Re: AW: AW: Lucas

ies the version difference. Thus I use it with newer Solr/ES versions without problems so far. I will be on vacations for two weeks, after that I'd be available for contributions. Best, Erik On 22 Aug 2014, at 15:36, Jörn Kottmann wrote: It would probably nice to migrate those to the

Re: AW: Lucas

It would probably nice to migrate those to the current versions of Lucene/Solr. Jörn On 08/13/2014 08:44 AM, armin.weg...@bka.bund.de wrote: Hi Renauld, that's nice, thank you. Are you using Lucene 4.x or an older version? It's a while ago, that I've asked that question and I didn't get much

Re: UIMA CAS Editor question

On 07/10/2014 12:35 PM, Markus K. wrote: Hi, Lately i encountered a problem including the CAS-Editor. Its more a development question, ill go more into detail: I wrote a view which is able to display some Annotations of the same Type. Its intention is to apply a given action to those Annotation

Re: XMI/annotation viewer for browser

On 12/03/2013 12:28 PM, Roberto Franchini wrote: On Tue, Dec 3, 2013 at 11:54 AM, Jörn Kottmann wrote: >On 12/03/2013 11:23 AM, Seid Muhie wrote: >> >>And also WebAnno<https://code.google.com/p/webanno/>, which uses the brat >>visualization but the server side is UI

Re: XMI/annotation viewer for browser

On 12/03/2013 11:23 AM, Seid Muhie wrote: And also WebAnno, which uses the brat visualization but the server side is UIMA annotation (currntly for POS, Named Entity, Coreference, Lemma and Dependency Parsing) Well, they are just using the Brat JS component an

Re: XMI/annotation viewer for browser

Have a look at the brat project, they provide a JS library which can display annotations in a browser. http://brat.nlplab.org/ HTH, Jörn On 12/03/2013 10:44 AM, Roberto Franchini wrote: Hi to all, I'm looking for an "annotation viewer" for the web. We have a REST api that wraps ours nlp pipel

Re: Building on Mac; simple NER example?

On 10/23/2013 01:02 AM, Paul J. Lucas wrote: Assuming I can get past this, my primary goal is to use UIMA to perform NER, i.e., give it some text and get people & places back. I couldn't find any examples of this. Can this be done using UIMA? Example C++ code? Thanks. You could try Apache

Re: Best approach for analyzing a set of documents

On 10/03/2013 03:57 PM, Marshall Schor wrote: Later, it became clear that the Collection Reader and Cas Consumer were just parameterizations of normal Analysis Engines, so they were replaced by those. The older classes still work, though. We should deprecate them and communicate this better to

Re: DocumentAnalyzer: Straight access to the Analysis Engine descriptors available in the classpath

On 08/01/2013 03:10 PM, Nicolas Hernandez wrote: I often use the DocumentAnalyzer present in the uima-tools. But its interface is not so user-friendly, I spend too much times to browse the file system to find the desired Analysis Engine descriptors. Assuming that the code of the Analysis Engine

Re: Camel configuration in UIMA-AS

On 07/29/2013 05:54 PM, Jaroslaw Cwiklik wrote: UIMA-AS and Camel integration is described in Chapter 6 Uima Async Scaleut document: http://uima.apache.org/d/uima-as-2.4.0/uima_async_scaleout.html#ugr.async.camel.driver Its essentially a thin camel wrapper around UIMA-AS client. Its quite dated

Re: Ruta - MARKFAST

On 05/23/2013 01:19 PM, Peter Klügl wrote: That is the official documentation. An up-to-date version that describes the new features since 2.0.0 can be found in the trunk. I know that there are many passages and section that need to be added or improved, but it is hard to find enough time for it

Re: [VOTE] New name for UIMA TextMarker

+1 for UIMA-RUCOTALA +0 for UIMA-TRL, UIMA-RUCOLA Jörn On 04/18/2013 12:10 PM, Peter Klügl wrote: Hi, we are currently looking for a new name for the Apache UIMA TextMarker system (language and workbench) and invite the UIMA comunity to vote for a name. This is not a formal vote. The vote sh

