[Users] compile instructions for funhpc

2017-04-11 Thread Roland Haas
Hello Erik, do you have up to date (ie post cmake) instruction on how to compile funhpc on a linux machine? Yours, Roland -- My email is as private as my paper mail. I therefore support encrypting and signing email messages. Get my PGP key from http://keys.gnupg.net. pgpinKInTOdoR.pgp Descrip

Re: [Users] compile instructions for funhpc

2017-04-11 Thread Roland Haas
Hello Erik, all, > You need to install these packages: > > depends_on('cereal') > depends_on('googletest') > depends_on('hwloc') > depends_on('jemalloc') > depends_on('mpi') > depends_on('qthreads') Thank you for the list, it would have taken me a while to find out which p

Re: [Users] Einstein Toolkit Meeting Reminder

2017-04-17 Thread Roland Haas
Hello all, > http://einsteintoolkit.org/community/support/ We will use this https://hangouts.google.com/call/ahbkp5jng5ggfbflsqkmo5gsiae hangout. Yours, Roland -- My email is as private as my paper mail. I therefore support encrypting and signing email messages. Get my PGP key from http://pg

[Users] meeting minutes for 2017-04-17

2017-04-17 Thread Roland Haas
Present: Roland, Steve, Bhavesh, Peter, Erik piraha_everywhere: * there are multiple fixes in multiple branches by now * will set to "review" for branches that should be included * currently have code that reports multiple errors from .par files stampede KNL updates: * compiles ET properly on KNL

Re: [Users] Using "mpirun -np 2" make the program much slower ?

2017-04-23 Thread Roland Haas
Hello ZhiChao, sorry for the late reply. My best guess is that you are oversubscribing the compute core of your machine. By default (ie when no OMP_NUM_THREADS) variable is set, OpenMP will use all cores of a machine. So if you start the simulation with mpirun -n2 you will end up with 2 processe

[Users] Einstein Toolkit Meeting Reminder

2017-04-23 Thread Roland Haas
minutes before the meeting. Roland Haas -- My email is as private as my paper mail. I therefore support encrypting and signing email messages. Get my PGP key from http://pgp.mit.edu . pgp5JNuE4nvSo.pgp Description: OpenPGP digital signature ___ Users

[Users] meeting minutes for 2017-04-24

2017-04-24 Thread Roland Haas
Present: Frank, Roland, Bhavesh, Ian, Steve, Roberto, Vassili, Eliu, Qian Zhang, Eliu Huerta KNL on stampede: * no update yet Include double-parsing in piraha for one release: * depends a on speed impact, expect to not be a lot but want to check * add text to error message on how to disable pirah

Re: [Users] [ET Trac] [Einstein Toolkit] #2031: Option to disable Piraha

2017-04-24 Thread Roland Haas
Hello Erik, all, > I think the option should instead be to disable the old parser. The new > parser already helped us find bugs in ccl files, and the new parser is the > future. There is no known instance where the new parser silently have wrong > results. Disabling it is being too cautious. Right

Re: [Users] Einstein Toolkit Meeting Reminder

2017-04-30 Thread Roland Haas
Hello all, Qian Zhang was also scheduled to present plans for an Einstein Toolkit data vault. A tentative date for the ET workshop is the week of July 24th-28th. Yours, Roland > Hi > > Please consider joining the weekly Einstein Toolkit phone call at > 9:30 am US central time on Mondays. As us

[Users] meeting minutes for 2017-05-01

2017-05-01 Thread Roland Haas
Present: Frank, Roberto, Steve, Roland, Eloisa, Gabrielle, Bhavesh, Erik, Manuela, Yosef, Zach, Qian, Eliu, Haris, Vassili, Pablo project presentation and reporting: * Gabrielle presented plans on more formal project reporting, https://hangouts.google.com/hangouts/redirect?dest=https%3A%2F%2Fdocs.

Re: [Users] meeting minutes for 2017-05-01

2017-05-01 Thread Roland Haas
Hello all, > LSU: > https://docs.google.com/document/d/1yX3rkcnsVbSovsh8_sZaqmZ8XEgGkQzggZ-EX09rrHg/edit > * Steve Brandt has been working on a pre-sync branch of Carpet that > automates synchronization and handles it in a lazy manner. This would > eliminate one of the most tricky pieces in de

[Users] minutes on ET workshop and school at NCSA discussion of 2017-05-01

2017-05-01 Thread Roland Haas
will be prioritized, you can use ifneedsbe for secondary choices): http://doodle.com/poll/p7deb9npmgwwfbmv Please respond no later than *Thursday* as well will finalize room bookings for the lecture halls on Friday. If you would like to serve as an instructor/TA please let us (Roland Haas, Eliu

