Re: [votca] Missing, not found Eigen3 during VOTCA installation
On Sat, Jul 21, 2018 at 7:42 PM, Christoph Junghans wrote: > > > On Fri, Jul 20, 2018 at 18:59 'Andrey Brukhno' via votca < > votca@googlegroups.com> wrote: > >> By now I have installed SQLITE3, compiled latest version of Gromacs and >> currently installing VOTCA. >> > I think i found that issue and fixed it in: > https://github.com/votca/csg/pull/255 > and > https://github.com/votca/votca/pull/76 > > Good to know! +if(DEFINED WITH_SQLITE3 AND NOT WITH_SQLITE3) sounds weird - perhaps it's just the computer logic :) just kidding... > > BTW, the Gromacs flag -DWITH_GMX=ON did not work for me either. >> > Can you be a bit more specific what the problem was? > > I wanted VOTCA to install Gromacs along with itself as it did before (build script for v1.3 did), but the flag -DWITHGMX=ON provided to cmake did not do that (seemed like it ignored the flag), so I had to install Gromacs newest version by myself. > >> Not sure what was the issue with the flag -DWITH_SQLITE3=OFF, but my >> cmake version was below 3, so I had to reinstall it too. >> > Yeah, due to using C++11 we need CMake-3.1 now, but that should give an > error immediately. > > Yes, I was installing on my laptop and did not check the cmake version first. Then, after checking it, I was surprised it did not complain as it did on my work desktop. Andrey > Christoph > >> >> Thanks >> Andrey >> >> >> >> On Sat, Jul 21, 2018 at 1:48 AM, Christoph Junghans >> wrote: >> >>> >>> >>> On Fri, Jul 20, 2018, 16:49 'Andrey Brukhno' via votca < >>> votca@googlegroups.com> wrote: >>> Well, I tried to follow your instructions in this thread for "stable" branch. >>> Just checked, worked for me. Can you open an github issue with all the >>> details (commands, output etc.) >>> >>> Thanks, >>> >>> Christoph >>> Andrey On Fri, 20 Jul 2018 22:41 Christoph Junghans, wrote: > On Fri, Jul 20, 2018 at 3:11 PM, 'Andrey Brukhno' via votca > wrote: > > The problem is, I remembered this option for the old build script > and tried > > to use it with cmake but still got the error "sqlite3 not found". > Which version of VOTCA are you using now? > > > > > Andrey > > > > On Fri, 20 Jul 2018 21:56 Christoph Junghans, > wrote: > >> > >> On Fri, Jul 20, 2018 at 11:08 AM, 'Andrey Brukhno' via votca > >> wrote: > >> > Christoph, > >> > > >> > What is the flag for cmake not to search for SQLITE3? > >> WITH_SQLITE3=OFF, btw you can just look up the options in ccmake. > >> > >> Christoph > >> > > >> > Thanks > >> > Andrey > >> > > >> > > >> > On Thu, Jul 19, 2018 at 8:18 PM, Christoph Junghans < > jungh...@votca.org> > >> > wrote: > >> >> > >> >> On Thu, Jul 19, 2018 at 10:57 AM, 'Andrey Brukhno' via votca > >> >> wrote: > >> >> > > >> >> > > >> >> > On Thursday, July 19, 2018 at 4:48:14 PM UTC+1, Christoph > Junghans > >> >> > wrote: > >> >> >> > >> >> >> >> > >> >> >> >> > We recently fixed an issue in the Eigen3 detection: > >> >> >> >> > > >> >> >> >> > > >> >> >> >> > > >> >> >> >> > > >> >> >> >> > https://github.com/votca/votca/commit/ > 8fdcedae9b46e1739fa2ef8589cd5a8f6881d420 > >> >> >> >> > which includes: > >> >> >> >> > > >> >> >> >> > > >> >> >> >> > > >> >> >> >> > > >> >> >> >> > https://github.com/votca/tools/commit/ > 3ee8b88e6022772b843f21a04f66a5bd8bfddd09 > >> >> >> >> > > >> >> >> >> > > >> >> >> >> > > >> >> >> >> > > >> >> >> >> > https://github.com/votca/csg/commit/ > c3f9b3e2841c4b5c0eac20e4d843f6b108750ecf > >> >> >> >> > Did you use that