Re: Multi-view CAS and sofa-unaware AE

On 04/03/2013 05:10 PM, Peter Klügl wrote: Yes, but imagine you have a CAS with 10 views and you want to apply a primitive sofa-unaware AE on each view. The easiest solution I found was to write a template AAE descriptor, replaced the AE descriptor and sofa name (and mapping), instantiate the AA

Re: Multi-view CAS and sofa-unaware AE

Yes, you can use the sofa mapping, to map some view to the _InitialView. Have a look here: http://uima.apache.org/d/uimaj-2.4.0/tutorials_and_users_guides.html#ugr.tug.mvs.sofa_name_mapping Jörn On 04/03/2013 02:19 PM, Peter Klügl wrote: Hi, sorry for this beginner question: It there a short

Re: Apache UIMA is on Ohloh

The Apache UIMA page is here: http://www.ohloh.net/p/7917 If anybody of the dev team is interested to join the project just ask on ohloh to be added as a manager. Jörn On 02/06/2013 07:44 PM, Marshall Schor wrote: There's a website, https://www.ohloh.net, that tracks various things about open

Re: Using JCasGen outside eclipse

On 10/13/2012 01:33 AM, Steven Bethard wrote: Yep, I'm happy to donate the code. It was all written by me, and I've already signed an Apache CLA, so I assume it would be pretty easy. Great, that makes it easy. +1 from me to include the code. It should probably go into the next release of uimaj

Re: Eclipse Cas Editor

An easy way of using JCas inside eclipse is to use the eclipse buddy policy to enable the UIMA Runtime Plugin to load the classes from your plugin. Thanks to Peter to pointing that out to me. Jörn On 09/22/2012 11:51 PM, Jörn Kottmann wrote: Hello, using JCas doesn't work here becaus

Re: Eclipse Cas Editor

Hello, using JCas doesn't work here because the UIMA Runtime doesn't import your JCas class. To get things working you can do two things: - Do not use JCas, you can do all operations with the CAS API - Fix the imports in the UIMA Runtime OSGI Manifest and only use the modified bundle HTH, Jör

Re: Problems instantitating an Annotator

On 08/22/2012 08:47 AM, Andreas Niekler wrote: there is an aggregate annotator within the Descriptors named OpenNlpTextAnalyzer.xml. Within there under Resources the Model files for the openNLP Tools are set. In the Chunker xml there is just an information that this Resource needs to be defined

Re: CAS Editor Plugin

Hello, not sure what you are doing. My best guess is that you use the eclipse launch support. If thats the case you probably miss the uimaj-runtime dependency. Try to compile everything with maven first, refresh all eclipse projects and start it again. The maven build generates the MANIFEST.M

Re: Sofa mapping for a CM

? Any comments on proposed fix? Eddie On Wed, Jul 4, 2012 at 6:53 AM, Jörn Kottmann wrote: Hi all, are sofa mappings for CMs are supposed to work? Jörn

Sofa mapping for a CM

Hi all, are sofa mappings for CMs are supposed to work? Jörn

Re: CAS Editor: link feature structure with other FSes

Hello, any suggestions how linking FSes together can be improved in the Cas Editor? You always need to find the FSes or annotations first to link them and that always requires a few clicks. It is easy to make this much faster if there is dedicated view support for a specific labeling task. Jörn

Re: Exception thrown during CAS serialization for Remote UIMA-AS Service

You write a string to the CAS which contains a non-xml character. This character cannot be serialized into XMI, and thats what this exception is about. Have a look at our documentation explaining the issue: http://uima.apache.org/d/uimaj-2.4.0/tutorials_and_users_guides.html#ugr.tug.xmi_emf.xml

Re: How to deploy a UIMA-AS Serivce with a Cas Multiplier?

I am running the 2.3.1 release version on my cluster. Jörn On 06/13/2012 01:02 PM, Jörn Kottmann wrote: The error was linked to my delegate imports in the AAE, one delegate was imported twice. It first worked, and when I tried to scale it i got the error message in dd2spring. After removing

Re: How to deploy a UIMA-AS Serivce with a Cas Multiplier?