[Users] dates for Einstein Toolkit workshop and school at NCSA

2017-05-03 Thread Roland Haas
serve as a very preliminary count of the interested participants. Please respond no later than *tomorrow*, Thursday as well will finalize room bookings for the lecture halls on Friday. If you would like to serve as an instructor/TA please let us (Roland Haas, Eliu Huerta, Gabrielle Allen or just

[Users] ET School and workshop at NCSA Monday July 31st to Friday August 4th

2017-05-07 Thread Roland Haas
s on Friday. > > If you would like to serve as an instructor/TA please let us (Roland > Haas, Eliu Huerta, Gabrielle Allen or just list) know as well. > > Yours, > Roland > -- My email is as private as my paper mail. I therefore support encrypting and signing email

[Users] meeting minutes for 2017-05-08

2017-05-08 Thread Roland Haas
Present: Bhavesh, Eloisa, Frank. Gabrielle, Peter, Steve, Gela Hammerling, Ian, Roberto, Vassili, Zach, Roland, Qian Report on ET workshop planning: * planned for week starting July 31st, 3 days of school, 2 days of workshop * themes not fully decided yet, will sent out poll soon as possible (

Re: [Users] ET School and workshop at NCSA Monday July 31st to Friday August 4th

2017-05-08 Thread Roland Haas
no later than *tomorrow*, Thursday as well will finalize > > room bookings for the lecture halls on Friday. > > > > If you would like to serve as an instructor/TA please let us (Roland > > Haas, Eliu Huerta, Gabrielle Allen or just list) know as well. > > > > Yours, &g

Re: [Users] Tracer particles: Processor distribution of array

2017-05-10 Thread Roland Haas
Hello Jens, there is no support (that I would know of) for having per-variable control how the array is distributed though. Ie the choice made in the parameters affects all variables. This could be changed with changes in Carpet, at least for grid-arrays (which are the only ones you are concerned

[Users] reminder: please voice your preferences for the ET school topics at NCSA in July/August

2017-05-12 Thread Roland Haas
Hello all, please remember to fill out this: https://docs.google.com/forms/d/e/1FAIpQLSfcMSNB2TW1uNM-7ktxG_X4Jya7ah_Fb7Vv0lPiwQw_GVcOhw/viewform Google form in the next week (until including Monday May 15th) so that we can take the results into account when settling the details of the school pro

[Users] North American Einstein Toolkit School and Workshop at NCSA

2017-05-12 Thread Roland Haas
do not hesitate to contact the organizers at etk2...@ncsa.illinois.edu. Yours, Roland Haas, for the organizers ___ Users mailing list Users@einsteintoolkit.org http://lists.einsteintoolkit.org/mailman/listinfo/users

[Users] meeting minutes for 2017-05-15

2017-05-15 Thread Roland Haas
Present: Andreas , Bhavesh, Eliu, Qian, Erik, Frank, Roberto, Vassili, Roland, Steve, Ian Hangout limit: * reached again, will try alternatives at increased reate ** could try webex but no Linux client and using a phone is not convenient (eg one needs to use specific headset) ** will look into zo

Re: [Users] reminder: please voice your preferences for the ET school topics at NCSA in July/August

2017-05-15 Thread Roland Haas
Hello all, today is your last chance to voice preferences that will be taken into account to plan the North American school and workshop at NCSA. https://docs.google.com/forms/d/e/1FAIpQLSfcMSNB2TW1uNM-7ktxG_X4Jya7ah_Fb7Vv0lPiwQw_GVcOhw/viewform *Registration* for the school and the workshop wi

Re: [Users] reminder: please voice your preferences for the ET school topics at NCSA in July/August

2017-05-15 Thread Roland Haas
ck on the details) and possibly also recorded. Yours, Roland > Hi, > > Is there any plans to video record the event lectures, for people who may > not be able to attend (owing to the fact that they live in another > continent) 😊 > > Thanks, > Maitraya > > On May 1

Re: [Users] GetComponents

2017-05-18 Thread Roland Haas
Hello Ian, > With GetComponents, is it possible to have a repository checked out > only into "repos", and not symlinked somewhere else? Not sure. I suspect this is impossible. > Why is "repos" even used any more, when we have most of the > arrangements in git, and the git repos could be checked o

Re: [Users] Einstein Toolkit Meeting Reminder

2017-05-22 Thread Roland Haas
Hello all, > Tomorrow, we will use a hangout again, with the URL being posted, as > usual on this list, about 15 minutes before the meeting, and they > will be also posted on We will use the hangout URL that was already present on the wiki, namely: https://hangouts.google.com/call/g4efzinoyjevbcc

