Re: [OMPI users] pallas assistance ?

2006-05-24 Thread Paul
It makes no difference on my end. Exact same error. On 5/24/06, Andrew Friedley wrote: Paul wrote: > Somebody call orkin. ;-P > Well I tried running it with things set as noted in the bug report. > However it doesnt change anything on my end. I am willing to do any > verification you guys need

Re: [OMPI users] pallas assistance ?

2006-05-24 Thread Andrew Friedley
Paul wrote: Somebody call orkin. ;-P Well I tried running it with things set as noted in the bug report. However it doesnt change anything on my end. I am willing to do any verification you guys need (time permitting and all). Anything special needed to get mpi_latency to compile ? I can run t

[OMPI users] Wont run with 1.0.2

2006-05-24 Thread Tom Rosmond
After using OPENMPI Ver 1.0.1 for several months without trouble, last week I decided to upgrade to Ver 1.0.2. My primary motivation was curiosity, to see if there was any performance benefit. To my surprise, several of my F90 applications refused to run with the newer version. I also tried V

Re: [OMPI users] pallas assistance ?

2006-05-24 Thread Paul
Somebody call orkin. ;-P Well I tried running it with things set as noted in the bug report. However it doesnt change anything on my end. I am willing to do any verification you guys need (time permitting and all). Anything special needed to get mpi_latency to compile ? I can run that to verify th

Re: [OMPI users] pallas assistance ?

2006-05-24 Thread Jeff Squyres (jsquyres)
There is a known issue with OpenIB on PPC machines at the moment -- see: https://svn.open-mpi.org/trac/ompi/ticket/23 A temporary workaround is to either use the SRQ or disable eager RDMA. See the bug for the details of both of these options.

[OMPI users] pallas assistance ?

2006-05-24 Thread Paul
So I have 64bit ppc versions of openmpi, openib and the pallas files (IMB_MP1 being the important one). ldd checks out okay and shows nothing missing. However when I try to execute the pallas run it dies like so: [root@thing ompi]# /opt/ompi/bin/mpirun -np 2 -machinefile machine.list./IMB-MPI1

Re: [OMPI users] Compile issue on ppc64

2006-05-24 Thread Jeff Squyres (jsquyres)
The SRPM is probably your best bet -- glad you got it working. As for the errors, it's because these are C++ files. You need to also set CXXFLAGS to the flags necessary to compile in 64 bit mode (and F77FLAGS and FCFLAGS for Fortran 77 and 90, if you're building those bindings). Hope that help

Re: [OMPI users] Problems with myirnet support on PPC

2006-05-24 Thread George Bosilca
That's kind of funny ... Look like the PTHREAD_CANCEL was missing from the pthread.h on most of the Linux distributions until the beginning of 2002 (http://sourceware.org/ml/newlib/2002/ msg00538.html). And it look like it is still missing from the MAC OS X 10.3.9 pthread.h (http://lists.app

Re: [OMPI users] Compile issue on ppc64

2006-05-24 Thread Paul
So I got around this problem by building a 64bit version of libsysfs from the src rpm. However now during the "make all install" phase the compilation is dying on a bunch of incompatibilities. As it states those files are 32bit and I need the 64bit ppc version. Not sure why they are being built as

[OMPI users] Problems with myirnet support on PPC

2006-05-24 Thread Brock Palen
Im getting the following error when trying to build OMPI on OSX 10.3.9 with myrinet support, the libs are in /opt/gm/lib Includes: /opt/gm/include Bellow is my configure line and the error: ./configure --prefix=/home/software/openmpi-1.0.2 --with-tm=/home/ software/torque-2.1.0p0 --with-gm=/

Re: [OMPI users] Fortran support not installing

2006-05-24 Thread Terry Reeves
HI, Unfortunately using  lSystemStubs still failed during configure. Output enclosed ompi-output.tar.gz Description: GNU Zip compressed data On 24 May, 2006, at 1:47 PM, users-requ...@open-mpi.org wrote: Message: 1 Date: Wed, 24 May 2006 11:59:52 -0400 From: Michael Kluskens

[OMPI users] Compile issue on ppc64

2006-05-24 Thread Paul
Hello, I have been trying to get openmpi to install (./configure --prefix=/opt/ompi --with-openib=/usr/local/ofed) using various methods on rhel4 u3 ppc64. No matter what method I use when I try to build 64bit (32bit works) it fails while searching for sysfs. I know that redhat only distribut