The error was linked to my delegate imports in the AAE, one delegate was imported twice. It first worked, and when I tried to scale it i got the error message in dd2spring. After removing the duplicate import it worked. The Reader is an AE which creates a new view, so its not a CR. Did you fix a

Re: How to deploy a UIMA-AS Serivce with a Cas Multiplier?

: XPTY0004: A sequence of more than one item is not allowed as the first argument of string() (@key, @key) After fixing it my delegates can be scaled as needed. Jörn On 06/11/2012 04:06 PM, Jörn Kottmann wrote: Hello all, I have an AAE which uses a Cas Multiplier to segment an input CAS into a

How to deploy a UIMA-AS Serivce with a Cas Multiplier?

Hello all, I have an AAE which uses a Cas Multiplier to segment an input CAS into a couple of CASes. My pipeline is constructed like this: ReaderAE SegmentDetectionAE (just outputs segment annotations) SegmentationCM (cuts based on the previously detected annotations) WriterAE (should write ever

How to load XMI CAS from a DB inside a Reader AE?

Hi all, I have a database which contains XMIs and would like to process these with UIMA-AS. My pipeline looks like this: Database Reader AE Result Writer AE I made an AAE composed out of the two AEs, the first gets a CAS with an ID encoded into its sofa. It then fetches the XMI from the DB, and

Re: CAS Editor instructions

On 04/24/2012 01:25 AM, Nicolas Hernandez wrote: I do not have tested type system inclusion with the CAS editor. TypeSystem imports should work in 2.4.0. Lots of problems where fixed for this version. Jörn

Re: CAS Editor instructions

Looks like you are using an old version. The 2.4.0 version works better. I suggest that you try that one instead. In this version it asks you to point it to a type system if none for the XMI file can be found in the configured location (default is TypeSystem.xml in the root of the project). Hope

Re: UIMA Annotator Library

Yes, you can use Apache OpenNLP. Its a very well written library for standard NLP tasks. See here: opennlp.apache.org Hope this helps, Jörn On 04/14/2012 10:34 AM, Jeremy Villalobos wrote: Hello: I have studied the User's Guide on creating Annotators, testing them and deploying them with a CP

Re: How do I assign more heap memory to CAS Editor Analysis Engine when running Training?

On 04/12/2012 11:32 AM, Peter Thygesen wrote: Strange. Still problems. I reduced the corpus files to 10 files. running with RunAE still doesn't produce any events, but when I run it with UIMA Analysis Engine configuration it works. That sounds strange, because it should not make a difference at

Re: How do I assign more heap memory to CAS Editor Analysis Engine when running Training?

On 03/29/2012 11:22 AM, Peter Thygesen wrote: Using RunAE; Must be doing something wrong. No model is created and I dont see any scores being generated... main class: org.apache.uima.examples.RunAE arguments: -s2 descriptors/TokenizerTrainer.xml corpus VM args: -Xmx1000m CONSOLE OUTPUT: ---

Re: How do I assign more heap memory to CAS Editor Analysis Engine when running Training?

On 03/29/2012 10:22 AM, Peter Thygesen wrote: Hi Jörn, Sorry for the late reply. Caught a cold and had to spend some days home :(. Couldn't we log it as a feature request in your Jira? +1, please open a jira issue. Jörn

Re: How do I assign more heap memory to CAS Editor Analysis Engine when running Training?

On 03/23/2012 12:34 AM, Peter Thygesen wrote: Trying to build a token model with UIMA CAS editor. But I get out of memory exception. The run configuration is a UIMA Analysis Engine configuration and does not have a arguments tab (like plain java apps) where I can set the command line arguments fo

Re: How do I assign more heap memory to CAS Editor Analysis Engine when running Training?

