Re: [spctools-discuss] Help in geneting Sequest and X!Tandem parameter files

2020-04-13 Thread Jimmy Eng
SEQUEST can run within the TPP (at least that was the case in the early 2000s) but it is not provided with the TPP. In the old days, you would acquire it as part of Thermo's BioWorks package ($10K+ price for that software suite). I wouldn't be surprised if new/current versions of this software

Re: [spctools-discuss] Help in geneting Sequest and X!Tandem parameter files

2020-04-13 Thread Javan Okendo
Jimmy, I thought I can run it within TPP? I can see it is listed as one of the sequence search engines within the TPP. I have not contacted the Thermo guys yet. On Mon, Apr 13, 2020 at 9:43 PM Jimmy Eng wrote: > Javan, > > Note that SEQUEST is a commercial product distributed by Thermo and

Re: [spctools-discuss] Help in geneting Sequest and X!Tandem parameter files

2020-04-13 Thread Jimmy Eng
Javan, Note that SEQUEST is a commercial product distributed by Thermo and does not come with the TPP. I'm not even sure if current versions of SEQUEST through Thermo are compatible with the TPP pipeline. Have you acquired SEQUEST from Thermo? On Mon, Apr 13, 2020 at 10:16 AM JAVAN OKENDO

[spctools-discuss] Help in geneting Sequest and X!Tandem parameter files

2020-04-13 Thread JAVAN OKENDO
Dear all, It is my first time to run the SEQUEST and I am wodering how to generate this on TPP? Can someone share a sample parameter file? -- You received this message because you are subscribed to the Google Groups "spctools-discuss" group. To unsubscribe from this group and stop receiving