Re: [OMPI users] compilation problem with ifort

2014-09-03 Thread Ray Sheppard
Hi Elio and everyone, I went to the EPW website and their instructions seem lacking with respect to The Quantum-Expresso 4.0.3 requirement. The EPW folks want to leverage Quantum Expresso intermediate object files. By knowing how it builds and telling you where to put their package, they

[OMPI users] 1.8.4

2014-11-12 Thread Ray Sheppard
. Ray -- Respectfully, Ray Sheppard rshep...@iu.edu http://rt.uits.iu.edu/systems/SciAPT 317-274-0016 Principal Analyst

Re: [OMPI users] 1.8.4

2014-11-12 Thread Ray Sheppard
, at 9:38 AM, Ray Sheppard <rshep...@iu.edu> wrote: Sorry to bother you directly, but do you know when y'all will release the stable version of 1.8.4? I have users asking for it and really would like to build it for them before I leave for SC. But, either way, it would be great to b

Re: [OMPI users] Problems compiling OpenMPI 1.8.4 with GCC 4.9.2

2015-01-14 Thread Ray Sheppard
s post: http://www.open-mpi.org/community/lists/users/2015/01/26177.php -- Respectfully, Ray Sheppard rshep...@iu.edu http://rt.uits.iu.edu/systems/SciAPT 317-274-00

[OMPI users] Simple openmpi-mca-params.conf question

2015-04-06 Thread Ray Sheppard
Hello list, I have been given permission to impose my usual defaults on the system. I have been reading documentation for the openmpi-mca-params.conf file. "ompi_info --param all all" did not help. All the FAQ's seem to do was confuse me. I can not seem to understand how to instantiate a

Re: [OMPI users] Simple openmpi-mca-params.conf question

2015-04-06 Thread Ray Sheppard
) or should I explicitly add the .../etc directory to a variable like CPATH? Thanks again, Ray On 4/6/2015 8:14 PM, Ralph Castain wrote: btl_tcp_if_exclude=eth2 should work On Apr 6, 2015, at 5:09 PM, Ray Sheppard <rshep...@iu.edu> wrote: Hello list, I have been given permission to imp

Re: [OMPI users] Simple openmpi-mca-params.conf question

2015-04-06 Thread Ray Sheppard
Thanks again! Ray On 4/6/2015 8:58 PM, Ralph Castain wrote: Yep - it will automatically pick it up. The file should be in the /etc directory. On Apr 6, 2015, at 5:49 PM, Ray Sheppard <rshep...@iu.edu> wrote: Thanks Ralph, The FAQ had me putting in prefixes to that line and I just

[OMPI users] Undefined ompi_mpi_info_null issue

2015-06-11 Thread Ray Sheppard
have a real good reason for believing that way. I would appreciate it if someone could explain where ompi_mpi_info_null is defined and possibly a way to tell Python about it. Thanks! Ray -- Respectfully, Ray Sheppard

Re: [OMPI users] Undefined ompi_mpi_info_null issue

2015-06-12 Thread Ray Sheppard
libmpi.so. can you run ldd /N/dc2/projects/ray/quarry/h5py/h5py-2.5.0/build/lib.linux-x86_64-2.7/h5py/_errors.so and make sure this is linked with openmpi 1.8.4 ? Cheers, Gilles On 6/12/2015 1:29 AM, Ray Sheppard wrote: Hi List, I know I saw this issue years ago but have forgotten the details.

Re: [OMPI users] Undefined ompi_mpi_info_null issue

2015-06-12 Thread Ray Sheppard
, 2015, Ray Sheppard <rshep...@iu.edu <mailto:rshep...@iu.edu>> wrote: Hi Gilles, Thanks for the reply. I completely forgot that lived in the main library. ldd doesn't show that it read my LD_LIBRARY_PATH (I also push out an LPATH variable just for fun). I f

Re: [OMPI users] Undefined ompi_mpi_info_null issue

2015-06-12 Thread Ray Sheppard
Just a follow-up. RPATH was the trouble. All is well now in the land of the climatologists again. Thanks again for the help. Ray On 6/12/2015 8:00 AM, Ray Sheppard wrote: Thanks again Gilles, You might be on to something. Dynamic libraries sound like

