Re: [Users] Issue with npernode value in MPI

2024-05-10 Thread Shamim Haque 1910511
Hello Steve, My Runscript is now working fine after removing -npernode. Thanks for the help. Regards Shamim Haque Senior Research Fellow (SRF) Department of Physics IISER Bhopal ᐧ On Thu, May 2, 2024 at 1:05 AM Shamim Haque 1910511 wrote: > Hello Steve, > > Thanks for pointing this

Re: [Users] Issue with npernode value in MPI

2024-05-01 Thread Shamim Haque 1910511
lling MPI with the wrong parameters, > specificall -npernode. Since you're using slurm, MPI should be smart enough > that you don't need to pass -n, -npernode, How did you get a Runscript and > Submitscript for this machine. Did you create yourself? > > --Steve > On 5/1/2024 6:54 AM,

Re: [Users] Issue with npernode value in MPI

2024-05-01 Thread Shamim Haque 1910511
Sorry for the typo in the email: *I tried to run a simulation with procs=640 (nodes 16) procs=160 (nodes 4)* Shamim Haque Senior Research Fellow (SRF) Department of Physics IISER Bhopal ᐧ On Wed, May 1, 2024 at 5:24 PM Shamim Haque 1910511 wrote: > Hi all, > > I am attempting ETK ins

[Users] Issue with npernode value in MPI

2024-05-01 Thread Shamim Haque 1910511
Hi all, I am attempting ETK installation in KALINGA Cluster at NISER, India. This cluster has 40 procs per node and SLURM workload manager. I compiled ETK with gcc-7.5 and openmpi-4.0.5 (attached the machinefile, optionlist, submitscript and runscript). The installation is mostly alright, as I

Re: [Users] Meudon_Mag_NS parfile output

2023-10-16 Thread Shamim Haque 1910511
ing factor. > > -Zach > > * * * > Zachariah Etienne > Assoc. Prof. of Physics, U. of Idaho > Adjunct Assoc. Prof. of Physics & Astronomy, West Virginia U. > https://etienneresearch.com > https://blackholesathome.net > > > On Sat, Oct 14, 2023 a

Re: [Users] Meudon_Mag_NS parfile output

2023-10-14 Thread Shamim Haque 1910511
> Assoc. Prof. of Physics, U. of Idaho > Adjunct Assoc. Prof. of Physics & Astronomy, West Virginia U. > https://etienneresearch.com > https://blackholesathome.net > > > On Thu, Oct 12, 2023 at 6:34 AM Shamim Haque 1910511 > wrote: > >> Hello all, >>

[Users] Meudon_Mag_NS parfile output

2023-10-09 Thread Shamim Haque 1910511
Hello all, I am trying to use the bbig.par parameter file to extract the metric and thermodynamic information for an isolated star ID from Lorene. This parfile is available in Meudon_Mag_NS/par folder. I tried this par file with the given Lorene ID available at Meudon_Mag_NS/data. It is supposed

Re: [Users] Compilation Error in cluster ParamGanga

2023-06-19 Thread Shamim Haque 1910511
> > > > > > > > > > > */home/shamims.iiserb/ET_debug/Cactus/arrangements/Carpet/CarpetMask/src/mask_surface.cc(160): > > > > > error: more than one instance of overloaded function > "CarpetMask::isnan" > > > > matches the ar

Re: [Users] Thorn setup taking too much time in cluster

2023-06-06 Thread Shamim Haque 1910511
> > Regards > > Shamim Haque > > Senior Research Fellow (SRF) > > Department of Physics > > IISER Bhopal > > > > ᐧ > > > > On Tue, May 23, 2023 at 10:08 PM Steven R. Brandt > > wrote: > > > > > Sorry that no one has replie

Re: [Users] Thorn setup taking too much time in cluster

2023-05-23 Thread Shamim Haque 1910511
Department of Physics IISER Bhopal ᐧ On Tue, May 23, 2023 at 10:08 PM Steven R. Brandt wrote: > Sorry that no one has replied to you in a while. Are you still > experiencing this difficulty? > > --Steve > On 4/4/2023 3:08 AM, Shamim Haque 1910511 wrote: > > Dear Steven, &g

