[OMPI users] Performance Issues on SMP Workstation

2017-02-01 Thread Andy Witzig
Hi all, I’m testing my application on a SMP workstation (dual Intel Xeon E5-2697 V4 2.3 GHz Intel Broadwell (boost 2.8-3.1GHz) processors 128GB RAM) and am seeing a 4x performance drop compared to a cluster system with 2.6GHz Intel Haswell with 20 cores / node and 128GB RAM/node. Both applicat

Re: [OMPI users] Performance Issues on SMP Workstation

2017-02-01 Thread Andy Witzig
> By the way, the workstation has a total of 36 cores / 72 threads, so using > mpirun > -np 20 is possible (and should be equivalent) on both platforms. > > Thanks, > cap79 > >> On Feb 1, 2017, at 2:52 PM, Andy Witzig wrote: >> >> Hi all, >> &g

Re: [OMPI users] Performance Issues on SMP Workstation

2017-02-01 Thread Andy Witzig
see noticeable differences using fillup vs round robin, not 4x though. Fillup is more shared memory use while round robin uses more infinniband. Doug > On Feb 1, 2017, at 3:25 PM, Andy Witzig wrote: > > Hi Tom, > > The cluster uses an Infiniband interconnect. On the cluster

Re: [OMPI users] Performance Issues on SMP Workstation

2017-02-01 Thread Andy Witzig
hy the performance is > different. > > On Feb 1, 2017, at 2:46 PM, Andy Witzig wrote: > > Honestly, I’m not exactly sure what scheme is being used. I am using the > default template from Penguin Computing for job submission. It looks like: > > #PBS -S /bin/bash > #PB

Re: [OMPI users] Performance Issues on SMP Workstation

2017-02-01 Thread Andy Witzig
Feb 1, 2017, at 2:46 PM, Andy Witzig <mailto:cap1...@icloud.com>> wrote: > > Honestly, I’m not exactly sure what scheme is being used. I am using the > default template from Penguin Computing for job submission. It looks like: > > #PBS -S /bin/bash > #PBS -q T30 >

Re: [OMPI users] Performance Issues on SMP Workstation

2017-02-01 Thread Andy Witzig
17 at 6:36 PM, Andy Witzig wrote: > Thank for the idea. I did the test and only get a single host. > > Thanks, > Andy > > On Feb 1, 2017, at 5:04 PM, r...@open-mpi.org wrote: > > Simple test: replace your executable with “hostname”. If you see multiple > hosts come ou

Re: [OMPI users] Performance Issues on SMP Workstation

2017-02-06 Thread Andy Witzig
oth systems? Do you have performance tools available on the systems where you can see in which part of the Program the time is lost? Common tools would be Score-P/ Vampir/CUBE, TAU, extrae/Paraver. Best Christoph On Wednesday, 1 February 2017 21:09:28 CET Andy Witzig wrote: > Thank you, Benne

Re: [OMPI users] Performance Issues on SMP Workstation

2017-02-06 Thread Andy Witzig
less likely to interfere with each other. -Tom From: users [mailto:users-boun...@lists.open-mpi.org] On Behalf Of Andy Witzig Sent: Monday, February 06, 2017 8:25 AM To: Open MPI Users Subject: Re: [OMPI users] Performance Issues on SMP Workstation Hi all, My apologies for not replying