version? > >> >> >> > > >> >> >> > > >> >> >> > No, I have not tried any newer version yet. My aim was to > get the > >> >> >> > latest > >> >> >> > release installed, which spack did succeed to do (v1.4.1). > >> >> >> But then I don't understand your original error because > votca-csg > >> >> >> 1.4.1 doesn't depend on Eigen3. > >> >> > > >> >> > > >> >> > I guess I meant (implicitly) that I tried to follow the > instructions > >> >> > for > >> >> > installation using cmake found on one of the VOTCA's webpages, > and > >> >> > that's > >> >> > when I encountered the error message about eigen3 (not sure > now what > >> >> > version > >> >> > it was, but I think 1.5.1). But then I went the spack way and > was > >> >> > satisfied. > >> >> > Since then I have not tried cmake for any other version. But I > may > >> >> > try > >> >> > on my > >> >> > home PC soon. > >> >> I see, it is a bit confusing in the README of the new > buildsystem, > >> >> hopefully that makes it more clear: > >> >> > >> >> > >> >> https://github.com/votca/votca/commit/ > 40cbeb2daf4b4647292cf423e9755125cb7c3380 > >> >> >
Re: [votca] Missing, not found Eigen3 during VOTCA installation
Ok, good to know! - Not that I could follow the workflow by the link though. Andrey On Sat, Jul 21, 2018 at 7:33 PM, Christoph Junghans wrote: > > > On Thu, Jul 19, 2018 at 09:47 Christoph Junghans > wrote: > >> On Thu, Jul 19, 2018 at 9:33 AM, 'Andrey Brukhno' via votca >> wrote: >> > >> > >> > On Thursday, July 19, 2018 at 3:27:52 PM UTC+1, Christoph Junghans >> wrote: >> >> >> >> On Wed, Jul 18, 2018 at 12:20 PM, Christoph Junghans < >> jung...@votca.org> >> >> wrote: >> >> > On Wed, Jul 18, 2018 at 12:04 PM, 'Andrey Brukhno' via votca >> >> > wrote: >> >> >> Hello, >> >> >> >> >> >> The last time I was installing the CSG package in my Ubuntu >> (up-to-date >> >> >> 2014 >> >> >> LTS) I got this error from cmake: eigen3 not found, with a >> suggestion >> >> >> to >> >> >> provide the path to it. I then downloaded the library from their >> >> >> website, >> >> >> installed it and added its include directory to both my $PATH and to >> >> >> the >> >> >> environment under the suggested name EIGEN3_INCLUDE_DIR. But cmake >> >> >> still >> >> >> complained and stopped with the same error, even when I fed it the >> >> >> flag: >> >> >> -DEIGEN3_INCLUDE_DIR=. >> >> > Just a reminder that 2014 was already 4 years ago ;-) >> > >> > >> > Thanks, up to now it did not hurt to stay with that version, but >> eventually >> > yes an upgrade is pending. :) >> > >> >> >> >> > We recently fixed an issue in the Eigen3 detection: >> >> > >> >> > https://github.com/votca/votca/commit/8fdcedae9b46e1739fa2ef8589cd5a >> 8f6881d420 >> >> > which includes: >> >> > >> >> > https://github.com/votca/tools/commit/3ee8b88e6022772b843f21a04f66a5 >> bd8bfddd09 >> >> > >> >> > https://github.com/votca/csg/commit/c3f9b3e2841c4b5c0eac20e4d843f6 >> b108750ecf >> >> > Did you use that version? >> > >> > >> > No, I have not tried any newer version yet. My aim was to get the latest >> > release installed, which spack did succeed to do (v1.4.1). >> But then I don't understand your original error because votca-csg >> 1.4.1 doesn't depend on Eigen3. >> >> > >> > BTW, when I tried to install with apt-get nothing happened: no votca >> package >> > found. Perhaps it would only work for 2016(+) Ubuntu? >> Yes, only 2016.4 and later: >> https://packages.ubuntu.com/search?keywords=votca-csg; >> searchon=names=all=all >> and v1.4.1 only in Ubuntu 