Re: [QE-users] Quantum espresso fails to run with La any psedupotential‏

2024-04-10 Thread Vahid Askarpour
Any reason why ATOMIC POSITIONS are specified with crystal_b instead of crystal? Cheers, Vahid On Apr 10, 2024, at 5:47 PM, Gal Cohen wrote: CAUTION: The Sender of this email is not from within Dalhousie. Dear QE users i try to run the scf calculation I provide below the program starts and

Re: [QE-users] [Phonopy error] "Parsing "scf-001.out" failed"

2024-03-02 Thread Vahid Askarpour
Shouldn’t tprnfor be set to .true. for scf calculations to get the forces? Cheers, Vahid > On Mar 2, 2024, at 4:31 PM, Paolo Giannozzi wrote: > > CAUTION: The Sender of this email is not from within Dalhousie. > > I guess you should inquire with the developers of PhonoPy, not here. > Before

Re: [QE-users] kpoints.x

2023-08-07 Thread Vahid Askarpour
calculation for a 4 4 4 1 1 1 K-grid and specify nosym=.true. in that file. At the beginning of the output, you will get a list of the 64 k-points in both crystal and cartesian. The weights are also included. See if this output agrees with what you know so far. Cheers, Vahid Vahid Askarpour Department

Re: [QE-users] kpoints.x

2023-08-07 Thread Vahid Askarpour
that this point in the wedge has another equivalent point in the BZ and that is 64 -0.875 0.875 0.875 0.00 1 The 1 in the last column means that point 64 is equivalent to point 1. Here the 5th column is zero suggesting that this point is not in the wedge. Cheers, Vahid Vahid Askarpour

Re: [QE-users] Negative frequencies for phonon dispersion in Bilayer MoS2

2023-08-04 Thread Vahid Askarpour
gone to 1.0d-22 to avoid some negative frequencies. 6. Last but not least, the PSP may be the issue. Cheers, Vahid Vahid Askarpour Department of Physics Dalhousie University Halifax, NS CANADA On Aug 4, 2023, at 8:00 AM, Vahid Askarpour wrote: If the coordinates of the atoms are correct

Re: [QE-users] Negative frequencies for phonon dispersion in Bilayer MoS2

2023-08-04 Thread Vahid Askarpour
If the coordinates of the atoms are correct for the bilayer, you just need to add vacuum by adding 15 to 20 Ang to the c value. Cheers, Vahid Vahid Askarpour Department of Physics Dalhousie University Halifax, NS CANADA On Aug 4, 2023, at 7:08 AM, Giuseppe Scala wrote: CAUTION: The Sender

[QE-users] Procedure for relaxation of antiferromagnetic Mn3Ir

2023-07-21 Thread Vahid Askarpour
Dear QE Community, Does anyone know the procedure for relaxing an antiferromagnetic structure such as Mn3Ir? There are some online materials but are mostly scf calculations and not relaxation. Any suggestions is appreciated. Thanks, Vahid Vahid Askarpour Department of Physics, Dalhousie

Re: [QE-users] Orthorhombic unit cell

2023-03-09 Thread Vahid Askarpour
Usually, if there is x-ray data on single crystals, the wyckoff positions are given there. Alternatively, one can use evolutionary algorithms such as USPEX to generate stable structures but this could be time consuming. Cheers, Vahid Vahid Askarpour Department of physics and atmospheric

[QE-users] Wrong r2r4 value for Ba in the dft-d3 code

2022-07-08 Thread Vahid Askarpour
ct value is confirmed through the Abinit code and the D3 code from Grimme’s website. The change is a factor of 100 which makes C8 off by 10,000. In our case, the D3 dispersion energy changed by a factor of 3 because of this error. Regards, Vahid Vahid Askarpour Department of physics and atm

Re: [QE-users] Missing subroutine in QE-7.0/dft-d3 folder

2022-06-20 Thread Vahid Askarpour
Thanks Paolo. I should have made my search case sensitive. Best, Vahid On Jun 20, 2022, at 9:26 AM, Paolo Giannozzi mailto:paolo.gianno...@uniud.it>> wrote: grep -i set_criteria *f90 ___ The Quantum ESPRESSO community stands by the Ukrainian people

[QE-users] Missing subroutine in QE-7.0/dft-d3 folder

2022-06-20 Thread Vahid Askarpour
(3) end subroutine SET_CRITERIA Thank you, Vahid Vahid Askarpour Department of physics and atmospheric science Dalhousie University Halifax, NS CANADA ___ The Quantum ESPRESSO community stands by the Ukrainian people and expresses its concerns about

[QE-users] A question regarding s8 in the dft-d3 code

2022-06-19 Thread Vahid Askarpour
://doi.org/10.1002/jcc.21759) by Grimme et al. except that the s6 and s8 (s18 in the code) are missing. Actually s6 is set to 1.0 for version 4 but what about s8? Shouldn’t c8 change to s8*c8 in the above second equation? Thank you, Vahid Vahid Askarpour Department of physics and atmospheric

Re: [QE-users] Error - unknown cell_dofree ibrav

2022-04-28 Thread Vahid Askarpour
Congratulations for passing Paolo’s test of the functionality of the mailing list. Cheers, Vahid Vahid Askarpour Department of physics and atmospheric science Dalhousie University Halifax, NS CANADA On Apr 28, 2022, at 6:50 AM, remya ud mailto:remyau...@gmail.com>> wrote: CAUTION: The