[Users] meeting minutes for 2017-05-22

2017-05-22 Thread Roland Haas
Present: Steve, Roberto, Yosef, Roland, Qian, Gabrielle Release critical bugs: * failing tests for GRHydro, CCE * Roland would like to also add the NULL pointer usage in PeriodicCarpet/CarperLib ET workshop: * program finished up, waiting for final confirmation of speakers * will (if permitted

Re: [Users] Einstein Toolkit Meeting Reminder

2017-05-29 Thread Roland Haas
Hello all, while waiting for the call to start, please consider filling out the survey for DataVault that Qian sent around: http://lists.einsteintoolkit.org/pipermail/users/2017-May/005565.html If there is time I will try and give a 5 minute update on the status of the ET workshop planning (in s

Re: [Users] Einstein Toolkit Meeting Reminder

2017-05-29 Thread Roland Haas
Hello all, we are use this URL: https://hangouts.google.com/hangouts/_/g4efzinoyjevbccho6xe2j5kvau Yours, Roland > Hello all, > > while waiting for the call to start, please consider filling out the > survey for DataVault that Qian sent around: > > http://lists.einsteintoolkit.org/pipermail/u

[Users] meeting minutes for 2017-05-29

2017-05-29 Thread Roland Haas
Present: Christian, Steve, Frank, Roland, Eliu, Gela, Roberto, Erik, Upcoming release: * no progress on test suites * leftover tickets * aim for end of June KNL status: * most KNL machines (Cori, Marconi) can be used, if slowly so * stampede is the only machine that cannot be used * single nodes

[Users] Financial support for North American Einstein Toolkit School and Workshop at NCSA

2017-05-31 Thread Roland Haas
> The Einstein Toolkit community in Europe will host a two day meeting in > Palma de Mallorca, Spain October 11-13. > > For further information please do not hesitate to contact the > organizers at etk2...@ncsa.illinois.edu. > > Yours, > Roland Haas, for the organize

[Users] meeting minutes for 2017-06-12

2017-06-12 Thread Roland Haas
Present: Bill Gabella, Frank, Roland, Erik, Qian, Vassili, Bhavesh, Roberto, Peter * Roland gave a quick overview over the school status ** program for school settled ** want lecturers to commit to abstract and topics for lecture soon * Bill Gabella introduced himself. Group effort to get ET work

[Users] sites down

2017-06-16 Thread Roland Haas
Hello all, I seem to be unable to access the trac site: https://trac.einsteintoolkit.org/ or the ET website http://www.einsteintoolkit.org/ The announced downtime (email from Frank) was two days ago. This happens from both my workstation as well as from the Blue Waters login node. Yours, Rol

[Users] meeting minutes for 2017-06-19

2017-06-19 Thread Roland Haas
Present: Steve, Roland, Ian, Roberto, Christian, Bill Gabella, Frank, Gabrielle, Eliu, Qian, Vassili ET Release: * still have outstanding problems before the release or even before large scale testing * ML testsuites still failing when computing constraints ** need to do this before the release

Re: [Users] release status

2017-06-19 Thread Roland Haas
Hello Erik, all, > Note that this has a straightforward work-around -- pass the respective > options manually. This short before a release, I recommend going with a > work-around instead of modifying Cactus's internal mechanism, which might > break things. Context: this affects the auto-build MPI

Re: [Users] release status

2017-06-19 Thread Roland Haas
Hello Erik, > You can modify the global LIBS variable. I am not sure how to achieve this given that this must happen only on Linux and must work independently of simfactory. Yours, Roland -- My email is as private as my paper mail. I therefore support encrypting and signing email messages. Get

Re: [Users] release status

2017-06-19 Thread Roland Haas
Hello all, I guess one way to handle this would also be: * add the LIBS=... workaround to the release notes * add the code to the master perl detect.pl script after the release as a bugfix (which it is) * wait a week for things to fail catastrophically * backport to release branch Yours, Rolan

Re: [Users] release status

2017-06-19 Thread Roland Haas
Hello Frank, > It's one way of doing it. It would leave a majority of users with > manual changes to their optionlist in simfactory, because the default > isn't working. I wouldn't say that. I would hope that the majority of users does not have to build OpenMPI from scratch. Mostly because that o

Re: [Users] Jenkins down due to suspected security compromise

2017-06-20 Thread Roland Haas
Hello Ian, > The same 5 tests that had been failing before are still failing, but > I don't see any failures in McLachlan. > > GRHydro.GRHydro_test_shock_weno/1procs > GRHydro.GRHydro_test_shock_weno/2procs > SphericalHarmonicRecon.regression_test/2procs > SphericalHarmo