No, we added an eclipse launcher to start AEs, so that you do not have to use some kind of script. Jörn On 03/23/2012 02:06 AM, Fitch, Britt wrote: I assume you are running one of the scripts in the bin directory, if so, you can add the java -Xmx param to where it gets called. If you look in

Re: CAS Editor setup

Hello, have a look at the 2.4.0 documentation. Cas Editor project support was removed for this version. You are running 2.4.1-SNAPSHOT. Now you can right-click any project and set the type system location to your type system. It defaults to /ProjectName/TypeSystem.xml Hope this helps, Jörn On

Re: AW: Tool for viewing views other than _InitialView

On 12/29/11 12:55 PM, armin.weg...@bka.bund.de wrote: Hi Peter, there is no such option in the context menu and I can't find it in the documentation of version 2.3.1. Did I miss something? We added this feature in 2.4.0. I strongly suggest to update to this version since there a couple of b

Re: Merging CASes

At OpenNLP we take the gold data, extract the text, run it through a one of our components and compute the scores on the fly. In your case I would do it similar. I would take the XMI files generated from the gold standard corpus, copy the text and other input data from the initial view to a secon

UIMA AS client and unkown exception classes

Hi all, I have a pretty generic UIMA AS client I reuse for various analysis pipelines. The client gets its input from an ActiveMQ queue and then sends it on to my UIMA AS services via the UIMA AS Client API. The loop which is sending requests to the UIMA AS service is using the sendCAS method.

Re: How to create an annotator that should reload its resources at runtime (without restarting the pipeline)?

On 11/18/11 3:17 PM, Spico Florin wrote: I'm using UIMA ConceptMapper Annotator. Due to the fact that its dictionary can be changed outside the UIMA pipeline(we have this scenario), I would like to reload the content of used dictionary without restarting the whole pipeline. The pipeline is deploy

Re: Eclipse Cas Editor Unsaved Quick Annotations

Hello, thanks for reporting the issue. It only happens when you are using a Cas Editor Project. I suggest that you don't use it anymore. Support for Cas Editor Projects is also removed in the 2.4.0 version which will be released soon. Just create a new eclipse project and move your files over th

Re: jcas, annotation, address, and id

On 10/11/11 10:33 PM, Coarr, Matt wrote: First, is the getAddress() method on Annotation (derived from FeatureStructureImpl according to the javadocs) the same value as the "id" value in the xmi serialization? As far as I know the ids are re-mapped at least when the CAS is created from an xmi

Re: Scaling using Hadoop

On 10/6/11 7:43 AM, Thilo Götz wrote: We use hadoop with UIMA. Here's the "fit", in one case: > > 1) UIMA runs as the map step; we put the uima pipeline into the mapper. Hadoop > has a configure (?) method where you can stick the creation and set up of the > uima pipeline, similar to UIMA

Re: UIMA as a web-service annotation tool

On 10/5/11 1:53 PM, Georg Fette wrote: I would like to do manual annotations on CASs with a fixed type system. At the moment I use for this purpose the TextMarker tool, which supports manual annotation on CASs. The use of a software which has to be installed scare some people in my project off, s

Re: UIMA- Support for HTML, PDF, Doc files

Hello, UIMA itself is just a framework to build analysis pipelines. To analyze HTML, PDF or Word documents you need a component which can extract the text from these formats. You can use Apache Tika together with our Tika integration in the addons project to extract text from various data fo

Re: merging CAS objects

On 9/16/11 12:12 PM, Alexander Klenner wrote: Hi Jörn, we are using a combination of UNICORE and UIMA, I think it'd take too long to explain the complete architecture but in a nutshell: unicore does all the workflow stuff (passing XCAS obejcts to next job and so on) and all our unicore "grid

Re: merging CAS objects

Hello, depending on your application it might be just as fast if you just have one CAS and then put it through your three analysis pipelines, one after another. When you do it this way your throughput can be just as high, only the latency goes up. When you have multiple machines or a cluster

Re: Iterate over annotations with multiple types

Isn't this slow? Because it then needs to iterate over every single AnnotationFS inside my CAS. Jörn On 9/7/11 3:06 PM, Richard Eckart de Castilho wrote: Hi Jörn, what is the best way to iterate over annotations which have different types? you can use a filtered iterator - more or less like

Iterate over annotations with multiple types

Hello all, what is the best way to iterate over annotations which have different types? I have documents which usually have to following structure: One Headline Annotation A couple of Sentence Annotations A Sub-Headline Annotation A couple of Sentence Annotations ... Now I would like to iterat