Re: [QE-users] Reconstruction problem in hp.x :Error in routine reconstruct_full_chi (1)

2022-02-03 Thread Vahid Askarpour
the current method to determine U. HTH Iurii -- Dr. Iurii TIMROV Senior Research Scientist Theory and Simulation of Materials (THEOS) Swiss Federal Institute of Technology Lausanne (EPFL) CH-1015 Lausanne, Switzerland +41 21 69 34 881 http://people.epfl.ch/265334 ____

Re: [QE-users] Reconstruction problem in hp.x :Error in routine reconstruct_full_chi (1)

2022-02-03 Thread Vahid Askarpour
Hi Iurii and Iman, I tried your second test (the first test failed) using find_atpert=1 and docc_thr=1.D-15 in my input and the hp.x code perturbed all atoms and the reconstruction error was avoided. I am getting large U parameters (~60 and 20eV) for the two species and am trying to figure

Re: [QE-users] possible bug in bands calculation

2022-01-24 Thread Vahid Askarpour
and the second by 25. Cheers, Vahid Vahid Askarpour Department of physics and atmospheric science Dalhousie University Halifax, NS CANADA On Jan 24, 2022, at 1:25 PM, Aleksandra Oranskaia mailto:aleksandra.oransk...@kaust.edu.sa>> wrote: CAUTION: The Sender of this email is not from

Re: [QE-users] Reconstruction problem in hp.x

2022-01-15 Thread Vahid Askarpour
gging into the code to see if I can find the source of this crash. Cheers, Vahid On Jan 12, 2022, at 8:31 AM, Vahid Askarpour mailto:vh261...@dal.ca>> wrote: Dear Iurii, Thank you for taking the time to look at my files. Yes, I did recompile hp.x first and then pw.x for QE-6.5. I did

Re: [QE-users] Reconstruction problem in hp.x

2022-01-12 Thread Vahid Askarpour
-- Dr. Iurii TIMROV Senior Research Scientist Theory and Simulation of Materials (THEOS) Swiss Federal Institute of Technology Lausanne (EPFL) CH-1015 Lausanne, Switzerland +41 21 69 34 881 http://people.epfl.ch/265334 From: Vahid Askarpour mailto:vh261...@dal.ca&

Re: [QE-users] Reconstruction problem in hp.x

2022-01-11 Thread Vahid Askarpour
Theory and Simulation of Materials (THEOS) Swiss Federal Institute of Technology Lausanne (EPFL) CH-1015 Lausanne, Switzerland +41 21 69 34 881 http://people.epfl.ch/265334 From: users mailto:users-boun...@lists.quantum-espresso.org>> on behalf of Vahid Askarpour

[QE-users] Reconstruction problem in hp.x

2022-01-10 Thread Vahid Askarpour
this error is deeply appreciated. Thank you, Vahid Vahid Askarpour Department of physics and atmospheric science Dalhousie University Halifax, NS CANADA ___ Quantum ESPRESSO is supported by MaX (www.max-centre.eu) users mailing list users@lists.quantum

Re: [QE-users] Splitting Hubbard U directory question

2021-11-22 Thread Vahid Askarpour
ion of Materials (THEOS) Swiss Federal Institute of Technology Lausanne (EPFL) CH-1015 Lausanne, Switzerland +41 21 69 34 881 http://people.epfl.ch/265334 From: users mailto:users-boun...@lists.quantum-espresso.org>> on behalf of Vahid Askarpour mailto:vh261...

Re: [QE-users] Splitting Hubbard U directory question

2021-11-21 Thread Vahid Askarpour
In case anyone might be trying this, I ended up creating two self-consistent folders and ran step1.in in one and step2.in in the other. Cheers, Vahid > On Nov 20, 2021, at 7:07 PM, Vahid Askarpour wrote: > > Dear QE community, > > In the HP/examples/example07, the scf.in, ste

[QE-users] Splitting Hubbard U directory question

2021-11-20 Thread Vahid Askarpour
.in and step2.in at the same time in the outdir or in separate folders, only one HP subfolder is create in the outdir where step1 and step2 jobs both write to this HP subfolder. How do I create different HP subfolders for step1.in and step2.in? Thank you, Vahid Vahid Askarpour Department of physics

[QE-users] Tag "loto_2d" in QE-6.8

2021-09-15 Thread Vahid Askarpour
Dear QE Community, In line 127 of rigid.f90 in the Phonon package of QE-6.8, we see IF (loto_2d) THEN But in the online manual for ph.x 6.8, loto_2d is not described. Is this omission intentional? Is 2D splitting of LO-TO officially supported in the ph.x 6.8? Thank you, Vahid Vahid

[QE-users] Broken SOC in electron-phonon calculation in QE-6.8

2021-09-09 Thread Vahid Askarpour
The EPW forum kindly clarified that the issue is not with EPW but likely the PHonon code. Cheers, Vahid ___ Quantum ESPRESSO is supported by MaX (www.max-centre.eu) users mailing list users@lists.quantum-espresso.org