Re: [Users] Jenkins down due to suspected security compromise

2017-06-20 Thread Roland Haas
Hello Frank, > Is SphericalHarmonicReconGen doing something strange with the Cactus > infrastructure, or does this more point to some memory garbage? Are you on the newest version of CactusUtils, in particular have: 1ea4f65 - NaNChecker: fix handling of variables without storage (26 hours ago) h

Re: [Users] HDF5 3D output separate time files

2017-06-22 Thread Roland Haas
Hello Hayley, > Is there another way to separate my 3D HDF5 output into one file per > snapshot? One file per snapshot with output from all processors is likely not (easily) possible. Similarly there is currently no code in CarpetIOHDF5 for creating a new file every N output cycles. > Any help an

[Users] meeting minutes for 2017-06-26

2017-06-26 Thread Roland Haas
Present: Frank, Roberto, Roland, Christian, Chris Evans, Andres, Peter McLachlan testsuites: * Chris at GT looking into this * Frank will also ask Peter GRHydro: * testsuites still failing * remove fast-math from Ubuntu option list until a workaround/fix is found KNL: * progress getting it to

Re: [Users] North American Einstein Toolkit School and Workshop at NCSA

2017-06-27 Thread Roland Haas
tion you would like to give. > > The Einstein Toolkit community in Europe will host a two day meeting in > Palma de Mallorca, Spain October 11-13. > > For further information please do not hesitate to contact the > organizers at etk2...@ncsa.illinois.edu. > > Yours, &g

[Users] topics for North American Einstein Toolkit workshop

2017-07-02 Thread Roland Haas
Hello all, the workshop will be starting soon and in order to not lose time organizing the work items, please have a look at https://docs.google.com/document/d/1u4-EgQM3DngPa0QfPoHZGVJy69jDrMvbmxOgxFmaOfg and *add* your own interests and suggestions to the google doc. This will help you to se

[Users] meeting minutes for 2017-07-03

2017-07-03 Thread Roland Haas
Present: Peter, Frank, Christian, Roberto, Ian, Bhavesh, Vassili, Steve ET release: * ML issues: ** -O0 and -O1 produce results as in correct values ** printf does make it work as well ** -O2 shows the issue but cannot be debugged due to most variables being optimized out ** has a bit of a feel o

Re: [Users] meeting minutes for 2017-07-03

2017-07-03 Thread Roland Haas
Hello all, you can find a first batch of testsuite results here: http://einsteintoolkit.org/testsuite_results/index.php so far nothing major, most of the failures are the usual suspects. Cori, comet and edison failed to run anything which could be a simfactory issue or me not setting eg allocat

Re: [Users] meeting minutes for 2017-07-03

2017-07-05 Thread Roland Haas
Hello all, for those of you interested in meeting up for the testsuite status and release, let's meet in the ET phone call hangout: https://hangouts.google.com/hangouts/_/5jduv5dbzvhkhf7opttodyqlduu Yours, Roland > Hello all, > > you can find a first batch of testsuite results here: > > http:

Re: [Users] meeting minutes for 2017-07-03

2017-07-05 Thread Roland Haas
Hello all, Present: Ian, Roberto, Roland Current status is mostly good, with few failures per machine. Comet failures are almost certainly due to (known) file system bug. BlueWaters (and all IDAxiBrillBH) failures may be due to using uninitialized arrays in IDAxiBrillBH, Roland is investigating.

Re: [Users] meeting minutes for 2017-07-03

2017-07-05 Thread Roland Haas
Hello all, > Some remarks: > > - What machine is 105aff02? Machines with just hexadecimal names are my laptops. > - Why are the Dissipation testsuites failing on > BW/Comet/Edison/Cori/Golub/Hydra? (ADMConstraints? ... see below) On > BW they don't seem to produce output at all, but on the other

Re: [Users] North American Einstein Toolkit School and Workshop at NCSA

2017-07-10 Thread Roland Haas
cs as well as register > > a title and abstract for a 5 minute presentation you would like to give. > > > > The Einstein Toolkit community in Europe will host a two day meeting in > > Palma de Mallorca, Spain October 11-13. > > > > For further information please do n

Re: [Users] Einstein Toolkit Meeting Reminder

2017-07-10 Thread Roland Haas
Hello Steve, > Please consider joining the weekly Einstein Toolkit phone call at > 9:30 am US central time on Mondays. > > https://docs.einsteintoolkit.org/et-docs/Main_Page > > Sorry for the short notice. The hangout does not let me join. My guess is you created one using your LSU gooble accoun

