Re: [OMPI users] [EXTERNAL] Possible memory leak(s) in OpenMPI 1.6.3?

2013-01-21 Thread Barrett, Brian W
Thanks for the bug report. I've fixed the leak in our development branch and it should make its way to both the 1.6 and 1.7 release series. Brian On 1/21/13 6:53 AM, "Victor Vysotskiy" mailto:victor.vysots...@teokem.lu.se>> wrote: Since my question unanswered for 4 days, I repeat the origina

Re: [OMPI users] Romio and OpenMPI builds

2013-01-21 Thread Rob Latham
On Fri, Dec 07, 2012 at 11:44:05PM -0500, Eric Chamberland wrote: > >--with-io-romio-flags='--with-file-system=testfs+ufs+nfs+lustre' > exactly. > > > >We have Lustre, local filesystems (ufs), and NFSv3 and NFSv4 clients. So > >that list should be good for our site. > > If you have any choice at

Re: [OMPI users] Invalid filename?

2013-01-21 Thread Rob Latham
On Mon, Jan 21, 2013 at 11:18:02AM -0800, Ralph Castain wrote: > All we do is import the ROMIO distribution, so I'm afraid you'd have to make > that request of them. You rang? ROMIO parses filenames, as the quoted standard suggests it ought to. If it finds a : it parses the preceding string as a

Re: [OMPI users] Invalid filename?

2013-01-21 Thread Ralph Castain
All we do is import the ROMIO distribution, so I'm afraid you'd have to make that request of them. On Jan 21, 2013, at 10:38 AM, Eric Chamberland wrote: > On 01/21/2013 01:00 PM, Reuti wrote: >> although you can create such files in Linux, it's not portable. >> >> http://en.wikipedia.org/wiki

Re: [OMPI users] Invalid filename?

2013-01-21 Thread Eric Chamberland
On 01/21/2013 01:00 PM, Reuti wrote: although you can create such files in Linux, it's not portable. http://en.wikipedia.org/wiki/Filename (Reserved characters and words) Best is to use only characters from POSIX portable character set for filenames. Especially as this syntax with a colon is u

Re: [OMPI users] Invalid filename?

2013-01-21 Thread Reuti
Hi, Am 21.01.2013 um 15:55 schrieb Eric Chamberland: > If you try to open a file with a ":" in the filename (ex: "file:o"), you get > an MPI_ERR_NO_SUCH_FILE. > > ERROR Returned by MPI: 42 > ERROR_string Returned by MPI: MPI_ERR_NO_SUCH_FILE: no such file or directory > > Just launch the simpl

Re: [OMPI users] OMPI 1.6.3, InfiniBand and MTL MXM; unable to make it work!

2013-01-21 Thread Francesco Simula
Hi Mike, that is a question I'm not sure I can answer, because I didn't install the OFED package; looking for it on the OpenFabrics.org site I see that the archive contains the packages that in my distro come one by one, e.g. 'libmthca-1.0.5-6.el5.rpm', 'libmlx4-1.0.1-7.el5.rpm', etc. The com

[OMPI users] Invalid filename?

2013-01-21 Thread Eric Chamberland
Hi, If you try to open a file with a ":" in the filename (ex: "file:o"), you get an MPI_ERR_NO_SUCH_FILE. ERROR Returned by MPI: 42 ERROR_string Returned by MPI: MPI_ERR_NO_SUCH_FILE: no such file or directory Just launch the simple test code attached to see the problem. MPICH has the same

Re: [OMPI users] OMPI 1.6.3, InfiniBand and MTL MXM; unable to make it work!

2013-01-21 Thread Francesco Simula
Hi Mike, thanks for the help; yes, the version of MXM has 'centos5u7' in its name, I thought it to be the best match to my Centos 5.8 since there is none signed 'centos5u8' and installing 'centos6u0' fails complaining of different versions for GLIBC. The output of 'ibv_devinfo -v' for both ma

[OMPI users] Possible memory leak(s) in OpenMPI 1.6.3?

2013-01-21 Thread Victor Vysotskiy
Since my question unanswered for 4 days, I repeat the original post. Dear Developers, I am running into memory problems when creating/allocating MPI's window and its memory frequently. Below is listed a sample code reproducing the problem: #include #include #define NEL8 #define NTIMES 10

Re: [OMPI users] Help: OpenMPI Compilation in Raspberry Pi

2013-01-21 Thread George Bosilca
Great, I pushed everything upstream: - trunk (r27882) - prepared a patch for the 1.6 (https://svn.open-mpi.org/trac/ompi/ticket/3469) - requested a CMR for the 1.7 (https://svn.open-mpi.org/trac/ompi/ticket/3470) Thanks for your help, George. On Jan 21, 2013, at 07:56 , Lee Eric wrote: >

Re: [OMPI users] problem with groups and communicators in openmpi-1.6.4rc2

2013-01-21 Thread Siegmar Gross
Hi > > I used your test code to confirm it also fails on our trunk - > > it looks like someone got the reference count wrong when > > creating/destructing groups. > > No, the code is not MPI compliant. > > The culprit is line 254 in the test code where Siegmar manually > copied the group_comm_wo

Re: [OMPI users] Help: OpenMPI Compilation in Raspberry Pi

2013-01-21 Thread Lee Eric
Thank you mate. This patch works quite well on my Raspberry Pi w/o any error. Can we put them in the upstream? Thanks. Eric On Mon, Jan 21, 2013 at 12:07 AM, George Bosilca wrote: > Eric, > > What do you think about the patch attached to ticket #3469 > (https://svn.open-mpi.org/trac/ompi/ticke