Re: [QE-users] reproducing phonon dispersion of FCC aluminum

2021-09-09 Thread Vahid Askarpour
If you refer to the sharp change in slope around K, you need to make a jump from K to U. These two points are equivalent. Attached please see one that I did a while back. Cheers, Vahid Vahid Askarpour Department of physics and atmospheric science Dalhousie University Halifax, NS CANADA

[QE-users] Broken SOC in electron-phonon calculation in QE-6.8

2021-09-08 Thread Vahid Askarpour
Dear QE Community, On the QE Github page, it states that for QE-6.8 * electron-phonon calculation in the non-colinear/spinorbit case is broken Does this refer to electron-phonon calculation with the PHonon code or with the EPW code? Thank you, Vahid Vahid Askarpour Department of physics

Re: [QE-users] Regarding Relaxing atomic positions with version 6.8

2021-08-25 Thread Vahid Askarpour
Hi Konda, I have had the same issue with the latest QE. I found that by running QE (under slurm) with the following command always avoids the cholesky issue: srun pw.x -npools $SLURM_NTASKS < relax.in > relax.out Don’t ask why because I do not know. Cheers, Vahid Vahid Askarpour Depa

Re: [QE-users] Interpolation for 2D phonons results in one imaginary branch near Gamma

2021-07-14 Thread Vahid Askarpour
BZ segments. Cheers, Vahid Vahid Askarpour Department of physics and atmospheric science Dalhousie University Halifax, NS CANADA > On Jul 14, 2021, at 12:00 PM, Thomas Brumme wrote: > > CAUTION: The Sender of this email is not from within Dalhousie. > > Did anyone try recentl

Re: [QE-users] I have failed to reproduce phonon dispersion of graphene

2021-03-30 Thread Vahid Askarpour
17:28, "Vahid Askarpour" mailto:vh261...@dal.ca>>: The coordinates of the high-symmetry points in matdyn.in should be in cartesian not crystal because you are specifying q_in_band_form=.true. Cheers, Vahid Vahid Askarpour Department of physics and atmospheric science Dalhousie Univers

Re: [QE-users] I have failed to reproduce phonon dispersion of graphene

2021-03-30 Thread Vahid Askarpour
The coordinates of the high-symmetry points in matdyn.in should be in cartesian not crystal because you are specifying q_in_band_form=.true. Cheers, Vahid Vahid Askarpour Department of physics and atmospheric science Dalhousie University Halifax, NS CANADA On Mar 30, 2021, at 11:19 AM, Evgenii

Re: [QE-users] wrong phonon dispersion at K-point

2021-01-22 Thread Vahid Askarpour
In the matdyn.in file, the coordinates of the high-symmetry points should be in cartesian not crystal coordinates since you are using q_in_band_form=.true. Cheers, Vahid Vahid Askarpour Department of physics and atmospheric science Dalhousie University Halifax, NS CANADA On Jan 22, 2021, at 12

Re: [QE-users] Bi2Se3 vc-relax and band structure calculation

2020-11-17 Thread Vahid Askarpour
The atomic positions are specified in alat units for vc-relax. They appear to be in crystal coordinates. Cheers, Vahid Vahid Askarpour Department of physics and atmospheric science Dalhousie University Halifax, NS On Nov 17, 2020, at 5:19 AM, Varrick Suezaki mailto:vsuez...@ucr.edu>>

Re: [QE-users] Query regarding k path selection, mismatching of band gap

2020-10-13 Thread Vahid Askarpour
calculation, I suggest the tetrahedron method. These are explained in the QE manual. Cheers, Vahid Vahid Askarpour Department of physics and atmospheric science Dalhousie University Halifax, NS On Oct 13, 2020, at 4:49 PM, Poonam Kaushik mailto:poonamkaushi...@gmail.com>> wrote: CAUTION: The

Re: [QE-users] Band structure

2020-09-28 Thread Vahid Askarpour
It should be filband not filbands. Cheers, Vahid Vahid Askarpour Department of physics and atmospheric science Dalhousie University Halifax, NS On Sep 28, 2020, at 1:29 PM, Menna Hasan mailto:menna.ha...@aucegypt.edu>> wrote: CAUTION: The Sender of this email is not from within Dal

Re: [QE-users] Hard PSP for copper

2020-09-24 Thread Vahid Askarpour
a cutoff of 240Ry. Cheers, Vahid > On Sep 14, 2020, at 8:56 AM, Vahid Askarpour wrote: > > Dear QE Community, > > I am attempting to generate a hard PSP for copper (to calculate the > electrical conductivity of pure copper) by including the semi-core states as > done in t

[QE-users] Hard PSP for copper

2020-09-14 Thread Vahid Askarpour
, Vahid Vahid Askarpour Department of physics and atmospheric science Dalhousie University Halifax, NS ___ Quantum ESPRESSO is supported by MaX (www.max-centre.eu/quantum-espresso) users mailing list users@lists.quantum-espresso.org https://lists.quantum

Re: [QE-users] Need a script that can convert primitive cell file file using conventional cell cif file

2020-07-17 Thread Vahid Askarpour
0.75 K_POINTS automatic 5 5 5 0 0 0 CELL_PARAMETERS angstrom -5.489549 -5.489549 0.00 -5.489549 0.00 -5.489549 -0.00 -5.489549 -5.489549 This seems to be a primitive cell. Cheers, Vahid Vahid

[QE-users] Need a script that can convert primitive cell file file using conventional cell cif file

2020-07-16 Thread Vahid Askarpour
I use the code FINDSYM (https://stokes.byu.edu/iso/findsym.php) which takes a cif file (of conventional or primitive cells) and output the primitive cell parameters. Can be used online or downloaded. Cheers, Vahid Vahid Askarpour Department of physics and atmospheric science Dalhousie

Re: [QE-users] P=********** in the output directory of quantum espresso users.

