis

2014-07-29 Thread Raphael Okoye
hi Andy, Thanks a lot. I have tried on my own but not with scikimage. I used cell profiler http://www.cellprofiler.org/... I tried using scikit-image but it's not working properly because not all it's libararies are working in the version of python I'm using. I was advised to install Anaconda a

Re: [Scikit-learn-general] image analysis

2014-07-29 Thread Andy
Hi Raphael. This list is about the scikit-learn machine learning package, not image analysis. You might want to talk to the scikit-image list. However, just asking for help for a general task without connecting it to the package or having tried anything yourself is not likely to get a great an

[Scikit-learn-general] image analysis

2014-07-29 Thread Raphael Okoye
hi all, I want to analyze these images. See links below. The background and the crystals have the same color thus, making it difficult to segment. And since the background and crystals have the same color, it is difficult to simply subtract the background. Please, I need ideas on how to proceed w