[spctools-discuss] Re: Question about Apache

2009-09-21 Thread Brian Pratt
You only need Apache if you want to use the web-based nice user interface to help you find your way around the TPP tool set. If you want to just run from the command line then it's not required. On Sun, Sep 20, 2009 at 9:59 PM, sunsun szy3...@gmail.com wrote: HI, Can anybody here explain why

[spctools-discuss] Re: Question about Apache

2009-09-21 Thread Natalie Tasman
In other words, you can access the TPP's web interface through your usual web browser (like firefox, IE, chrome, safari, etc), but instead of going to a website out on the internet, you're going to a website that's running locally on your computer, through the installed Apache webserver on your

[spctools-discuss] one question about ProtXML format

2009-09-21 Thread NIKI
hi, i need to extract some information from my protXML files, but there are some fields whose meaning is not clear to me. peptide peptide_sequence=IITHPNFNGNTLDNDIMLIK charge=3 initial_probability=0.9990 nsp_adjusted_probability=0.9992 peptide_group_designator=b weight=1.00