2020-06-19 Thread Vahid Askarpour
The pressure is too large, which is why it is printed as stars. You are only relaxing the atoms not the lattice constants. Is there a reason why you are not using vc-relax? Cheers, Vahid Vahid Askarpour Department of physics and atmospheric science Dalhousie University Halifax, NS Canada

Re: [QE-users] I don't know how to add empty bands and broaden my super cell

2020-06-17 Thread Vahid Askarpour
05080 10.604083 10.00 0 0 0 C 7.223291 2.628097 19.75 H 6.590292 1.997000 20.383000 H 7.856291 1.997000 19.117000 H 6.590292 3.263000 19.117000 H 7.856291 3.263000 20.383000 On Wed, 17 Jun 2020 at 19:51, Vahid Askarpour mailto:vh261...@dal.ca>&g

Re: [QE-users] I don't know how to add empty bands and broaden my super cell

2020-06-17 Thread Vahid Askarpour
Specify nbnd for bands. For broadening, check the input parameters occupations, smearing, degauss. Cheers, Vahid Vahid Askarpour Department of physics and atmospheric science Dalhousie University Halifax, NS Canada On Jun 17, 2020, at 8:44 PM, Coralie Khabbaz mailto:khabbaz.cora...@gmail.com

[QE-users] Core electron energy

2020-06-11 Thread Vahid Askarpour
Dear QE Users, Is it possible to output the core electron energy with QE? I am hoping to use the core energy as a reference for electronic band shifts as a result of atomic displacement. Thank you, Vahid Vahid Askarpour Department of physics and atmospheric science Dalhousie University

Re: [QE-users] Born charges of PbS

2020-04-16 Thread Vahid Askarpour
band you could try to compute them with wannier90 for example. regards Pietro On 15/04/20 15:05, Vahid Askarpour wrote: Hi Pietro, If I understand your argument correctly, then the same can be said of the 2 electrons of s-Pb localized just above 0eV. These 2 electrons are mainly centered

Re: [QE-users] Born charges of PbS

2020-04-15 Thread Vahid Askarpour
change, but the orbital will now lean towards the closer Pb and away from those that are now a little bit farther, this enhances the dynamical charge with respect to the oxidation number. Pietro On 14/04/20 00:54, Vahid Askarpour wrote: The attached projected DOS for PbS suggests that the Pb s-

Re: [QE-users] Born charges of PbS

2020-04-13 Thread Vahid Askarpour
w it, even if they can still belong its Bader volume. > > it looks a bit extreme but this appears to be the result. You could > compute the atomic projected density of states and see if this seems the > case. > > stefano > > On 13/04/20 17:11, Vahid Askarpour wrote: >> De

[QE-users] Born charges of PbS

2020-04-13 Thread Vahid Askarpour
) are quite different from the those of the PHONON code (-9.878 and -10.168). I am assuming that the code is correct and my logic is flawed. I would appreciate any thoughts you may have on this discrepancy. Thank you, Vahid Vahid Askarpour Department of physics and atmospheric science Dalhousie

[QE-users] Unit of velocities in Wannier90

2020-03-18 Thread Vahid Askarpour
. When we set geninterp=.true. geninterp_alsofirstder=.true. The postw90 output includes k-point coordinates (with units), energies (with units) and velocities (no units). Am I correct in assuming that these velocities are in eV*angstrom/(2pi)? Thank you, Vahid Vahid Askarpour Department

Re: [QE-users] vc-relax crashes

2020-03-15 Thread Vahid Askarpour
May be you are using an older version of QE in which cell_dofree=‘ibrav’ was not implemented? Cheers, Vahid Vahid Askarpour Department of physics and atmospheric science Dalhousie University Halifax, NS Canada On Mar 15, 2020, at 6:06 AM, Fariba Islam mailto:ezq...@gmail.com>> wrote: C

Re: [QE-users] Band structure with hybrid functionals

2019-10-28 Thread Vahid Askarpour
k-grid? Best regards, Dominik Gesendet: Samstag, 26. Oktober 2019 um 23:33 Uhr Von: "Vahid Askarpour" mailto:vh261...@dal.ca>> An: "Quantum ESPRESSO users Forum" mailto:users@lists.quantum-espresso.org>> Betreff: Re: [QE-users] Band structure with hybrid

Re: [QE-users] Band structure with hybrid functionals

2019-10-26 Thread Vahid Askarpour
I have calculated HSE band structure using the method you described. The only difference is that for the band-structure k-points, I used a weight of 0.01 instead of zero. Cheers, Vahid Vahid Askarpour Department of Physics and Atmospheric Science Dalhousie University, Halifax, NS, Canada

