Re: [OMPI users] Clarification about OpenMPI, slurm and PMI interface

Hi Joshua, On Aug 21, 2014, at 12:28 AM, Joshua Ladd wrote: > When launching with mpirun in a SLURM environment, srun is only being used to > launch the ORTE daemons (orteds.) Since the daemon will already exist on the > node from which you invoked mpirun, this node will

Re: [OMPI users] ORTE daemon has unexpectedly failed after launch

Have i I any opportunity to run mpi jobs? Wed, 20 Aug 2014 10:48:38 -0700 от Ralph Castain : >yes, i know - it is cmr'd > >On Aug 20, 2014, at 10:26 AM, Mike Dubman < mi...@dev.mellanox.co.il > wrote: >>btw, we get same error in v1.8 branch as well. >> >> >>On Wed, Aug 20,

Re: [OMPI users] Running a hybrid MPI+openMP program

Am 20.08.2014 um 23:16 schrieb Ralph Castain: > > On Aug 20, 2014, at 11:16 AM, Reuti wrote: > >> Am 20.08.2014 um 19:05 schrieb Ralph Castain: >> Aha, this is quite interesting - how do you do this: scanning the /proc//status or alike? What

Re: [OMPI users] Running a hybrid MPI+openMP program

Hi, Am 21.08.2014 um 01:56 schrieb tmish...@jcity.maeda.co.jp: > Reuti, > > Sorry for confusing you. Under the managed condition, actually > -np option is not necessary. So, this cmd line also works for me > with Torque. > > $ qsub -l nodes=10:ppn=N > $ mpirun -map-by slot:pe=N ./inverse.exe

Re: [OMPI users] Running a hybrid MPI+openMP program

Hi, Am 20.08.2014 um 20:08 schrieb Oscar Mojica: > Well, with qconf -sq one.q I got the following: > > [oscar@aguia free-noise]$ qconf -sq one.q > qname one.q > hostlist compute-1-30.local compute-1-2.local > compute-1-3.local \ >

Re: [OMPI users] ORTE daemon has unexpectedly failed after launch

Not sure I understand. The problem has been fixed in both the trunk and the 1.8 branch now, so you should be able to work with either of those nightly builds. On Aug 21, 2014, at 12:02 AM, Timur Ismagilov wrote: > Have i I any opportunity to run mpi jobs? > > > Wed, 20

Re: [OMPI users] Clarification about OpenMPI, slurm and PMI interface

On Aug 20, 2014, at 11:46 PM, Filippo Spiga wrote: > Hi Joshua, > > On Aug 21, 2014, at 12:28 AM, Joshua Ladd wrote: >> When launching with mpirun in a SLURM environment, srun is only being used >> to launch the ORTE daemons (orteds.) Since the

Re: [OMPI users] Running a hybrid MPI+openMP program

On Aug 21, 2014, at 2:51 AM, Reuti wrote: > Am 20.08.2014 um 23:16 schrieb Ralph Castain: > >> >> On Aug 20, 2014, at 11:16 AM, Reuti wrote: >> >>> Am 20.08.2014 um 19:05 schrieb Ralph Castain: >>> > > Aha, this is quite

Re: [OMPI users] Running a hybrid MPI+openMP program

Am 21.08.2014 um 15:45 schrieb Ralph Castain: > On Aug 21, 2014, at 2:51 AM, Reuti wrote: > >> Am 20.08.2014 um 23:16 schrieb Ralph Castain: >> >>> >>> On Aug 20, 2014, at 11:16 AM, Reuti wrote: >>> Am 20.08.2014 um 19:05 schrieb

Re: [OMPI users] Running a hybrid MPI+openMP program

On Aug 21, 2014, at 6:54 AM, Reuti wrote: > Am 21.08.2014 um 15:45 schrieb Ralph Castain: > >> On Aug 21, 2014, at 2:51 AM, Reuti wrote: >> >>> Am 20.08.2014 um 23:16 schrieb Ralph Castain: >>> On Aug 20, 2014, at 11:16 AM,

Re: [OMPI users] Running a hybrid MPI+openMP program

Am 21.08.2014 um 16:00 schrieb Ralph Castain: > > On Aug 21, 2014, at 6:54 AM, Reuti wrote: > >> Am 21.08.2014 um 15:45 schrieb Ralph Castain: >> >>> On Aug 21, 2014, at 2:51 AM, Reuti wrote: >>> Am 20.08.2014 um 23:16 schrieb