18.04! >> >> > >> >> >> >> > >> >> >> >> >> >> Not sure what went wrong, but I had to use alternative way of >> >> >> installation >> >> >> via spack, and it worked eventually, although it lloked like spack >> >> >> installed >> >> >> ALL the dependencies along with VOTCA in a separate directory, >> which is >> >> >> of >> >> >> course an overkill. >> >> > That is Spack's design, so don't complain to me! And yes we need to >> >> > update the dependencies of the VOTCA package in Spack. >> >> https://github.com/spack/spack/pull/8757 >> > >> > >> > I see... Otherwise I also noticed that spack installs csg and tools >> > separately in two directories beside each other. But then VOTCARC.bash >> etc >> > occur in the tools/bin and VOTCASHARE points at votca_tools/share >> instead of >> > votca_csg/share, so the scripts/inverse are not found. I had to reset >> > VOTCASHARE correctly in my .bashrc. >> Good point I will have to think, how to fix that. I think the VOTCARC >> file should get installed to start with as csg_inverse will >> auto-detect the location (using csg_call in your PATH) if VOTCASHARE >> isn't set. > > I dropped the install of the confusing VOTCARC in: > >> https://github.com/spack/spack/pull/8771 > > Christoph > >> >> >> Christoph >> >> > >> > I mentioned this for other users to be aware. >> > >> > Andrey >> >> >> >> >> >> >> >> >> >> I suppose this post is just to notify the current developers that >> there >> >> >> might be some issue with finding an exiasting Eigen3 dir. >> >> > Thanks for letting us know, can you try if above versions fix the >> issue >> >> > for you? >> >> > >> >> > Christoph >> >> >> >> >> >> Thanks >> >> >> Andrey >> >> >> >> >> >> -- >> >> >> You received this message because you are subscribed to the Google >> >> >> Groups >> >> >> "votca" group. >> >> >> To unsubscribe from this group and stop receiving emails from it, >> send >> >> >> an >> >> >> email to votca+un...@googlegroups.com. >> >> >> To post to this group, send email to vo...@googlegroups.com. >> >> >> Visit this group at https://groups.google.com/group/votca. >> >> >> For more options, visit https://groups.google.com/d/optout. >> >> > >> >> > >> >> > >> >> > -- >> >> > Christoph Junghans >> >> > Web: http://www.compphys.de >> >> >> >> >> >> >> >> -- >> >> Christoph Junghans >> >> Web: http://www.compphys.de >> > >> > -- >> > You received this message because you are subscribed to the Google >> Groups >> > "votca" group. >> > To unsubscribe from this group and stop receiving emails from it, send >> an >> > email to votca+unsubscr...@googlegroups.com. >> > To post to this group, send email to
Re: [votca] Missing, not found Eigen3 during VOTCA installation
On Fri, Jul 20, 2018 at 18:59 'Andrey Brukhno' via votca < votca@googlegroups.com> wrote: > By now I have installed SQLITE3, compiled latest version of Gromacs and > currently installing VOTCA. > I think i found that issue and fixed it in: https://github.com/votca/csg/pull/255 and https://github.com/votca/votca/pull/76 BTW, the Gromacs flag -DWITH_GMX=ON did not work for me either. > Can you be a bit more specific what the problem was? > Not sure what was the issue with the flag -DWITH_SQLITE3=OFF, but my cmake > version was below 3, so I had to reinstall it too. > Yeah, due to using C++11 we need CMake-3.1 now, but that should give an error immediately. Christoph > > Thanks > Andrey > > > > On Sat, Jul 21, 2018 at 1:48 AM, Christoph Junghans > wrote: > >> >> >> On Fri, Jul 20, 2018, 16:49 'Andrey Brukhno' via votca < >> votca@googlegroups.com> wrote: >> >>> Well, I tried to follow your instructions in this thread for "stable" >>> branch. >>> >> Just checked, worked for me. Can you open an github issue with all the >> details (commands, output etc.) >> >> Thanks, >> >> Christoph >> >>> >>> Andrey >>> >>> On Fri, 20 Jul 2018 22:41 Christoph Junghans, >>> wrote: >>> On Fri, Jul 20, 2018 at 3:11 PM, 'Andrey Brukhno' via votca wrote: > The problem is, I remembered this option for the old build script and tried > to use it with cmake but still got the error "sqlite3 not found". Which version of VOTCA are you using now? > > Andrey > > On Fri, 20 Jul 2018 21:56 Christoph Junghans, wrote: >> >> On Fri, Jul 20, 2018 at 11:08 AM, 'Andrey Brukhno' via votca >> wrote: >> > Christoph, >> > >> > What is the flag for cmake not to search for SQLITE3? >> WITH_SQLITE3=OFF, btw you can just look up the options in ccmake. >> >> Christoph >> > >> > Thanks >> > Andrey >> > >> > >> > On Thu, Jul 19, 2018 at 8:18 PM, Christoph Junghans < jungh...@votca.org> >> > wrote: >> >> >> >> On Thu, Jul 19, 2018 at 10:57 AM, 'Andrey Brukhno' via votca >> >> wrote: >> >> > >> >> > >> >> > On Thursday, July 19, 2018 at 4:48:14 PM UTC+1, Christoph Junghans >> >> > wrote: >> >> >> >> >> >> >> >> >> >> >> > We recently fixed an issue in the Eigen3 detection: >> >> >> >> > >> >> >> >> > >> >> >> >> > >> >> >> >> > >> >> >> >> > https://github.com/votca/votca/commit/8fdcedae9b46e1739fa2ef8589cd5a8f6881d420 >> >> >> >> > which includes: >> >> >> >> > >> >> >> >> > >> >> >> >> > >> >> >> >> > >> >> >> >> > https://github.com/votca/tools/commit/3ee8b88e6022772b843f21a04f66a5bd8bfddd09 >> >> >> >> > >> >> >> >> > >> >> >> >> > >> >> >> >> > >> >> >> >> > https://github.com/votca/csg/commit/c3f9b3e2841c4b5c0eac20e4d843f6b108750ecf >> >> >> >> > Did you use that version? >> >> >> > >> >> >> > >> >> >> > No, I have not tried any newer version yet. My aim was to get the >> >> >> > latest >> >> >> > release installed, which spack did succeed to do (v1.4.1). >> >> >> But then I don't understand your original error because votca-csg >> >> >> 1.4.1 doesn't depend on Eigen3. >> >> > >> >> > >> >> > I guess I meant (implicitly) that I tried to follow the instructions >> >> > for >> >> > installation using cmake found on one of the VOTCA's webpages, and >> >> > that's >> >> > when I encountered the error message about eigen3 (not sure now what >> >> > version >> >> > it was, but I think 1.5.1). But then I went the spack way and was >> >> > satisfied. >> >> > Since then I have not tried cmake for any other version. But I may >> >> > try >> >> > on my >> >> > home PC soon. >> >> I see, it is a bit confusing in the README of the new buildsystem, >> >> hopefully that makes it more clear: >> >> >> >> >> >> https://github.com/votca/votca/commit/40cbeb2daf4b4647292cf423e9755125cb7c3380 >> >> >> >> Christoph >> >> > >> >> >> >> >> >> >> >> >> > >> >> >> > BTW, when I tried to install with apt-get nothing happened: no >> >> >> > votca >> >> >> > package >> >> >> > found. Perhaps it would only work for 2016(+) Ubuntu? >> >> >> Yes, only 2016.4 and later: >> >> >> >> >> >> >> >> >> >> >> >> https://packages.ubuntu.com/search?keywords=votca-csg=names=all=all >> >> >> and v1.4.1 only in Ubuntu 18.04! >> >> >> >> >> >> > >> >> >> >> >> >> >> >> > >> >> >> >> >> >> >> >> >> >> Not sure what went wrong, but I had to use alternative way of >> >> >> >> >> installation >> >> >> >> >> via spack, and it worked eventually, although it lloked like >> >> >> >> >>