Re: [Users] Einstein Toolkit Meeting Reminder

2017-07-10 Thread Roland Haas
Hello Ian, all > On 10 Jul 2017, at 16:22, Steven R. Brandt wrote: > > > Hi > > > > Please consider joining the weekly Einstein Toolkit phone call at > > 9:30 am US central time on Mondays. > > > > https://docs.einsteintoolkit.org/et-docs/Main_Page > > > > Sorry for the short notice. > > H

Re: [Users] Einstein Toolkit Meeting Reminder

2017-07-10 Thread Roland Haas
Hello all, > I guess those who set up a telecon in the past know how to do this, and > others don't since Google applies some strange rules. Can we add respective > instructions (for setting up a telecon, and for giving feedback if it > doesn't work) to the wiki? Basically: log out of *all* your g

[Users] meeting minutes for 2017-07-10

2017-07-10 Thread Roland Haas
Present: Bhavesh, Eloisa, Ian, Roberto, Steve, Vassili, Roland, Erik, Peter ET release: * ML ADM constraints: have patch to handle this, needs to run on cluster, git hash b051a5d3, Peter and Steve will fix the regex which is a bit too * Roberto will add simfactory option lists for Marconi and

Re: [Users] North American Einstein Toolkit School and Workshop at NCSA

2017-07-13 Thread Roland Haas
you would like to give. > > > > The Einstein Toolkit community in Europe will host a two day meeting in > > Palma de Mallorca, Spain October 11-13. > > > > For further information please do not hesitate to contact the > > organizers at etk2...@ncsa.illinois.edu. > >

Re: [Users] Einstein Toolkit Meeting Reminder

2017-07-17 Thread Roland Haas
Hello all, > - Eloisa suggested to collect "usage information" about Blue Waters on a > dedicated wiki page, but we'll wait on Roland to see if he agrees. > (Using Blue Waters seems to involve more 'setup-work' than other >clusters, and certainly more than everyone who tried at first >

Re: [Users] Einstein Toolkit Meeting Reminder

2017-07-17 Thread Roland Haas
Hello Eloisa, all, > How about the students? Will they receive this information on the first > day? Should we schedule a separate session for getting started with BW, > before we move to the exercise parts? Yes this will be made publicly eventually. In particular the handout and the folder that it

[Users] initial data for gauge wave test from apples with apples paper

2017-07-20 Thread Roland Haas
Hello all, I am trying to set up the gauge wave test from the apples with apples paper https://arxiv.org/abs/0709.3559 "Appendix A.3. Gauge wave testbed". While these are simple enough the coding up the ADM variables is not a big deal, I would still ideally avoid this potential source of error an

[Users] meeting minutes for 2017-07-24

2017-07-24 Thread Roland Haas
Present: Chris Evans, Peter, Steve, Erik, Gabrielle, Eliu, Roberto, Vassili, Yosef, Roland * will ask for agenda items on Thursdays before the call, will create a wiki page for it * will start inclusion process for RNSID, Roberto will create pull request ET Workshop: * Steve will contact jupy

[Users] work items for North American Einstein Toolkit workshop

2017-07-24 Thread Roland Haas
Hello all, the workshop will be starting soon and in order to not lose time organizing the work items, please have a look at https://docs.google.com/document/d/1u4-EgQM3DngPa0QfPoHZGVJy69jDrMvbmxOgxFmaOfg and add the projects that you intent to work on during the workshop. This will help you t

[Users] Image links in wiki

2017-07-27 Thread Roland Haas
Hello all, does anyone know how to use an image as a link label on docs.einsteintoolkit.org ? Our wiki is old (version 1.8 from 2006) so eg the link=Xxx syntax does not work unfortunately. Yours, Roland -- Sent from my Android device with K-9 Mail. Please excuse my brevity. ___

[Users] Live stream of North American Einstein Toolkit School and Workshop at NCSA

2017-07-28 Thread Roland Haas
Hello all, the North American Einstein Einstein Toolkit School and Workshop will take place on Monday, July 31st, 9am CT. For those of you who cannot join in person, you can watch a live web-cast of the lectures on YouTube http://go.illinois.edu/etk17 . For further information an on how to join t

[Users] meeting minutes for 2017-08-07

2017-08-07 Thread Roland Haas
Present: Steve, Yosef, Roland, Zach, Yu Feng, Ian, Eloisa, Qian, Report from summer school and workshop: * Summer school recordings etc. are here: https://docs.einsteintoolkit.org/et-docs/NCSAETK2017/setup * provided feedback information summary collected from users * Roland will add his hand-w

Re: [Users] Users Digest, Vol 89, Issue 5

2017-08-11 Thread Roland Haas
Hello Mikael, > I did some small edits of the single linux box documentation > regarding the local machine specific settings and where to find it. Thank you. Documentation updates are always very welcome. Yours, Roland -- My email is as private as my paper mail. I therefore support encrypting a