Re: [OMPI users] Running a hybrid MPI+openMP program

Am 21.08.2014 um 16:50 schrieb Reuti: > Am 21.08.2014 um 16:00 schrieb Ralph Castain: > >> >> On Aug 21, 2014, at 6:54 AM, Reuti wrote: >> >>> Am 21.08.2014 um 15:45 schrieb Ralph Castain: >>> On Aug 21, 2014, at 2:51 AM, Reuti

Re: [OMPI users] Running a hybrid MPI+openMP program

Am 21.08.2014 um 16:50 schrieb Reuti: > Am 21.08.2014 um 16:00 schrieb Ralph Castain: > >> >> On Aug 21, 2014, at 6:54 AM, Reuti wrote: >> >>> Am 21.08.2014 um 15:45 schrieb Ralph Castain: >>> On Aug 21, 2014, at 2:51 AM, Reuti

[OMPI users] OpenMPI 1.8.1 to 1.8.2rc4

Hi, Would you say that softwares compiled using OpenMPI 1.8.1 need to be recompiled using OpenMPI 1.8.2rc4 to work properly ? Maxime

Re: [OMPI users] OpenMPI 1.8.1 to 1.8.2rc4

Should not be required (unless they are statically built) as we do strive to maintain ABI within a series On Aug 21, 2014, at 9:39 AM, Maxime Boissonneault wrote: > Hi, > Would you say that softwares compiled using OpenMPI 1.8.1 need to be > recompiled

Re: [OMPI users] Clarification about OpenMPI, slurm and PMI interface

Dear Ralph On Aug 21, 2014, at 2:30 PM, Ralph Castain wrote: > I'm afraid that none of the mapping or binding options would be available > under srun as those only work via mpirun. You can pass MCA params in the > environment of course, or in default MCA param files. I

Re: [OMPI users] Clarification about OpenMPI, slurm and PMI interface

On Aug 21, 2014, at 10:58 AM, Filippo Spiga wrote: > Dear Ralph > > On Aug 21, 2014, at 2:30 PM, Ralph Castain wrote: >> I'm afraid that none of the mapping or binding options would be available >> under srun as those only work via mpirun. You can

Re: [OMPI users] Clarification about OpenMPI, slurm and PMI interface

Hi FIlippo, I think you can use SLURM_LOCALID var (at least with slurm v14.03.4-2) $srun -N2 --ntasks-per-node 3 env |grep SLURM_LOCALID SLURM_LOCALID=1 SLURM_LOCALID=2 SLURM_LOCALID=0 SLURM_LOCALID=0 SLURM_LOCALID=1 SLURM_LOCALID=2 $ Kind Regards, M On Thu, Aug 21, 2014 at 9:27 PM, Ralph

[OMPI users] building openmpi 1.8.1 with intel 14.0.1

Good afternoon, I'm having trouble configuring OpenMPI for use with the Intel compilers. I run the command "./configure -prefix=/opt/openmpi/intel CC=icc CXX=icpc FC=ifort 2>&1 | tee ~/openmpi-config.out" and I notice three problems: 1. I get two instances of "Report this to

Re: [OMPI users] building openmpi 1.8.1 with intel 14.0.1

Hi Peter If I remember right from my compilation of OMPI on a Mac years ago, you need to have X-Code installed, in case you don't. If vampir-trace is the only problem, you can disable it when you configure OMPI (--disable-vt). My two cents, Gus Correa On 08/21/2014 03:35 PM, Bosler, Peter

Re: [OMPI users] building openmpi 1.8.1 with intel 14.0.1

FWIW: I just tried on my Mac with the Intel 14.0 compilers, and it configured and built just fine. However, that was with the current state of the 1.8 branch (the upcoming 1.8.2 release), so you might want to try that in case there is a difference. On Aug 21, 2014, at 12:59 PM, Gus Correa

Re: [OMPI users] [EXTERNAL] Re: building openmpi 1.8.1 with intel 14.0.1

Update: I got both OpenMPI 1.8.1 and 1.8.2rc4 to configure and build on my Mac laptop running OS X 10.9.4. Neither works on the 2-day old Mac Pro, but in investigating this I found other problems not related to OpenMPI ‹ probably hardware or OS related. Time to exercise the warranty. @Ralph :

Re: [OMPI users] Clarification about OpenMPI, slurm and PMI interface

Dear Mike, it sounds good... the description fits my purposes... I really miss this when I was reading srun man page! I will give it a try Thanks to everybody for the help and support! F > On Aug 21, 2014, at 7:58 PM, Mike Dubman wrote: > > Hi FIlippo, > > I think