Re: [votca] Missing, not found Eigen3 during VOTCA installation
On Thu, Jul 19, 2018 at 09:47 Christoph Junghans wrote: > On Thu, Jul 19, 2018 at 9:33 AM, 'Andrey Brukhno' via votca > wrote: > > > > > > On Thursday, July 19, 2018 at 3:27:52 PM UTC+1, Christoph Junghans wrote: > >> > >> On Wed, Jul 18, 2018 at 12:20 PM, Christoph Junghans > > >> wrote: > >> > On Wed, Jul 18, 2018 at 12:04 PM, 'Andrey Brukhno' via votca > >> > wrote: > >> >> Hello, > >> >> > >> >> The last time I was installing the CSG package in my Ubuntu > (up-to-date > >> >> 2014 > >> >> LTS) I got this error from cmake: eigen3 not found, with a suggestion > >> >> to > >> >> provide the path to it. I then downloaded the library from their > >> >> website, > >> >> installed it and added its include directory to both my $PATH and to > >> >> the > >> >> environment under the suggested name EIGEN3_INCLUDE_DIR. But cmake > >> >> still > >> >> complained and stopped with the same error, even when I fed it the > >> >> flag: > >> >> -DEIGEN3_INCLUDE_DIR=. > >> > Just a reminder that 2014 was already 4 years ago ;-) > > > > > > Thanks, up to now it did not hurt to stay with that version, but > eventually > > yes an upgrade is pending. :) > > > >> > >> > We recently fixed an issue in the Eigen3 detection: > >> > > >> > > https://github.com/votca/votca/commit/8fdcedae9b46e1739fa2ef8589cd5a8f6881d420 > >> > which includes: > >> > > >> > > https://github.com/votca/tools/commit/3ee8b88e6022772b843f21a04f66a5bd8bfddd09 > >> > > >> > > https://github.com/votca/csg/commit/c3f9b3e2841c4b5c0eac20e4d843f6b108750ecf > >> > Did you use that version? > > > > > > No, I have not tried any newer version yet. My aim was to get the latest > > release installed, which spack did succeed to do (v1.4.1). > But then I don't understand your original error because votca-csg > 1.4.1 doesn't depend on Eigen3. > > > > > BTW, when I tried to install with apt-get nothing happened: no votca > package > > found. Perhaps it would only work for 2016(+) Ubuntu? > Yes, only 2016.4 and later: > > https://packages.ubuntu.com/search?keywords=votca-csg=names=all=all > and v1.4.1 only in Ubuntu 18.04! > > > > >> > >> > > >> >> > >> >> Not sure what went wrong, but I had to use alternative way of > >> >> installation > >> >> via spack, and it worked eventually, although it lloked like spack > >> >> installed > >> >> ALL the dependencies along with VOTCA in a separate directory, which > is > >> >> of > >> >> course an overkill. > >> > That is Spack's design, so don't complain to me! And yes we need to > >> > update the dependencies of the VOTCA package in Spack. > >> https://github.com/spack/spack/pull/8757 > > > > > > I see... Otherwise I also noticed that spack installs csg and tools > > separately in two directories beside each other. But then VOTCARC.bash > etc > > occur in the tools/bin and VOTCASHARE points at votca_tools/share > instead of > > votca_csg/share, so the scripts/inverse are not found. I had to reset > > VOTCASHARE correctly in my .bashrc. > Good point I will have to think, how to fix that. I think the VOTCARC > file should get installed to start with as csg_inverse will > auto-detect the location (using csg_call in your PATH) if VOTCASHARE > isn't set. I dropped the install of the confusing VOTCARC in: > https://github.com/spack/spack/pull/8771 Christoph > > > Christoph > > > > > I mentioned this for other users to be aware. > > > > Andrey > >> > >> > >> >> > >> >> I suppose this post is just to notify the current developers that > there > >> >> might be some issue with finding an exiasting Eigen3 dir. > >> > Thanks for letting us know, can you try if above versions fix the > issue > >> > for you? > >> > > >> > Christoph > >> >> > >> >> Thanks > >> >> Andrey > >> >> > >> >> -- > >> >> You received this message because you are subscribed to the Google > >> >> Groups > >> >> "votca" group. > >> >> To unsubscribe from this group and stop receiving emails from it, > send > >> >> an > >> >> email to votca+un...