[OMPI users] LDBL_MANT_DIG declaration trouble

2013-04-12 Thread Ray Sheppard
Hi, I am sorry to bother everyone. I have had no trouble building 1.6.3 with the Intel compiler. Now I am having to repeat the exercise for GNU. In opal/util/arch.h (about line 260) is the function below. I am getting an error that LDBL_MANT_DIG is not declared. I can not seem to find

Re: [OMPI users] LDBL_MANT_DIG declaration trouble

2013-04-12 Thread Ray Sheppard
: It should have been defined in . Is that include file not found? You might check to ensure it was defined there. On Apr 12, 2013, at 7:09 AM, Ray Sheppard <rshep...@iu.edu> wrote: Hi, I am sorry to bother everyone. I have had no trouble building 1.6.3 with the Intel compiler. No

[OMPI users] Trouble configuring 1.7.2 for Cuda 5.0.35

2013-08-14 Thread Ray Sheppard
rwx 1 root root20 Mar 18 14:35 libnvToolsExt.so -> libnvToolsExt.so.5.0 lrwxrwxrwx 1 root root23 Mar 18 14:35 libnvToolsExt.so.5.0 -> libnvToolsExt.so.5.0.35 -rwxr-xr-x 1 root root 31280 Sep 26 2012 libnvToolsExt.so.5.0.35 -- Respectfully,

Re: [OMPI users] Trouble configuring 1.7.2 for Cuda 5.0.35

2013-08-14 Thread Ray Sheppard
n-mpi.org] On Behalf Of Ray Sheppard Sent: Wednesday, August 14, 2013 2:49 PM To: Open MPI Users Subject: [OMPI users] Trouble configuring 1.7.2 for Cuda 5.0.35 Hello, When I try to run my configure script, it dies with the following. Below it are the actual libraries in the directory

[OMPI users] btl_tcp_if_include setting

2013-10-14 Thread Ray Sheppard
Hi, I am setting up version 1.7.2 for a Cray XE-6. The build nodes have different interfaces than the compute nodes. I have been able to set it up, but users need to embed the following into their mpirun command: --mca btl_tcp_if_include ipogif0 Currently, The ompi_info shows as below. I

Re: [OMPI users] btl_tcp_if_include setting

2013-10-14 Thread Ray Sheppard
pi-mca-params.conf. Users won't have to enter it after that since we pick that file up by default. On Oct 14, 2013, at 7:27 AM, Ray Sheppard <rshep...@iu.edu> wrote: Hi, I am setting up version 1.7.2 for a Cray XE-6. The build nodes have different interfaces than the compute nodes. I ha

Re: [OMPI users] btl_tcp_if_include setting

2013-10-14 Thread Ray Sheppard
, but it does not exactly work. So, I am stuck with the TCP interface for message passing. Ray On 10/14/2013 11:28 AM, Jeff Squyres (jsquyres) wrote: Just curious -- why are you using the TCP transport on a Cray? On Oct 14, 2013, at 11:00 AM, Ray Sheppard <rshep...@iu.edu>

Re: [OMPI users] OpenMPI with Gemini Interconnect

2014-04-16 Thread Ray Sheppard
Hello, Big Red 2 provides its own MPICH based MPI. The only case where the provided OpenMPI module becomes relevant is when you create a CCMLogin instance in Cluster Compatibility Mode (CCM). For most practical uses, those sorts of needs are better addressed on the Quarry or Mason

[OMPI users] Can not turn off C++ build.

2012-11-28 Thread Ray Sheppard
won't. What is wrong? Thanks. Ray -- Respectfully, Ray Sheppard rshep...@iu.edu http://pti.iu.edu/sciapt 317-274-0016

Re: [OMPI users] Can not turn off C++ build.