Re: MalformedObjectNameException deploying multiple services

On 8/25/11 12:46 AM, william.co...@gmail.com wrote: Hi, I am doing some experiments with UIMA AS. I create two deployment descriptors that work fine alone, but if I try to launch both with the command deployAsyncService.sh Deploy01.xml Deploy02.xml it fails. I get the following exception: Caus

Re: Using JMX console with EC2

On 8/24/11 8:38 PM, Richard Eckart de Castilho wrote: I recently had trouble connecting to a JMX server running on Linux (not EC2 though). It worked after I specified a "java.rmi.server.hostname" The parameters I used on the server side in the end were: -Djava.rmi.server.hostname=192.168.0.25

Re: Using JMX console with EC2

On 8/23/11 10:48 PM, william.co...@gmail.com wrote: Yes, I followed that instructions, but it didn't work. I tried searching about this issue and looks like it is related to the second port you mentioned and firewall. ActiveMQ has a configuration where one can set this second port, but couldn't f

Re: Using JMX console with EC2

On 8/23/11 10:00 PM, william.co...@gmail.com wrote: I am having an issue that maybe is out of topic, sorry. I launched a EC2 free tier and managed to setup UIMA As there. Now I am trying to monitor it remotely using JMX and a JConsole, but I am failing to connect. I configured the security group

Re: UIMA-AS Deployment Descriptor Editor installation fails

On 8/9/11 3:07 PM, Richard Eckart de Castilho wrote: That's true for users. It would still be nice for the developer "one-time-setup" to mention that this bundle needs to be installed. Because when I run e.g. the CAS Editor module as an Eclipse application, Eclipse does not try to download mis

Re: How to deploy multiple UIMA-AS Services?

On 7/29/11 3:00 PM, Eddie Epstein wrote: Hi Jörn, Starting multiple services in the same folder should be fine. I do that all the time, and get uima.log, uima.log.1, uima.log.2, etc. My launches are usually separated by several seconds. Thanks, that is also how it works on my server. When I

Re: How to deploy multiple UIMA-AS Services?

I am just looking for a best practice or some advice how this is usually done. Jörn On 7/29/11 2:05 PM, Jörn Kottmann wrote: Hi all, I changed my UIMA-AS Services a bit, and have now one analysis pipeline per language. Up to now I only had one pipeline and deployed it with the provided

How to deploy multiple UIMA-AS Services?

Hi all, I changed my UIMA-AS Services a bit, and have now one analysis pipeline per language. Up to now I only had one pipeline and deployed it with the provided deploy script. Is it safe to use this script to run more than one UIMA-AS Service concurrently? For example: - Set UIMA_HOME variabl

Re: Cas Editor

Hi, did it works now for you? The wizard was changed to not depend anymore on the Cas Editor project stuff, I will have a look and eventually open a bug report if the issue still exists. Jörn On 5/20/11 11:57 AM, Guillaume Vauvert wrote: Hello Richard, Thank you very much, I hope that thi

Re: Cas Editor: group annotation types by namespace?

On 5/9/11 1:29 PM, Jens Grivolla wrote: Hi, I was wondering if it wouldn't be more useful to group annotation types in the "mode" and similar menus by namespace rather than inheritance. I don't think most users care much about supertypes, and mostly don't know about them, whereas the namesp

Re: Cas Editor: selecting annotation type

On 5/5/11 6:09 PM, Jens Grivolla wrote: On 05/05/2011 03:04 PM, Jörn Kottmann wrote: On 5/5/11 2:41 PM, Jens Grivolla wrote: On 05/05/2011 01:55 PM, Jörn Kottmann wrote: On 5/5/11 1:44 PM, Jörn Kottmann wrote: That sounds like one more good reason to do that. Another one I thought of is that

Re: Cas Editor: selecting annotation type

On 5/5/11 2:41 PM, Jens Grivolla wrote: On 05/05/2011 01:55 PM, Jörn Kottmann wrote: On 5/5/11 1:44 PM, Jörn Kottmann wrote: That sounds like one more good reason to do that. Another one I thought of is that it is confusing when you add an annotation which you cannot see afterward. So lets