@googlegroups.com. > >> >> To post to this group, send email to vo...@googlegroups.com. > >> >> Visit this group at https://groups.google.com/group/votca. > >> >> For more options, visit https://groups.google.com/d/optout. > >> > > >> > > >> > > >> > -- > >> > Christoph Junghans > >> > Web: http://www.compphys.de > >> > >> > >> > >> -- > >> Christoph Junghans > >> Web: http://www.compphys.de > > > > -- > > You received this message because you are subscribed to the Google Groups > > "votca" group. > > To unsubscribe from this group and stop receiving emails from it, send an > > email to votca+unsubscr...@googlegroups.com. > > To post to this group, send email to votca@googlegroups.com. > > Visit this group at https://groups.google.com/group/votca. > > For more options, visit https://groups.google.com/d/optout. > > > > -- > Christoph Junghans > Web: http://www.compphys.de > -- Christoph Junghans Web: http://www.compphys.de -- You received this message because you are subscribed to the Google Groups "votca" group. To
Re: [votca] Missing, not found Eigen3 during VOTCA installation
By now I have installed SQLITE3, compiled latest version of Gromacs and currently installing VOTCA. BTW, the Gromacs flag -DWITH_GMX=ON did not work for me either. Not sure what was the issue with the flag -DWITH_SQLITE3=OFF, but my cmake version was below 3, so I had to reinstall it too. Thanks Andrey On Sat, Jul 21, 2018 at 1:48 AM, Christoph Junghans wrote: > > > On Fri, Jul 20, 2018, 16:49 'Andrey Brukhno' via votca < > votca@googlegroups.com> wrote: > >> Well, I tried to follow your instructions in this thread for "stable" >> branch. >> > Just checked, worked for me. Can you open an github issue with all the > details (commands, output etc.) > > Thanks, > > Christoph > >> >> Andrey >> >> On Fri, 20 Jul 2018 22:41 Christoph Junghans, wrote: >> >>> On Fri, Jul 20, 2018 at 3:11 PM, 'Andrey Brukhno' via votca >>> wrote: >>> > The problem is, I remembered this option for the old build script and >>> tried >>> > to use it with cmake but still got the error "sqlite3 not found". >>> Which version of VOTCA are you using now? >>> >>> > >>> > Andrey >>> > >>> > On Fri, 20 Jul 2018 21:56 Christoph Junghans, >>> wrote: >>> >> >>> >> On Fri, Jul 20, 2018 at 11:08 AM, 'Andrey Brukhno' via votca >>> >> wrote: >>> >> > Christoph, >>> >> > >>> >> > What is the flag for cmake not to search for SQLITE3? >>> >> WITH_SQLITE3=OFF, btw you can just look up the options in ccmake. >>> >> >>> >> Christoph >>> >> > >>> >> > Thanks >>> >> > Andrey >>> >> > >>> >> > >>> >> > On Thu, Jul 19, 2018 at 8:18 PM, Christoph Junghans < >>> jungh...