Re: [QE-users] Tetragolan atomic position

2019-04-13 Thread Vahid Askarpour
Why not google it? I did and here is a link: https://onlinelibrary.wiley.com/doi/pdf/10.1002/zaac.19683610110 Cheers, Vahid Vahid Askarpour Department of Physics and Atmospheric Science Dalhousie University, Halifax, NS, Canada On Apr 13, 2019, at 4:11 PM, Mahsa Soltani mailto:mahsasolta

Re: [QE-users] thermo_pw crashes with "can't open a connected unit"

2018-12-13 Thread Vahid Askarpour
is that the first structure converges in say 25 steps but the other structures go through 0 bfgs steps. They remain unconverged even though for each of them nstep should be 50. Vahid > On Dec 13, 2018, at 3:23 PM, Vahid Askarpour wrote: > > This is likely a bug in the thermo_pw code. When I u

Re: [QE-users] thermo_pw crashes with "can't open a connected unit"

2018-12-13 Thread Vahid Askarpour
This is likely a bug in the thermo_pw code. When I use “lmurn=.TRUE.”, the error disappears. However, I need to use “lmurn=.FALSE.” in order to change all the orthorhombic lattice constants and not just celldm(1). Vahid > On Dec 13, 2018, at 11:19 AM, Vahid Askarpour wrote: > >

[QE-users] thermo_pw crashes with "can't open a connected unit"

2018-12-13 Thread Vahid Askarpour
ix='tinsel', fildyn='SnSe.dyn.xml', ldisp=.TRUE. epsil=.TRUE. nq1=2, nq2=2, nq3=2, / If you have encountered this error (or possible bug), I would really appreciate hearing from you. Thank you, Vahid Vahid Askarpour Department of Physics and Atmospheric Science Dalhousie University, Halifax,

[QE-users] Hard PSP for Bismuth with ld1.x

2018-11-09 Thread Vahid Askarpour
=-145.329988 Ry, -72.664994 Ha, -1977.315048 eV) Does anyone have any suggestions for what I might be missing from the above procedure? Thank you, Vahid Vahid Askarpour Department of Physics and Atmospheric Science Dalhousie University, Halifax, NS, Canada

Re: [QE-users] Possibility of jump in k-points in Bandstructure

2018-03-21 Thread Vahid Askarpour
Looking at the plotband.f90 code, jumps are allowed: IF (dxmod > 5*dxmod_save) THEN ! ! A big jump in dxmod is a sign that the point k(:,n) and k(:,n-1) ! are quite distant and belong to two different lines. We put them on ! the same point in the graph ! kx(n)=kx(n-1) Cheers,

[QE-users] Possibility of jump in k-points in Bandstructure

2018-03-21 Thread Vahid Askarpour
structure? Thanks, Vahid Vahid Askarpour Department of Physics and Atmospheric Science Dalhousie University, Halifax, NS, Canada ___ users mailing list users@lists.quantum-espresso.org https://lists.quantum-espresso.org/mailman/listinfo/users

Re: [Pw_forum] Plotting phonon dispersion

2018-02-19 Thread Vahid Askarpour
1. You could use the ibrav=0 results. In the matdyn.in, do not use gG 50 X 50 M 50 gG 8 Instead, explicitly give the coordinates of each high-symmetry point in cartesian. 2. Four days sounds like a long time unless you are running on few nodes. If a run takes several days, you can break it

Re: [Pw_forum] Plotting phonon dispersion

2018-02-19 Thread Vahid Askarpour
ote: > > > Thank you Vahid Askarpour. > > I have two questions: > > a) Is there a problem if I don't specify amass? > > b) I have already done this procedure using the following files: > > ph.x: > > > prefix = 'Si', > epsil= .false.,

Re: [Pw_forum] Plotting phonon dispersion

2018-02-19 Thread Vahid Askarpour
', q_in_band_form=.true. / 6 ! number of high-symmetry points 0.0 0.0 0.0 200 0.0 0.0 1.0 200 etc. The coordinates of the high symmetry points should be in cartesian coordinates. 200 points will be calculated for each segment. The phonon dispersion is in the .gp output file. Cheers, Vahid Vahid

Re: [Pw_forum] Error in DOS calculation ( Spin orbit coupling )

2018-01-28 Thread Vahid Askarpour
this problem. Cheers, Vahid Vahid Askarpour Department of Physics and Atmospheric Science Dalhousie University, Halifax, NS, Canada > On Jan 28, 2018, at 2:50 PM, Anik Mondol <anikmondol1...@gmail.com> wrote: > > ___ Pw_forum mailin

Re: [Pw_forum] Relativistic NC-PP's for uranium

2018-01-26 Thread Vahid Askarpour
You can download rel-pz.0.3.1.tgz from the following website: http://theossrv1.epfl.ch/Main/Pseudopotentials The file includes norm-conserving LDA full-relativistic pseudopotentials. Also available are the PBE counterparts. Cheers, Vahid Vahid Askarpour Department of Physics and Atmospheric

Re: [Pw_forum] Does number of atoms change after optimization

2017-12-25 Thread Vahid Askarpour
The FINDSYM code (http://stokes.byu.edu/iso/findsym.php) takes as input a primitive or conventional cell and returns the primitive cell along with the Wyckoff positions, space group and primitive lattice vectors/constants. Cheers, Vahid Vahid Askarpour Department of Physics and Atmospheric

