PDFBox - Losing Checkbox selection on “Save as” functionality of Dynamically filled PDF form

I have an issue regarding a dynamically filled PDF form losing checkbox selection on using the Saves As functionality I am describing the workflow which we are using currently to fill the PDF and subsequent issues. - We are receiving the PDF template created through "Adobe InDesign"

PDFBox - Losing Checkbox selection on “Save as” functionality of Dynamically filled PDF form

I have an issue regarding a dynamically filled PDF form losing checkbox selection on using the Saves As functionality I am describing the workflow which we are using currently to fill the PDF and subsequent issues. 1. We are receiving the PDF template created through "Adobe InDesign" from