@votca.org> >>> >> > wrote: >>> >> >> >>> >> >> On Thu, Jul 19, 2018 at 10:57 AM, 'Andrey Brukhno' via votca >>> >> >> wrote: >>> >> >> > >>> >> >> > >>> >> >> > On Thursday, July 19, 2018 at 4:48:14 PM UTC+1, Christoph >>> Junghans >>> >> >> > wrote: >>> >> >> >> >>> >> >> >> >> >>> >> >> >> >> > We recently fixed an issue in the Eigen3 detection: >>> >> >> >> >> > >>> >> >> >> >> > >>> >> >> >> >> > >>> >> >> >> >> > >>> >> >> >> >> > https://github.com/votca/votca >>> /commit/8fdcedae9b46e1739fa2ef8589cd5a8f6881d420 >>> >> >> >> >> > which includes: >>> >> >> >> >> > >>> >> >> >> >> > >>> >> >> >> >> > >>> >> >> >> >> > >>> >> >> >> >> > https://github.com/votca/tools >>> /commit/3ee8b88e6022772b843f21a04f66a5bd8bfddd09 >>> >> >> >> >> > >>> >> >> >> >> > >>> >> >> >> >> > >>> >> >> >> >> > >>> >> >> >> >> > https://github.com/votca/csg/c >>> ommit/c3f9b3e2841c4b5c0eac20e4d843f6b108750ecf >>> >> >> >> >> > Did you use that version? >>> >> >> >> > >>> >> >> >> > >>> >> >> >> > No, I have not tried any newer version yet. My aim was to get >>> the >>> >> >> >> > latest >>> >> >> >> > release installed, which spack did succeed to do (v1.4.1). >>> >> >> >> But then I don't understand your original error because >>> votca-csg >>> >> >> >> 1.4.1 doesn't depend on Eigen3. >>> >> >> > >>> >> >> > >>> >> >> > I guess I meant (implicitly) that I tried to follow the >>> instructions >>> >> >> > for >>> >> >> > installation using cmake found on one of the VOTCA's webpages, >>> and >>> >> >> > that's >>> >> >> > when I encountered the error message about eigen3 (not sure now >>> what >>> >> >> > version >>> >> >> > it was, but I think 1.5.1). But then I went the spack way and was >>> >> >> > satisfied. >>> >> >> > Since then I have not tried cmake for any other version. But I >>> may >>> >> >> > try >>> >> >> > on my >>> >> >> > home PC soon. >>> >> >> I see, it is a bit confusing in the README of the new buildsystem, >>> >> >> hopefully that makes it more clear: >>> >> >> >>> >> >> >>> >> >> https://github.com/votca/votca/commit/40cbeb2daf4b4647292cf4 >>> 23e9755125cb7c3380 >>> >> >> >>> >> >> Christoph >>> >> >> > >>> >> >> >> >>> >> >> >> >>> >> >> >> > >>> >> >> >> > BTW, when I tried to install with apt-get nothing happened: no >>> >> >> >> > votca >>> >> >> >> > package >>> >> >> >> > found. Perhaps it would only work for 2016(+) Ubuntu? >>> >> >> >> Yes, only 2016.4 and later: >>> >> >> >> >>> >> >> >> >>> >> >> >> >>> >> >> >> https://packages.ubuntu.com/search?keywords=votca-csg >>> on=names=all=all >>> >> >> >> and v1.4.1 only in Ubuntu 18.04! >>> >> >> >> >>> >> >> >> > >>> >> >> >> >> >>> >> >> >> >> > >>> >> >> >> >> >> >>> >> >> >> >> >> Not sure what went wrong, but I had to use alternative >>> way of >>> >> >> >> >> >> installation >>> >> >> >> >> >> via spack, and it worked eventually, although it lloked >>> like >>> >> >> >> >> >> spack >>> >> >> >> >> >> installed >>> >> >> >> >> >> ALL the dependencies along with VOTCA in a separate >>> directory, >>> >> >> >> >> >> which >>> >> >> >> >> >> is >>> >> >> >> >> >> of >>> >> >> >> >> >> course an overkill. >>> >> >> >> >> > That is Spack's design, so don't complain to me! And yes we >>> >> >> >> >> > need >>> >> >> >> >> > to >>> >> >> >> >> > update the dependencies of the VOTCA package in Spack. >>> >> >> >> >> https://github.com/spack/spack/pull/8757 >>> >> >> >> > >>> >> >> >> > >>> >> >> >> > I see... Otherwise I also
Re: [votca] Missing, not found Eigen3 during VOTCA installation