Re: [Pw_forum] Reg: Plotting of phonon dispersion with inclusion of spin-orbit coupling

2017-12-25 Thread Vahid Askarpour
heers, Vahid Vahid Askarpour Department of Physics and Atmospheric Science Dalhousie University, Halifax, NS, Canada On Dec 25, 2017, at 3:40 AM, pachineela rambabu <rams@gmail.com<mailto:rams@gmail.com>> wrote: Dear Forum, I have run a ph.x calculation for

Re: [Pw_forum] SOC pseudopotential

2017-12-05 Thread Vahid Askarpour
our guidance. It contains NC fully relativistic PS for many elements. But unfortunately It doesn't have any thing for W. Best Eliya On Tue, Dec 5, 2017 at 2:14 AM, Vahid Askarpour <vh261...@dal.ca<mailto:vh261...@dal.ca>> wrote: The website http://theossrv1.epfl.ch/Main/Pseudopotential

Re: [Pw_forum] SOC pseudopotential

2017-12-04 Thread Vahid Askarpour
The website http://theossrv1.epfl.ch/Main/Pseudopotentials has untested NC fully relativistic PSP for both PBE and PZ (LDA). They are in the files rel-pbe.0.3.1.tgz and rel-pz.0.3.1.tgz. Cheers, Vahid Vahid Askarpour Department of Physics and Atmospheric Science Dalhousie University, Halifax

Re: [Pw_forum] dos.x : segmentation fault occurred

2017-11-06 Thread Vahid Askarpour
and DeltaE, see the online dos.x manual. Cheers, Vahid Vahid Askarpour Department of Physics and Atmospheric Science Dalhousie University, Halifax, NS, Canada On Nov 6, 2017, at 4:19 PM, B S Bhushan <ecebhus...@gmail.com<mailto:ecebhus...@gmail.com>> wrote: Dear Experts, I am tryin

Re: [Pw_forum] How to calculate Mean Square Displacement (MSD)

2017-10-31 Thread Vahid Askarpour
f file using cppx. And the atoms seem to be not folded back. Can someone confirm me that? Best Regards, Nam Tran From: pw_forum-boun...@pwscf.org<mailto:pw_forum-boun...@pwscf.org> <pw_forum-boun...@pwscf.org<mailto:pw_forum-boun...@pwscf.org>>

Re: [Pw_forum] phosphorene monolayer

2017-10-05 Thread Vahid Askarpour
L_PARAMETERS ? I obtained the initial cell and atomic parameters from bulk. GAUTAM GADDEMANE DEPARTMENT OF MATERIALS SCIENCE AND ENGINEERING UNIVERSITY OF TEXAS AT DALLAS On Thu, Oct 5, 2017 at 4:19 PM, Vahid Askarpour <vh261...@dal.ca<mailto:vh261...@dal.ca>> wrote: Hi Gautam, The fo

Re: [Pw_forum] phosphorene monolayer

2017-10-05 Thread Vahid Askarpour
0.0 31.941846246 ATOMIC_POSITIONS (crystal) P0.001152971 0.0 0.015264978 P0.335395312 0.49800 0.015264292 P0.501101273 0.49800 0.081335135 P0.835350444 0.0 0.081335495 Best, Vahid Vahid Askarpour Department of Physics

[Pw_forum] Compiling qe-6.0 with -D__WANLIB

2017-08-11 Thread Vahid Askarpour
way to build QE with Wannier90 in the library mode? Thank you, Vahid Vahid Askarpour Department of Physics and Atmospheric Science Dalhousie University, Halifax, NS, Canada ___ Pw_forum mailing list Pw_forum@pwscf.org http://pwscf.org/mailman/listinfo

[Pw_forum] Compiling QE-6.0 on IOLENGTH=4 machine

2017-08-02 Thread Vahid Askarpour
code that needs to change in order to get it to work on the above machine? Thank you, Vahid Vahid Askarpour Department of Physics and Atmospheric Science Dalhousie University, Halifax, NS, Canada ___ Pw_forum mailing list Pw_forum@pwscf.org

Re: [Pw_forum] Dielectric constant at RPA level with PHONON

2017-06-30 Thread Vahid Askarpour
:degir...@sissa.it>> wrote: because somewhere in phq_readin trans = trans .OR. ldisp lrpa is only valid for the calculation of the macroscopic dielectric constant, not for the vibrational parts. stefano On 30/06/2017 01:06, Vahid Askarpour wrote: Dear QE Users, After a self consistent ca

[Pw_forum] Dielectric constant at RPA level with PHONON

2017-06-29 Thread Vahid Askarpour
you, Vahid Vahid Askarpour Department of Physics and Atmospheric Science Dalhousie University, Halifax, NS, Canada ___ Pw_forum mailing list Pw_forum@pwscf.org http://pwscf.org/mailman/listinfo/pw_forum

Re: [Pw_forum] Potential plot for SnSe

2017-06-21 Thread Vahid Askarpour
is the modulus of e1=0.333 in alat units. That’s why the x-axis runs from 0 to ~0.33. However, the origin of the plot is (0,0,0) and not x0. Thank you, Vahid On Jun 20, 2017, at 4:12 PM, Vahid Askarpour <vh261...@dal.ca<mailto:vh261...@dal.ca>> wrote: Just a correction to my pp.x in