Re: [Users] wget from google drive

2017-08-11 Thread Roland Haas
Hello Oleg, > There was a question during the Einstein Toolkit workshop about > problems with downloading files from Google Drive with wget. If the > file is shared via public link, it is not very hard, i.e. you need to > specify the object ID: > >wget -O > https://drive.google.com/uc?id=&ex

Re: [Users] [Einstein Toolkit] #2067: Tov collapse sim not working

2017-08-17 Thread Roland Haas
Hello Michael, unfortunately responding via email does not add a comment to the ticket. So best is to use the web-form which also lets you add attachments. https://trac.einsteintoolkit.org/ticket/2067 https://trac.einsteintoolkit.org/attachment/ticket/2067/?action=new&attachfilebutton=Attach+fil

Re: [Users] error when I trying to add atmosphere to BBH evolution

2017-08-18 Thread Roland Haas
Hello all, > Could you give more details about the physics you are trying to add? > "atmosphere" in this context usually means an artificial low density > fluid in a matter simulation which helps with numerical problems that > occur when the density drops to zero. It doesn't make sense to add > i

[Users] meeting minutes for 2017-08-21

2017-08-21 Thread Roland Haas
Present: Steve, Erik, Yosef, Roland, Peter, Zach, Roberto Progress on tutorial machine at NCSA * NCSA NDS lab is willing and eager to work with ET on this * Roland will contact Craig Wilis from NDS to get this started, will CC Steve&Ian on this * Ian wanted to also try this with just a set of VM

Re: [Users] [Einstein Toolkit] #2067: Tov collapse sim not working

2017-08-22 Thread Roland Haas
Hello Mikeal, > I didn't follow any instructions, are there such? I looked at the > supplied par file (in the /par/arXiv-.3344/collapse/ directory) > and noticed there were two thorns missing: > EinsteinEvolve/CoreCollapseControl and CTGamma/CartesianCoordinates. > I found these online somewh

Re: [Users] [Einstein Toolkit] #2067: Tov collapse sim not working

2017-08-22 Thread Roland Haas
Hello Mikael, > Interesting point. I can play with the initial setup a bit. > > Where is eos state change initiated? I believe the collapse occurs > because there is a sudden lowering of the pressure !? Yes. The way this is achieved is essentially that one constructs a TOV solution with a partic

[Users] simfactory.org down

2017-08-23 Thread Roland Haas
Hello all, it seems as if the simulation factory homepage http://simfactory.org is not reachable and instead resolves to a default LSU page. Could someone at LSU please check on this from your side? Yours, Roland -- My email is as private as my paper mail. I therefore support encrypting and

Re: [Users] simfactory website access

2017-08-24 Thread Roland Haas
Hello Bhavesh, > Hi all, I am trying to access the simfactory documentation. However, > I am getting permission denied error (screenshot attached). Is the > simfactory website down or any other issue? Yes, that seems to be the case (this has been the case since at least yesterday). If you try acce

Re: [Users] Output corrupted

2017-08-25 Thread Roland Haas
Hello Ian, > Do you have any more details? I do, somehwere there must be emails either on this list or between myself and Milton Ruiz. The issue is a file system problem as one can actually use strace to track down the calls to the OS's seek and write functions and the result in files is obvious

[Users] meeting minutes for 2017-08-28

2017-08-28 Thread Roland Haas
Present: Steve, Yosef, Roland, Bill, Erik, Bruno, Eloisa, Ian, Bhavesh, Peter, Gabrielle KNL status: * Cactus supports AVX512, uncovered a bug in Carpet's prolongation op code, patch is up for review Steve will look at it, this also makes tests pass for floats rather than doubles ET workshop

Re: [Users] meeting minutes for 2017-08-28

2017-09-04 Thread Roland Haas
Hello all, > Transitioning ExternalLibs to git/svn: > * Roland has a proof of concept move to github, which lets end users > use svn for downloads. Another change (in principle separate) > modifies history so that the git repository has manageable size by > turning the tar.gz files into tar

Re: [Users] Parameter file for rotating neutron star with IllinoisGRMHD

2017-09-07 Thread Roland Haas
Hello all, > > Which initial data thorn were you planning to use? There is a rotating > > neutron star initial data thorn (RotNS, I believe) that was *proposed* > > for inclusion into the Toolkit, but none officially in the Toolkit as far > > as I am aware. Can LORENE generate such data? Not to my

[Users] meeting minutes for 2017-09-11

2017-09-11 Thread Roland Haas
Present: Steve, Anna, Yosef, Roland, Qian, Peter, Bhavesh, Gabrielle, Ian, Samuel Cactus release * People assume it is dead by now. * make a Cactus release now, while we have less pressure * check Cactus website for up-to-date information ** remove outdated information ** how can one actually edit