Re: Cas Editor: selecting annotation type

On 5/5/11 1:44 PM, Jörn Kottmann wrote: That sounds like one more good reason to do that. Another one I thought of is that it is confusing when you add an annotation which you cannot see afterward. So lets open a jira and do this enhancement. Here is the jira: https://issues.apache.org/jira

Re: Cas Editor: selecting annotation type

On 5/5/11 1:33 PM, Jens Grivolla wrote: On 05/04/2011 11:21 AM, Jörn Kottmann wrote: On 5/4/11 11:10 AM, Jens Grivolla wrote: I have recently started using the Annotation Editor (as installed in Eclipse from http://www.apache.org/dist/uima/eclipse-update-site/, i.e. the official 2.3.1 version

Re: Cas Editor: selecting annotation type

On 5/5/11 12:55 PM, Jens Grivolla wrote: On 05/05/2011 12:37 PM, Jens Grivolla wrote: I'm getting errors when opening an XMI with the Annotation editor: Caused by: org.eclipse.core.internal.resources.ResourceException: Resource '/OneOfMyClosedProjects' is not open. at org.eclipse.core.internal.

Re: Cas Editor: selecting annotation type

On 5/5/11 12:53 PM, Jörn Kottmann wrote: On 5/5/11 12:37 PM, Jens Grivolla wrote: It seems to have picked it up ok, but I'm getting errors when opening an XMI with the Annotation editor: Caused by: org.eclipse.core.internal.resources.ResourceException: Resource '/OneOfMyClosedPr

Re: Cas Editor: selecting annotation type

On 5/5/11 12:37 PM, Jens Grivolla wrote: It seems to have picked it up ok, but I'm getting errors when opening an XMI with the Annotation editor: Caused by: org.eclipse.core.internal.resources.ResourceException: Resource '/OneOfMyClosedProjects' is not open. at org.eclipse.core.internal.r

Re: Cas Editor: selecting annotation type

On 5/4/11 2:33 PM, Jens Grivolla wrote: Unfortunately this consistently freezes Eclipse every time I have tried it, so I haven't even been able to see what it is supposed to do. The keyboard shortcuts might help, if it worked. We've tried it on several versions of Eclipse (all on Linux), and

Re: Cas Editor: selecting annotation type

On 5/4/11 11:10 AM, Jens Grivolla wrote: Hi, I have recently started using the Annotation Editor (as installed in Eclipse from http://www.apache.org/dist/uima/eclipse-update-site/, i.e. the official 2.3.1 version). In order to add annotations it seems that you need to select the annotation

Re: CR+LF = 1 character?

On 4/20/11 10:58 AM, Jens Grivolla wrote: Hi, while working on the integration between UIMA and a different text annotation system we ran into problems with differing offsets between the two systems. As it turns out, the other system considers CR+LF (Windows style line endings) to be two ch

Re: Sandbox: LuCas Lucene update

On 4/13/11 2:44 PM, Erik Fäßler wrote: Hello Tommaso, thanks a lot for your reply :) I will follow the steps you gave me as soon as there is a little time for this. Also thanks for the SolrCas hint. I think we already talked about this. As far as I understood, Solrcas as well as the Solr-UI

Re: CAS Editor questions

On 4/13/11 2:31 PM, Peter Klügl wrote: Hi, hmm, I don't know. I only use key bindings with commands. Something like: Nice, I guess I should also do it like this. Thanks, Jörn

Re: CAS Editor questions

On 1/25/11 2:45 PM, Peter Klügl wrote: Thank you for your answers. I'll follow your instructions and get back to you, if there are problems. About the key bindungs: I propose "," and "." in combination with CTRL and ALT I created a jira issue for this change: https://issues.apache.org/jira/

Re: Solr now supports UIMA

On 4/4/11 6:23 PM, Tommaso Teofili wrote: The current implementation runs UIMA pipelines with the simplest way an external app could do [1] but it'd be good to provide support to add support for CPEs and UIMA-AS, so anyone interested in helping with that is welcome. If the analysis pipeline sho

Re: How to detect text sofa?