[Pw_forum] Potential plot for SnSe

2017-06-20 Thread Vahid Askarpour
, Vahid Vahid Askarpour Department of Physics and Atmospheric Science Dalhousie University, Halifax, NS, Canada SnSe_potential.pdf Description: SnSe_potential.pdf ___ Pw_forum mailing list Pw_forum@pwscf.org http://pwscf.org/mailman/listinfo/pw_forum

Re: [Pw_forum] Overlap integral for periodic part of eigenfunction

2017-03-16 Thread Vahid Askarpour
this limitation. I will give it a try. Best wishes, Vahid > On Mar 16, 2017, at 5:14 AM, Lorenzo Paulatto > <lorenzo.paula...@impmc.upmc.fr> wrote: > > On Wednesday, March 15, 2017 11:11:54 PM CET Vahid Askarpour wrote: >> I would like to calculate the overlap inte

[Pw_forum] Overlap integral for periodic part of eigenfunction

2017-03-15 Thread Vahid Askarpour
ost (http://qe-forge.org/pipermail/pw_forum/2015-April/106663.html) suggests a similar concept for <psi_i|psi_j> but not for <u_i|u_j>. Thank you, Vahid Vahid Askarpour Department of Physics and Atmospheric Science Dalhousie University, Hali

[Pw_forum] Irreducible Representation for a list of q-points

2017-03-01 Thread Vahid Askarpour
? Vahid Askarpour Department of Physics and Atmospheric Science Dalhousie University, Halifax, NS, Canada ___ Pw_forum mailing list Pw_forum@pwscf.org http://pwscf.org/mailman/listinfo/pw_forum

Re: [Pw_forum] alpha_mix alters phonon frequencies in GaAs

2017-01-13 Thread Vahid Askarpour
s Sent from a tiny keyboard... Contact info: http://theossrv1.epfl.ch/Main/Contact On 13 Jan 2017, at 15:35, Vahid Askarpour <vh261...@dal.ca<mailto:vh261...@dal.ca>> wrote: Dear QE Community, I have compiled qe-6.0 with intel-14 and openmpi-1.6.5. In attempting to speed u

[Pw_forum] alpha_mix alters phonon frequencies in GaAs

2017-01-13 Thread Vahid Askarpour
. Thank you, Vahid Vahid Askarpour Department of Physics and Atmospheric Science Dalhousie University, Halifax, NS, Canada ___ Pw_forum mailing list Pw_forum@pwscf.org http://pwscf.org/mailman/listinfo/pw_forum

Re: [Pw_forum] Gathering 3-d arrays across pools using QE's mp_sum

2016-10-31 Thread Vahid Askarpour
Is your nkf and nkf_tot the same as nks nks_tot provided by QE environment? Could you print the nbase for each processor and see if they are the numbers expected? Ye === Ye Luo, Ph.D. Leadership Computing Facility Argonne National Laboratory 2016-10-30 18:59 GMT-05:00 Vahid Askarpour <

Re: [Pw_forum] Gathering 3-d arrays across pools using QE's mp_sum

2016-10-30 Thread Vahid Askarpour
hit the 32bit integer bug of the variable msglen. Ye === Ye Luo, Ph.D. Leadership Computing Facility Argonne National Laboratory 2016-10-30 14:25 GMT-05:00 Vahid Askarpour <vh261...@dal.ca<mailto:vh261...@dal.ca>>: Hi Ye, The changes I am making are par

Re: [Pw_forum] Gathering 3-d arrays across pools using QE's mp_sum

2016-10-30 Thread Vahid Askarpour
on of output and the copy make sure they are correct. Ye === Ye Luo, Ph.D. Leadership Computing Facility Argonne National Laboratory 2016-10-28 14:33 GMT-05:00 Vahid Askarpour <vh261...@dal.ca<mailto:vh261...@dal.ca>>: Hi Ye, Thank you for your suggestion. I tried it

Re: [Pw_forum] Gathering 3-d arrays across pools using QE's mp_sum

2016-10-28 Thread Vahid Askarpour
pool*pool_id+1:k_pool*pool_id+k_pool))=input(1:3,1:nbnds,1:k_pool) Ye === Ye Luo, Ph.D. Leadership Computing Facility Argonne National Laboratory 2016-10-28 12:29 GMT-05:00 Vahid Askarpour <vh261...@dal.ca<mailto:vh261...@dal.ca>>: Dear QE Users, I am working on some

[Pw_forum] Gathering 3-d arrays across pools using QE's mp_sum

2016-10-28 Thread Vahid Askarpour
in parallel, the output file is different from the serial run. Does the QE's mp_sum allow the above operation for a three-D array? Any hints or suggestions would be greatly appreciated. Vahid Vahid Askarpour Department of Physics and Atmospheric Science Dalhousie University, Halifax, NS, Canada

[Pw_forum] Gathering an array scattered on nodes

2016-10-25 Thread Vahid Askarpour
. Does QE have a way of writing A_bz to file? Thank you, Vahid Vahid Askarpour Department of Physics and Atmospheric Science Dalhousie University, Halifax, NS, Canada ___ Pw_forum mailing list Pw_forum@pwscf.org http://pwscf.org/mailman/listinfo