2012-11-29 Thread Ray Sheppard
- #include #include using namespace std; int main(int argc, char* argv[]) { cout << "Hello, world" << endl; return 0; } - Do you need to set some environment variables before you invoke the Intel compilers? On Nov 28, 2012, at 5:03 PM, Ray Sheppard wrote: Hi Jeff

[OMPI users] Odd pipe error

2015-10-17 Thread Ray Sheppard
Hi All, We run a Cray XE/XT-7. For normal (ESM) use, Cray supplies integrated MPI libraries. However, for cluster compatibility mode, we build OpenMPI to use. Generally we use 1.8.4 but some old packages, like Jaguar, are tied to an old version (1.4.5). At the last maint, they all

Re: [OMPI users] Odd pipe error

2015-10-17 Thread Ray Sheppard
akage). So why can’t you just build the old packages against 1.8.4? On Oct 17, 2015, at 7:29 AM, Ray Sheppard <rshep...@iu.edu> wrote: Hi All, We run a Cray XE/XT-7. For normal (ESM) use, Cray supplies integrated MPI libraries. However, for cluster compatibility mode, we buil

Re: [OMPI users] Odd pipe error

2015-11-12 Thread Ray Sheppard
works. Out of curiosity: I’m unaware of any changes in the MPI definitions (there were extensions, but no breakage). So why can’t you just build the old packages against 1.8.4? On Oct 17, 2015, at 7:29 AM, Ray Sheppard <rshep...@iu.edu> wrote: Hi All, We run a Cray XE/XT-7. For norma

Re: [OMPI users] mpi_f08 Question: set comm on declaration error, and other questions

2016-08-21 Thread Ray Sheppard
Hi All, My two cents, in the old days of SGI, their compiler used to initialize declared variables, usually to zero. When users moved to a new machine, like a Cray or SP, all hell broke loose because other compilers don't. As a result, almost everyone now gives you a switch to have the

[OMPI users] Basic build trouble on RHEL7

2017-04-27 Thread Ray Sheppard
Hi All, I have searched the mail archives because I think this issue was addressed earlier, but I can not find anything useful. We are standing up a few racks of RHEL-7 on Intel to slowly migrate the cluster from RHEL6. I downloaded 2.1.0 to install. All goes well until about "CCLD

Re: [OMPI users] Basic build trouble on RHEL7

2017-04-27 Thread Ray Sheppard
? And also the libxml2-devel package? On 27 April 2017 at 21:54, Ray Sheppard <rshep...@iu.edu <mailto:rshep...@iu.edu>> wrote: Hi All, I have searched the mail archives because I think this issue was addressed earlier, but I can not find anything useful. We are

Re: [OMPI users] Basic build trouble on RHEL7

2017-04-27 Thread Ray Sheppard
The -dev packages were missing. It works now. Thanks again. Ray On 4/27/2017 5:05 PM, Ray Sheppard wrote: Ha ha, Most likely not. Theses racks have only been out of single user mode about 24 hours. I thought something simple might be missing. Thanks. Ray On 4/27/2017 5:02 PM, John

Re: [OMPI users] latest Intel CPU bug

2018-01-05 Thread Ray Sheppard
Hello All,   Please people, just drop it.  I appreciated the initial post in response to to the valid question of how these bugs might impact OMPI and message passing in general.  At this point, y'all are beating the proverbial dead horse.  If you wish to debate, please mail each other

Re: [OMPI users] know which CPU has the maximum value

2018-08-10 Thread Ray Sheppard
? thanks Diego On 10 August 2018 at 17:03, Ray Sheppard <mailto:rshep...@iu.edu>> wrote: As a dumb scientist, I would just bcast the value I get back to the group and ask whoever owns it to kindly reply back with its rank. Ray On 8/10/2018 10:49 AM, Reuti wrote:

Re: [OMPI users] know which CPU has the maximum value

2018-08-10 Thread Ray Sheppard
As a dumb scientist, I would just bcast the value I get back to the group and ask whoever owns it to kindly reply back with its rank. Ray On 8/10/2018 10:49 AM, Reuti wrote: Hi, Am 10.08.2018 um 16:39 schrieb Diego Avesani : Dear all, I have a problem: In my parallel program each CPU

Re: [OMPI users] [External] Re: OMPI returns error 63 on AMD 7742 when utilizing 100+ processors per node

2020-01-27 Thread Ray Sheppard via users
Hi All,   Just my two cents, I think error code 63 is saying it is running out of streams to use.  I think you have only 64 cores, so at 100, you are overloading most of them.  It feels like you are running out of resources trying to swap in and out ranks on physical cores.    Ray On