On 4/4/11 8:43 PM, Eddie Epstein wrote: On Mon, Apr 4, 2011 at 6:52 AM, Jörn Kottmann wrote: Hi all, what is the suggested way to detect a text sofa? As far as I know the suggested way of doing it is via the mime type, right? Which options remain when the mime type is not set? Is

Solr now supports UIMA

Hi all, some might already know it, the new Solr 3.1 has now support for UIMA: http://wiki.apache.org/solr/SolrUIMA Jörn

Re: How to detect text sofa?

On 4/4/11 2:17 PM, Richard Eckart de Castilho wrote: Hi Jörn, what is the suggested way to detect a text sofa? As far as I know the suggested way of doing it is via the mime type, right? Which options remain when the mime type is not set? Is CAS.getDocumentText != null appropriate ? in my o

How to detect text sofa?

Hi all, what is the suggested way to detect a text sofa? As far as I know the suggested way of doing it is via the mime type, right? Which options remain when the mime type is not set? Is CAS.getDocumentText != null appropriate ? I need this for the CAS view support inside the Cas Editor, the i

Re: Referring to file resources

On 3/2/11 11:36 PM, Marshall Schor wrote: On 3/2/2011 10:05 AM, Jörn Kottmann wrote: On 3/2/11 3:25 PM, Adam Lally wrote: file:com/apache.d.txt is a relative path; relative paths for resources are resolved using the classpath and/or the datapath. For the file protocol, URLs starting with

Re: How to process structured input with UIMA?

On 3/2/11 3:25 PM, Andreas Kahl wrote: Anuj and Jan, Thank you very much for your tips. I think, I will try the annotation-way: Use an CollectionProcessingEngine to iterate all the Docs in my input-XML. Instatiate a CAS with the input-XML as text. Then run an Annotator converting all XML-Tags in

Re: Referring to file resources

On 3/2/11 3:25 PM, Adam Lally wrote: file:com/apache.d.txt is a relative path; relative paths for resources are resolved using the classpath and/or the datapath. For the file protocol, URLs starting with file:/ orfile:/// are absolute. What is the default data path directory when deploying a

Re: How to process structured input with UIMA?

On 3/2/11 11:14 AM, Andreas Kahl wrote: Mainly I am concerned with the latter: Those metadata-records would come in as XML with dozens of fields containing relatively short texts (most less than 255chars). We need to perform NLP (tokenization, stemming ...) and some simpler manipulations like r

Re: Referring to file resources

On 3/2/11 10:29 AM, Greg Holmberg wrote: I've tried a lot of values for X, trying to get it to point to the conf dir. For example,file:///../conf andfile:///$main_root/conf Nothing works except a full, absolute path:file:/C:/Users/Greg/workspace/MyAnnotator/conf But I don't want to hard-

Re: UIMA-AS Service gets killed when idle

On 3/1/11 3:25 PM, Jaroslaw Cwiklik wrote: Hmm, strange. Perhaps putting the process in a background would help like so: nohup bin/deployAsyncService.sh& Should be easy to test. Start the process and exit the shell. See what happens. Anything in the log or console indicating OOM or some other pro

Re: UIMA-AS Service gets killed when idle

On 3/1/11 9:56 AM, Jörn Kottmann wrote: Hi all, I noticed that my UIMA-AS Service gets killed when it is not processing anything for some time. The following exception is written to the log/console: 2/28/11 8:49:16 PM - 22: org.apache.uima.adapter.jms.activemq.JmsOutputChannel

UIMA-AS Service gets killed when idle

Hi all, I noticed that my UIMA-AS Service gets killed when it is not processing anything for some time. The following exception is written to the log/console: 2/28/11 8:49:16 PM - 22: org.apache.uima.adapter.jms.activemq.JmsOutputChannel$ConnectionTimer.startTimer: INFO: Inactivity Timer Expir