Re: [Users] Compilation Error in cluster ParamGanga

2023-05-19 Thread Shamim Haque 1910511
URCE to CPPFLAGS. > > > > > > have you tried adding: > > > > > > CPPFLAGS=-D_XOPEN_SOURCE > > > > > > to your option list file before compiling? > > > > > > Yours, > > > Roland > > > > > > > Thanks Steve. I have

Re: [Users] Compilation Error in cluster ParamGanga

2023-05-11 Thread Shamim Haque 1910511
t; I would talk to the system administrators about that. There is > definitely > > > something wrong with your compiler install if you can't find math.h. > > > > > > --Steve > > > On 5/11/2023 2:02 AM, Shamim Haque 1910511 wrote: > > > > &

Re: [Users] Compilation Error in cluster ParamGanga

2023-05-11 Thread Shamim Haque 1910511
ve > On 5/11/2023 2:02 AM, Shamim Haque 1910511 wrote: > > Dear Steve, > > I just rechecked the cpp program to output M_PI in the computing nodes, > and that is not working right now, which was somehow working fine a few > days ago. I also tried different gcc versions (4.8,

Re: [Users] Compilation Error in cluster ParamGanga

2023-05-03 Thread Shamim Haque 1910511
ims "limits.h" is missing. > Possibly there's something wrong with your icc setup? Maybe you should try > using gcc / gfortran instead. > > --Steve > On 5/3/2023 8:20 AM, Shamim Haque 1910511 wrote: > > Dear Frank, > > I added the alias pattern for th

Re: [Users] Compilation Error in cluster ParamGanga

2023-05-03 Thread Shamim Haque 1910511
chine file and option list are being used during the compilation. Regards Shamim Haque Senior Research Fellow (SRF) Department of Physics IISER Bhopal ᐧ On Wed, May 3, 2023 at 3:49 PM Frank Loeffler wrote: > Hi Shamim > > On Wed, May 03, 2023 at 03:11:49PM +0530, Shamim Haque 1910511 wrot

[Users] Compilation Error in cluster ParamGanga

2023-05-03 Thread Shamim Haque 1910511
Dear all, We are trying to compile ETK on ParamGanga at IIT Roorkee. The compilation stops at a very initial step and gives out the error: *checking whether the Fortran compiler (gfortran ) works... yeschecking whether the Fortran compiler (gfortran ) is a cross-compiler... nochecking

Re: [Users] Thorn setup taking too much time in cluster

2023-04-05 Thread Shamim Haque 1910511
ad to see it ran on your next attempt. Did you do anything > differently? > > --Steve > On 4/4/2023 3:08 AM, Shamim Haque 1910511 wrote: > > Dear Steven, > > I assure you that I submitted the simulation for the first time only. I > used "sim create-submit" to

Re: [Users] Issue with compiling ET on cluster

2022-11-15 Thread Shamim Haque 1910511
Hello Roland, Thanks a lot for the suggestions. I'll try to figure it out. Regards Shamim ᐧ On Tue, Nov 15, 2022 at 11:31 PM Roland Haas wrote: > Hello Shamim, > > > Thanks for pointing out the issue. I'll check with HPC admins to fix the > > Intel-17 or install a better version. Could you

Re: [Users] Issue with compiling ET on cluster

2022-11-15 Thread Shamim Haque 1910511
Hello Roland, Thanks for pointing out the issue. I'll check with HPC admins to fix the Intel-17 or install a better version. Could you please help me with the issue regarding running BNSM on more than 1 node? The issue is explained in my previous email in reply to your suggestions on problems

Re: [Users] Issue with compiling ET on cluster

2022-11-15 Thread Shamim Haque 1910511
. Regards Shamim Haque Senior Research Fellow (SRF) Department of Physics IISER Bhopal ᐧ On Tue, Nov 15, 2022 at 2:30 AM Shamim Haque 1910511 wrote: > Hello Roland, > > Thanks for the comments on the issues. I have attached the config.log file > for Part A, and I'll see what can be done

Re: [Users] Issue with compiling ET on cluster

2022-11-14 Thread Shamim Haque 1910511
Hello Roland, Thanks for the comments on the issues. I have attached the config.log file for Part A, and I'll see what can be done about Part B. For Part C, I found a LAPACK library in our HPC, and the compilation process was completed without that warning. The Helloworld is also executed