[OMPI users] OSX: dyld: Symbol not found: _orte_daemon

2011-11-08 Thread Christophe Peyret
Hello, I am trying to run a program on a cluster composed with Apple Xserve running 10.5.8 (Leopard). 1) I am using openmpi-1.4.4 compiled with Intel ifort and icc (V12) (/opt is a share point mounted in /Network/opt with NFS) ./configure --prefix=/opt/openmpi-1.4.4

Re: [OMPI users] EXTERNAL: Re: How to set up state-less node /tmp for OpenMPI usage

2011-11-08 Thread Jeff Squyres
On Nov 7, 2011, at 12:12 PM, Blosch, Edwin L wrote: > Thanks for the valuable input. I'll change to a wait-and-watch approach. > > The FAQ on tuning sm says "If the session directory is located on a network > filesystem, the shared memory BTL latency will be extremely high." And the > title is

Re: [OMPI users] OSX: dyld: Symbol not found: _orte_daemon

2011-11-08 Thread Ralph Castain
The problem is that the prefix you configured with doesn't match the prefix you are providing: configure: prefix = /opt/openmpi-1.4.4 running: prefix = /Network/opt/openmpi-1.4.4 The two have to match in order for the libraries to be found. On Nov 8, 2011, at 6:01 AM, Christophe Peyret wrot

Re: [OMPI users] EXTERNAL: Re: How to set up state-less node /tmp for OpenMPI usage

2011-11-08 Thread Jeff Squyres
We talked about this issue on the weekly OMPI engineering teleconf today. It seems like it would be a good idea to bring over the new shared memory revamp to the v1.5 series before it transitions to v1.6 so that it can avoid network-mounted /tmp filesystem issues. LANL will be evaluating this;

[OMPI users] Socket ports

2011-11-08 Thread Jeffrey A Cummings
I'm attempting to launch my app via mpirun and a host file to use nodes on multiple 'stand-alone' servers. mpirun is able to launch my app on all requested nodes on all servers, but my app doesn't seem to be able to communicate via the standard MPI api calls (send , recv, etc). The problem se

[OMPI users] Problem building OpenMPI 1.4.4 with PGI 11.7 compilers

2011-11-08 Thread Gustavo Correa
Dear OpenMPI pros When I try to build OpenMPI 1.4.4 with PGI compilers 11.7 [pgcc, pgcc, pgfortran] I get the awkward error message on the bottom of this email. I say awkward because I assigned the value 'shanghai-64' to the '-tp' flag, as you can see from the successful 'libtool:compile' comman

Re: [OMPI users] Problem building OpenMPI 1.4.4 with PGI 11.7 compilers

2011-11-08 Thread Samuel K. Gutierrez
Hi, I think I've seen this before. I can't speak to the details surrounding this issue, but when I upgraded to the newest version of libtool, the problem went away . Take a look at "Use of GNU m4, Autoconf, Automake, and Libtool" in our HACKING file. libtool-2.4.2.tar.gz **should** work, if t

Re: [OMPI users] Problem building OpenMPI 1.4.4 with PGI 11.7 compilers

2011-11-08 Thread Gustavo Correa
Thank you, Samuel I was hoping not to have to change my Gnu auto tools in the cluster. I remain a bit skeptical that libtool is the main culprit. Somehow OpenMPI 1.4.3 builds fine in the very same computer with the same libtool, same PGI 11.7, same compiler flags. In the OMPI 1.4.3 make log there

[OMPI users] [OMPI devel] Open MPI BOF

2011-11-08 Thread George Bosilca
Folks, Wednesday November 15th at 12:15 PST, we will have an Open MPI BOF. We will have two guest speakers: Rolf vandeVaart from NVIDIA and Shinji Sumimoto from the K-computer. If you are at SC, you are all invited to participate to this annual event. Blend for a moment with our user community,

Re: [OMPI users] Problem building OpenMPI 1.4.4 with PGI 11.7 compilers

2011-11-08 Thread Jeff Squyres
Sam -- The production tarballs are pre-Autotools-bootstrapped; the end user doesn't even have to have the GNU autotools installed at all. As such, it doesn't matter what version of OMPI they have installed. On Nov 8, 2011, at 4:24 PM, Samuel K. Gutierrez wrote: > Hi, > > I think I've seen

Re: [OMPI users] Problem building OpenMPI 1.4.4 with PGI 11.7 compilers

2011-11-08 Thread Jeff Squyres
It looks like we added a patch to the libtool bootstrap in the 1.4.4 tarball (because we're using a quite old version of Libtool to build that tarball) in r24224: https://svn.open-mpi.org/trac/ompi/changeset/24224 This was to close CMR https://svn.open-mpi.org/trac/ompi/ticket/2670, which w