Re: [OMPI users] spawn failed with errno=-7

2006-05-24 Thread Ralph Castain
Hi Jens What this says is that the system was unable to launch your processes on the specified machines. The usual reason is a lack of ssh authority on the remote machines. You might check the following FAQ to see if it is of help: http://www.open-mpi.org/faq/?category=rsh Let us know if tha

[OMPI users] spawn failed with errno=-7

2006-05-24 Thread Jens Klostermann
I did the following run with openmpi1.0.2: mpirun -np 8 -machinefile ompimachinefile ./hello_world_mpi and got the following errors [stokes:00740] [0,0,0] ORTE_ERROR_LOG: Not implemented in file rmgr_urm.c at line 177 [stokes:00740] [0,0,0] ORTE_ERR

Re: [OMPI users] Fortran support not installing

2006-05-24 Thread Terry Reeves
Here is the out put for both g95 and gfortran  ompi-output.tar.gz Description: GNU Zip compressed data From the output you sent, you ran "./configure FC=g95".  Configure did not find a valid F77 compiler, and therefore skipped both the F77 andF90 bindings.Can you try:    ./configure FC=g95 F77=g9

Re: [OMPI users] .bashrc or .bash_profile

2006-05-24 Thread Jeff Squyres (jsquyres)
Yes, this is a bit confusing. :-( Bash tries to be extra-flexible to allow all different kinds of scenarios. Check out http://www.open-mpi.org/faq/?category=running#adding-ompi-to-path -- we talk about the different shells and what files to edit (most of that information is a subset of what is a

Re: [OMPI users] Fortran support not installing

2006-05-24 Thread Michael Kluskens
On May 24, 2006, at 11:24 AM, Terry Reeves wrote: Hello, everyone. I have g95 fortran installed. I'm told it works. I'm doing this for some grad students, I am not myself a programmer or a unix expert but I know a bit more than the basics. This is a Mac OS X dual G5 processor xserve runn

Re: [OMPI users] Fortran support not installing

2006-05-24 Thread Jeff Squyres (jsquyres)
Open MPI does require the F77 bindings for F90 support. Hence, if you want to use g95, you also need to have the F77 bindings configured and built. >From the output you sent, you ran "./configure FC=g95". Configure did not find a valid F77 compiler, and therefore skipped both the F77 and F90 bi

[OMPI users] .bashrc or .bash_profile

2006-05-24 Thread 杨科
Hi,all. I set OMPI bin directory to PATH environment variable in .bash_profile, however,it seems that doesn't work when I issue "ssh node1 orted" at node0. When I set bin directory in .bashrc, it works. I think we can find "orted" from PATH wherever it is set,because users may update PATH in ma

[OMPI users] Fortran support not installing

2006-05-24 Thread Terry Reeves
Hello, everyone. I have g95 fortran installed. I'm told it works. I'm doing this for some grad students, I am not myself a programmer or a unix expert but I know a bit more than the basics. This is a Mac OS X dual G5 processor xserve running OS X Server 10.4.6. I have xcode 2.2 installed which give

Re: [OMPI users] wrong predefined MPI_PROD

2006-05-24 Thread Jeff Squyres (jsquyres)
Blast! How embarrassing. I missed that one last night in my haste to fix the problem. Thanks... > -Original Message- > From: users-boun...@open-mpi.org > [mailto:users-boun...@open-mpi.org] On Behalf Of Bert Wesarg > Sent: Wednesday, May 24, 2006 2:15 AM > To: Open MPI Users > Subje

[OMPI users] mca_btl_sm_send: write fifo failed:,errno=9

2006-05-24 Thread Mykael BOUQUEY
[root@mymachine]# ompi_info Open MPI: 1.1a6 Open MPI SVN revision: r9950 Open RTE: 1.1a6 Open RTE SVN revision: r9950 OPAL: 1.1a6 OPAL SVN revision: r9950 Prefix: /root/usr/local Configured architecture: i686-pc-linux-gnu

Re: [OMPI users] wrong predefined MPI_PROD

2006-05-24 Thread Bert Wesarg
hello, i see the fix, but why isn't line 339 changed? https://svn.open-mpi.org/trac/ompi/browser/trunk/ompi/op/op_predefined.c?rev=10023#L339 bert On Tue, 23 May 2006, Brian Barrett wrote: > On May 23, 2006, at 11:49 AM, Bert Wesarg wrote: > > > Hello, > > > > the predfined mpi op MPI_PROD is