Re: Analysis Engines for mbox like data

On 2/14/11 4:49 AM, Radhouane Aniba wrote: Hello everyone, Quite unusual request to this list, I am wondering if there is any analysis engine that allow to mine MBOX like formats such as the famous mailman mailing list archives in a way that it allow to structure these kind of data into messages

Re: CAS Editor questions

On 1/25/11 1:26 PM, Peter Klügl wrote: Sorry, some additional questions: Can I somehow automatically activate the annotation mode of several types? We want to annotate more than 12 different types and it takes some time for each documents to select these types. Yes that should just work. Th

Re: CAS Editor questions

On 1/25/11 1:15 PM, Peter Klügl wrote: Hello, how can I open a xmiCAS that's not in a corpus folder? I'm using the version of the current update site. Is this functionality aldready included there or not until the next release. Yes that should be possible. Just double click the xmi file a

Re: CAS Editor type system questions

On 1/20/11 2:00 PM, Peter Klügl wrote: Hello Jörn, Am 20.01.2011 13:49, schrieb Jörn Kottmann: On 1/20/11 1:40 PM, Peter Klügl wrote: Hello, when using the CAS Editor I have two problems and I want to ask if I'm doing something wrong: I can't open a xmi if it contains anno

Re: CAS Editor type system questions

On 1/20/11 1:40 PM, Peter Klügl wrote: Hello, when using the CAS Editor I have two problems and I want to ask if I'm doing something wrong: I can't open a xmi if it contains annotations of types that are not defined in the specified type system. Yes, that is a limitation which is there. M

Re: CAS Editor as a stand-alone application?

On 12/2/10 5:05 PM, Philip Ogren wrote: I am wondering if it is possible to run the CAS Editor as a stand-alone application or if it is only available as a plugin within Eclipse. It could be a part of a RCP application. There might be still a few minor issues which must be solved, but I am ha

Re: Serialize only one view of a CAS

t;CAS projections". A brief description is in https://cwiki.apache.org/UIMA/reducing-overhead-for-remote-service-calls.html Eddie On Wed, Oct 20, 2010 at 6:35 AM, Jörn Kottmann wrote: Hi everyone, is it possible to only serialize one view of a CAS ? In my case the "_InitialVi

Re: Serialize only one view of a CAS

support "CAS projections". A brief description is in https://cwiki.apache.org/UIMA/reducing-overhead-for-remote-service-calls.html Eddie On Wed, Oct 20, 2010 at 6:35 AM, Jörn Kottmann wrote: Hi everyone, is it possible to only serialize one view of a CAS ? In my case the &qu

Serialize only one view of a CAS

Hi everyone, is it possible to only serialize one view of a CAS ? In my case the "_InitialView" contains an xml document, which is transformed by an AE into a plain text representation, and placed in a view called "Article". The serialization code now should only write the "Article" view into t

Re: Embedding UIMA Annotator into GATE

Hi Natalia, most of the developers here do not have much experience with GATE. Depending on what you want to accomplish we might be able to help you to do it entirely with the UIMA framework and the available Analysis Engines. Jörn On 9/14/10 6:13 PM, Natalia Diaz Rodriguez wrote: Hello, I

Re: Also the performance of UIMA AS

Hello, you can use a profiler to measure where the CPU time is spent. Jörn feixiang wrote: Hello, I am very interested in testting the performance of UIMA AS architecture.For exemple, I want to find the AE which is the bottleneck of the system. Fortunately, UIMA provides us some tools e

Re: the performance of UIMA AS

LinTong wrote: Hallo everybody Now I am investigating UIMA AS. I'm very confused by the poor performance of UIMA-AS. I run the example AS descriptor MeetingDetectorTAE. No matter Deploy_MeetingDetectorTAE_3MeetingAnnotators.xml or Deploy_MeetingDetectorTAE_Sync_3Instances.xml, there is no speedu

Re: Memory leak in UIMA-AS ?

look. Jörn Jörn Kottmann wrote: Maybe there is one more memory leak. In the memory dump are 2M instances of ConcurrentHashMap.HashEntry objects. The HashEntry objects have a String key and a Long value. Here is a sample: Key: 4d8fb444:128083b6841:-48ddinQ_HBaseWriter_1.3 Value

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