[Users] meeting minutes for 2017-09-18

2017-09-18 Thread Roland Haas
Present: Bill, Chris, Etik, Gabrielle, Sam, Steve, Yosef, Roland, Qian, Ian, Vassili, Peter, Tutorial machine at NCSA: * have final confirmation, about to deploy instance, should happen this week * contact current outstanding requests about current status * Roland suggests to take down tutorial

Re: [Users] Splitting CarpetHDF5 data into smaller domains

2017-09-18 Thread Roland Haas
Hello Ashok, > I have a big CarpetHDF5 3D data file which I want to visualize with ViSit. > I am only interested in a small subset of complete data. Is there any HDF5 > utility within einsteintoolkit which I can use to extract data in a smaller > sub domain ? If you want to end up with a single hd

[Users] meeting minutes for 2017-09-25

2017-09-25 Thread Roland Haas
Present: Steve, Roland, Peter, Sam, Bill, Vassili, Erik, Gabrielle, Yosef Cactusmaint email list: * mentioned all over the ET place, but no longer exists * Steve will get cactusmaint working again * Steve and Gabrielle will at leisurely pace go through page and find places where us...@cactuscode

[Users] meeting minutes for 2017-10-02

2017-10-02 Thread Roland Haas
Present: Anshu Gupta, Bill, Chris, Samual, Vassili, Yosef, Erik, Roland, Qian update on Euro ET workshop in Mallorca, Oct 11-14, http://grg.uib.es/EinsteinToolkit2017/\ * no update due to lack of organizers thorns for inclusion: GiRaFFE, RNSID. Review status? * GiRaFFE on Roland's todo * RNSID o

[Users] skipping SYNC in postrestrict

2017-10-18 Thread Roland Haas
Hello all, does anyone feel confident to state if / when one can skip the SYNC in POSTRESTRICT ? Assuming all computation by user thorns in the bin is purely pointwise of course. My run has no symmetries, and (for the sake of the argument) assume that the resolution is high enough so that the buf

Re: [Users] skipping SYNC in postrestrict

2017-10-18 Thread Roland Haas
Hello all, > My run has no symmetries, and (for the sake of the argument) assume > that the resolution is high enough so that the buffer region of level > N+1 is not affected by the grid poinst in level N that are affected by > restriction from level N+1. Uh, nevermind. This never happens. The buf

Re: [Users] compilation on marenostrum 4

2017-10-19 Thread Roland Haas
Hello Helvi, > we could compile the toolkit on MareNostrum4 without any further > problems ("unset MPI" did the trick), and I want to run some further > tests before providing the configuration script. That sounds great. There are already (outdated) marenostrum files in simfactory, you may just

Re: [Users] outreach and visibility of the toolkit

2017-10-19 Thread Roland Haas
Hello Eloisa, > You can add a playlist to the channel, and existing videos to a playlist > (which still won't appear under the "Videos" tab though). I've just done > that with the History of the ET one, and in the next few days will add > the other videos that have been advertised on the list, unl

[Users] Einstein Toolkit Meeting Reminder

2017-10-20 Thread Roland Haas
Hi Please consider joining the weekly Einstein Toolkit phone call at 9:30 am US central time on Mondays. For details on how to connect and what agenda items are to be discussed, use the link below. https://docs.einsteintoolkit.org/et-docs/Main_Page#Weekly_Users_Call --Roland -- My email is as

[Users] meeting minutes for 2017-10-23

2017-10-23 Thread Roland Haas
Present: Chris, Eloisa, Erik, Helvi, Ian, Sam, Roland, Yosef, Bill, Gabrielle NixOS: * package manager for Cactus * works a bit different from eg dpkg or rpm package manager instead it is geared towards the user that installs packages * allows sub-projects with different sets of packages (like m

Re: [Users] defining a grid function constant in time

2017-10-27 Thread Roland Haas
Hello Miguel, all, > with this commit it seems to be working fine, yes! > unless there is some other way of doing this, it would be great if > this commit could be merged to master. I think there is one more roadblock to consider: when you have 3 timelevels then Carpet will cycle the timelevels af

Re: [Users] Einstein Toolkit Meeting Reminder

2017-10-29 Thread Roland Haas
Hello all, please keep in mind that Europe changed times today and that therefore 9:30am US Central time is Mon Oct 30 15:30:00 CET 2017 (so one hour earlier). Yours, Roland > Hi > > Please consider joining the weekly Einstein Toolkit phone call at > 9:30 am US central time on Mondays. For deta

