Re: [OMPI users] OpenMPI providing rank?

2010-08-04 Thread Eugene Loh
Eugene Loh wrote: Yves Caniou wrote: Le Wednesday 28 July 2010 15:05:28, vous avez écrit : I am confused. I thought all you wanted to do is report out the binding of the process - yes? Are you trying to set the affinity bindings yourself? If the latter, then your

Re: [OMPI users] OpenMPI providing rank?

2010-08-01 Thread Aurélien Bouteiller
Yves, In Open MPI you can have a very fine control over how the deployment is bound to the cores. For more information, please refer to the faq concerning the rankfile description (in a rankfile you can specify very precisely what rank goes on what physical PU). For a more single shot option,

Re: [OMPI users] OpenMPI providing rank?

2010-08-01 Thread Eugene Loh
Yves Caniou wrote: Le Wednesday 28 July 2010 15:05:28, vous avez écrit : I am confused. I thought all you wanted to do is report out the binding of the process - yes? Are you trying to set the affinity bindings yourself? If the latter, then your script doesn't do anything that mpi

Re: [OMPI users] OpenMPI providing rank?

2010-07-28 Thread Yves Caniou
Le Wednesday 28 July 2010 15:05:28, vous avez écrit : > I am confused. I thought all you wanted to do is report out the binding of > the process - yes? Are you trying to set the affinity bindings yourself? > > If the latter, then your script doesn't do anything that mpirun wouldn't > do, and doesn'

Re: [OMPI users] OpenMPI providing rank?

2010-07-28 Thread Yves Caniou
Le Wednesday 28 July 2010 11:34:13 Ralph Castain, vous avez écrit : > On Jul 27, 2010, at 11:18 PM, Yves Caniou wrote: > > Le Wednesday 28 July 2010 06:03:21 Nysal Jan, vous avez écrit : > >> OMPI_COMM_WORLD_RANK can be used to get the MPI rank. For other > >> environment variables - > >> http://ww

Re: [OMPI users] OpenMPI providing rank?

2010-07-28 Thread Ralph Castain
On Jul 27, 2010, at 11:18 PM, Yves Caniou wrote: > Le Wednesday 28 July 2010 06:03:21 Nysal Jan, vous avez écrit : >> OMPI_COMM_WORLD_RANK can be used to get the MPI rank. For other environment >> variables - >> http://www.open-mpi.org/faq/?category=running#mpi-environmental-variables > > Are pr

Re: [OMPI users] OpenMPI providing rank?

2010-07-28 Thread Yves Caniou
Le Wednesday 28 July 2010 06:03:21 Nysal Jan, vous avez écrit : > OMPI_COMM_WORLD_RANK can be used to get the MPI rank. For other environment > variables - > http://www.open-mpi.org/faq/?category=running#mpi-environmental-variables Are processes affected to nodes sequentially, so that I can get th

Re: [OMPI users] OpenMPI providing rank?

2010-07-28 Thread Nysal Jan
OMPI_COMM_WORLD_RANK can be used to get the MPI rank. For other environment variables - http://www.open-mpi.org/faq/?category=running#mpi-environmental-variables For processor affinity see this FAQ entry - http://www.open-mpi.org/faq/?category=all#using-paffinity --Nysal On Wed, Jul 28, 2010 at 9

[OMPI users] OpenMPI providing rank?

2010-07-27 Thread Yves Caniou
Hi, I have some performance issue on a parallel machine composed of nodes of 16 procs each. The application is launched on multiple of 16 procs for given numbers of nodes. I was told by people using MX MPI with this machine to attach a script to mpiexec, which 'numactl' things, in order to make