Hi,
Ok. I will send to you both. Also, I hope you got my other answer where I
told you that the trypsin was the problem... do not know why...
El lunes, 19 de junio de 2017, 11:20:48 (UTC-7), David Shteynberg escribió:
>
> Hi Carolina,
>
> It appears the file you've sent me does contain mixture
Hello David,
I would like you to check the results if you have time. I thought it was
weird because I have two other replicates and they are fine with high res,
it is QE data, but again, you might be right and this sample is having some
issue with high res. They are DDA data with three
Hello,
I was trying to run peptide analysis with PeptideProphet but it keeps
showig me error...
I was using dimethyl labeling technique and peptides were identified using
Mascot. I exported all data from Mascot, uploaded here and it fails to do
anything. I was wondering whether anyone could
Hi Carolina,
It appears the file you've sent me does contain mixture models, so I am
really not sure why you are seeing this message at all. If you can send
the input file for both one that shows the warning and one that doesn't I
might be able to figure it out.
Cheers,
David
On Mon, Jun 19,
Hi Davi,
I found my problem with that sample, finally it was a problem with the type
of enzyme, in high resolution the type of enzyme was 2, and in low res it
was 1. When I changed that for 1 in high resolution the probabilities were
fine again. So something with that option was messing my