[Users] meeting minutes for 2017-10-30

2017-10-30 Thread Roland Haas
Present: Bill. Cris, Eloisa, Gabrielle, Helvi, Ian, Miguel, Sam, Steve, Roland, Qian, Ian Discussion of the EU ET Workshop: * more discussion and presentation about ET less about "only" science results * make sure US (at GT with CRA anniversary celebration) and EU (Lisbon possibly after https:

Re: [Users] Cactus Tutorial

2017-11-03 Thread Roland Haas
Hello Steve, thank you very much for providing this. This is great! > Please send comments, flames, etc. Thanks. Comments: * in the list of stuff to install, it should also cover OSX (homebrew and macports). Win10 would be nice but is maybe tricky. * how would plotting work inside of the contai

Re: [Users] Einstein Toolkit Meeting Reminder

2017-11-06 Thread Roland Haas
Hello all, > Please consider joining the weekly Einstein Toolkit phone call at > 9:30 am US central time on Mondays. For details on how to connect > and what agenda items are to be discussed, use the link below. > > https://docs.einsteintoolkit.org/et-docs/Main_Page#Weekly_Users_Call The US switc

[Users] meeting minutes for 2017-11-06

2017-11-06 Thread Roland Haas
Present: Bill, Steve, Roland, Eloisa, Miguel, Chris, Eloisa, Ian, Sam, Qian Tutorial: * needs some work to enable plotting when using console * Bill will test it * expect to get feedback from new users * would like to have it up before supercomputing (next week) ET Jenkins server: * had hardware

Re: [Users] meeting minutes for 2017-11-06

2017-11-06 Thread Roland Haas
Hello all, > I would suggest that generic.cfg should be more conservative, since > it is the default probably used by new users, and we don't want them > running into edge cases caused by aggressive optimisations. Can we > reduce the optimisation level in generic.cfg to -O2? Then we could > have

Re: [Users] Joining users email list

2017-11-06 Thread Roland Haas
Hello Sam, > This is Samuel Cupp from LSU. I would like to be added to the > users email list. I was told to just email the list to get that to > happen. This is the email address I would like added. Thanks in > advance! The list only lets members post so the fact that you could post would mea

Re: [Users] Joining users email list

2017-11-07 Thread Roland Haas
Hello Ian, > It doesn't say anything about subscribing, or needing to. As far as I know subscription is required. Try eg to post with say a gmail address that you have not subscribed to the list (eg using gmail's web interface). I have just tried this with a private email address and indeed I can

Re: [Users] Joining users email list

2017-11-07 Thread Roland Haas
Hello Steve, > I have to approve emails from non-subscribers. Unless you want to see > 100 adds for Viagra. I know (Frank already told me last time I asked a similar question) :-). I am not suggesting to open up the mailing list (unless we can get the same type of SPAM filter that the Universities

Re: [Users] Error in thorn Vectors

2017-11-13 Thread Roland Haas
Hello all, Maria has already created a ticket: https://trac.einsteintoolkit.org/ticket/2084 Yours, Roland > On 10/11/17 22:34, Hamilton, Maria wrote: > > Hello Eloisa, > > > > This is strange. I did do a fresh checkout and tried to compile it with the > > osx-homebrew.cfg but I am getting this

[Users] ET tutorial server at National Data Services Lab machines

2017-11-19 Thread Roland Haas
Hello Steve, all, Steve's jupyter based new user tutorial is almost ready for use now. The jupyter server (might be unstable right now due to migrating services) can be reached at: https://www.einsteintoolkit.nationaldataservice.org A draft of the website with instructions can be found in the

Re: [Users] ET tutorial server at National Data Services Lab machines

2017-11-19 Thread Roland Haas
Hello all, the checkout command should have been: git fetch git checkout rhaas/new-users-tutorial ie. no -b option. Yours, Roland > Hello Steve, all, > > Steve's jupyter based new user tutorial is almost ready for use now. > > The jupyter server (might be unstable right now due to migrating

[Users] meeting minutes for 2017-11-20

2017-11-20 Thread Roland Haas
Present: Eloisa, Steve, Roland, Peter, Sam, Bhavesh, Zach, Bill, Gabrielle, Antoni Ramos Buades, Ian, Cecilio García, Miguel, Qian * [RH] [SB] ET tutorial using jupyter ** maintenance going on, postponed due to maintenance * [RH] update mailing list to mailman 3.1 ** there seems to be no upgrade

Re: [Users] questions about compilation

2017-11-20 Thread Roland Haas
Hello Chia Hui Lin, looking at your output (internal compiler failure when compiling bbox.cc) this seems to be an instance of this bug: https://trac.einsteintoolkit.org/ticket/2021 there seem to be two way around this: 1. change the file edison.ini to load an older Intel compiler (version 16) 2

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