Re: [Pw_forum] Mismatch in symmetry operations for diamond

2016-09-19 Thread Vahid Askarpour
ame matrices as global variables. Paolo On Mon, Sep 19, 2016 at 2:57 PM, Vahid Askarpour <vh261...@dal.ca<mailto:vh261...@dal.ca>> wrote: Hi Paolo, I printed the other s(:,:,isym) and got the following for some of them: for s(3) 1.00 0.000E+000 0.000

Re: [Pw_forum] Mismatch in symmetry operations for diamond

2016-09-19 Thread Vahid Askarpour
(*,*) sr(:,:,isym) ENDDO Somehow, sr needs to be recalculated and it is not enough to include USE symm_base and cell_base at the top of the routine. Best, Vahid On Sep 19, 2016, at 8:37 AM, Vahid Askarpour <vh261...@dal.ca<mailto:vh261...@dal.ca>> wrote: Hi Paolo, I was attemptin

Re: [Pw_forum] Mismatch in symmetry operations for diamond

2016-09-19 Thread Vahid Askarpour
Mon, Sep 19, 2016 at 12:28 AM, Vahid Askarpour <vh261...@dal.ca<mailto:vh261...@dal.ca>> wrote: Dear QE Users, When doing relaxation on diamond, one of the symmetry operations identified by QE-5.4.0 is the following: isym = 2 180 deg rotation - cart. axis [0,0,1] cryst. s(

[Pw_forum] Mismatch in symmetry operations for diamond

2016-09-18 Thread Vahid Askarpour
rotation matrix, there seems to be a mismatch between the sr(1,1) elements. The other elements are consistent. Is this a bug or am I missing another operation embedded in the sr matrix? Thank you, Vahid Vahid Askarpour Department of Physics and Atmospheric Science Dalhousie University, Halifax, NS

[Pw_forum] Generating full BZ electronic velocities from the irreducible wedge velocities

2016-09-15 Thread Vahid Askarpour
problem. Does anyone know if there is an easy way to do so? Thank you, Vahid Askarpour Department of Physics and Atmospheric Science Dalhousie University, Halifax, NS, Canada ___ Pw_forum mailing list Pw_forum@pwscf.org http://pwscf.org/mailman

Re: [Pw_forum] nscf calculation

2016-07-10 Thread Vahid Askarpour
Dear Sushant, Shouldn’t the KPOINTS be 16 16 1 0 0 0 for an x-y sheet? Cheers, Vahid Vahid Askarpour Department of Physics and Atmospheric Science Dalhousie University, Halifax, NS, Canada > On Jul 10, 2016, at 12:52 PM, Mr. Sushant Kumar Behera > <sush...@tezu.ernet.in> wrote: &

Re: [Pw_forum] Primitive cell of anatase: Reg

2016-07-06 Thread Vahid Askarpour
-0.374 -0.125 Ti -0.249 0.374 0.125 O -0.249 0.1662468 -0.0837531 O 0.249 -0.1662468 0.0837531 O 0.249 0.4162467 -0.3337530 O -0.249 -0.4162467 0.3337530 Cheers, Vahid Vahid Askarpour Department of Physics and Atmospheric Science Dalhousie University

[Pw_forum] dvscf values in reciprocal or direct space

2016-05-01 Thread Vahid Askarpour
Dear QE Users, Does anyone know if the dvscf files put out by PHONON store values in direct space or reciprocal space? Thank you, Vahid Vahid Askarpour Department of Physics and Atmospheric Science Dalhousie University Halifax, NS, Canada

Re: [Pw_forum] Infinite loop while making EPW

2016-04-27 Thread Vahid Askarpour
Dear QE Users, I downloaded espresso-5.4.0 today and I successfully compiled EPW. I just skipped step 2. Best, Vahid > On Apr 27, 2016, at 10:59 AM, Vahid Askarpour <vh261...@dal.ca> wrote: > > Dear QE Users, > > Following my earlier post on “Zero scattering rates f

[Pw_forum] Infinite loop while making EPW

2016-04-27 Thread Vahid Askarpour
into a never-ending loop of uncompress-w90 followed by configure-w90 and then the making of the wannier package. After make[22] of the wannier package, I gave up. Are the above steps correct? Is there a way out of this loop? Thank you, Vahid Vahid Askarpour Department of Physics and Atmospheric

[Pw_forum] Zero scattering rates for bulk Ge for some k points using EPW

2016-04-26 Thread Vahid Askarpour
the limit allowed by the QE forum. Thank you, Vahid Vahid Askarpour Department of Physics and Atmospheric Science Dalhousie University Halifax, NS, Canada -- prefix = 'ge' amass(1)= 72.63 outdir = './' iverbosity = 0 elph= .true. epbwrite= .true. epbread

[Pw_forum] Invalid lattice parameters error

2009-08-18 Thread Vahid Askarpour
Dear?forum members,??? The unit cell I'm using is triclinic (a=9.127 angstrom, b=5.519 angstrom, c=7.310 angstrom, alpha=89.99, beta=89.97, gamma=53.22). From the INPUT_PW file, I have set up the following input file but upon running, I get the error message?[?from? iosys? : error

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