On Fri, Jul 20, 2018, 16:49 'Andrey Brukhno' via votca < votca@googlegroups.com> wrote: > Well, I tried to follow your instructions in this thread for "stable" > branch. > Just checked, worked for me. Can you open an github issue with all the details (commands, output etc.) Thanks, Christoph > > Andrey > > On Fri, 20 Jul 2018 22:41 Christoph Junghans, wrote: > >> On Fri, Jul 20, 2018 at 3:11 PM, 'Andrey Brukhno' via votca >> wrote: >> > The problem is, I remembered this option for the old build script and >> tried >> > to use it with cmake but still got the error "sqlite3 not found". >> Which version of VOTCA are you using now? >> >> > >> > Andrey >> > >> > On Fri, 20 Jul 2018 21:56 Christoph Junghans, >> wrote: >> >> >> >> On Fri, Jul 20, 2018 at 11:08 AM, 'Andrey Brukhno' via votca >> >> wrote: >> >> > Christoph, >> >> > >> >> > What is the flag for cmake not to search for SQLITE3? >> >> WITH_SQLITE3=OFF, btw you can just look up the options in ccmake. >> >> >> >> Christoph >> >> > >> >> > Thanks >> >> > Andrey >> >> > >> >> > >> >> > On Thu, Jul 19, 2018 at 8:18 PM, Christoph Junghans < >> jungh...@votca.org> >> >> > wrote: >> >> >> >> >> >> On Thu, Jul 19, 2018 at 10:57 AM, 'Andrey Brukhno' via votca >> >> >> wrote: >> >> >> > >> >> >> > >> >> >> > On Thursday, July 19, 2018 at 4:48:14 PM UTC+1, Christoph Junghans >> >> >> > wrote: >> >> >> >> >> >> >> >> >> >> >> >> >> >> > We recently fixed an issue in the Eigen3 detection: >> >> >> >> >> > >> >> >> >> >> > >> >> >> >> >> > >> >> >> >> >> > >> >> >> >> >> > https://github.com/votca/votca/commit/ >> 8fdcedae9b46e1739fa2ef8589cd5a8f6881d420 >> >> >> >> >> > which includes: >> >> >> >> >> > >> >> >> >> >> > >> >> >> >> >> > >> >> >> >> >> > >> >> >> >> >> > https://github.com/votca/tools/commit/ >> 3ee8b88e6022772b843f21a04f66a5bd8bfddd09 >> >> >> >> >> > >> >> >> >> >> > >> >> >> >> >> > >> >> >> >> >> > >> >> >> >> >> > https://github.com/votca/csg/commit/ >> c3f9b3e2841c4b5c0eac20e4d843f6b108750ecf >> >> >> >> >> > Did you use that version? >> >> >> >> > >> >> >> >> > >> >> >> >> > No, I have not tried any newer version yet. My aim was to get >> the >> >> >> >> > latest >> >> >> >> > release installed, which spack did succeed to do (v1.4.1). >> >> >> >> But then I don't understand your original error because votca-csg >> >> >> >> 1.4.1 doesn't depend on Eigen3. >> >> >> > >> >> >> > >> >> >> > I guess I meant (implicitly) that I tried to follow the >> instructions >> >> >> > for >> >> >> > installation using cmake found on one of the VOTCA's webpages, and >> >> >> > that's >> >> >> > when I encountered the error message about eigen3 (not sure now >> what >> >> >> > version >> >> >> > it was, but I think 1.5.1). But then I went the spack way and was >> >> >> > satisfied. >> >> >> > Since then I have not tried cmake for any other version. But I may >> >> >> > try >> >> >> > on my >> >> >> > home PC soon. >> >> >> I see, it is a bit confusing in the README of the new buildsystem, >> >> >> hopefully that makes it more clear: >> >> >> >> >> >> >> >> >> https://github.com/votca/votca/commit/ >> 40cbeb2daf4b4647292cf423e9755125cb7c3380 >> >> >> >> >> >> Christoph >> >> >> > >> >> >> >> >> >> >> >> >> >> >> >> > >> >> >> >> > BTW, when I tried to install with apt-get nothing happened: no >> >> >> >> > votca >> >> >> >> > package >> >> >> >> > found. Perhaps it would only work for 2016(+) Ubuntu? >> >> >> >> Yes, only 2016.4 and later: >> >> >> >> >> >> >> >> >> >> >> >> >> >> >> >> https://packages.ubuntu.com/search?keywords=votca-csg; >> searchon=names=all=all >> >> >> >> and v1.4.1 only in Ubuntu 18.04! >> >> >> >> >> >> >> >> > >> >> >> >> >> >> >> >> >> >> > >> >> >> >> >> >> >> >> >> >> >> >> Not sure what went wrong, but I had to use alternative way >> of >> >> >> >> >> >> installation >> >> >> >> >> >> via spack, and it worked eventually, although it lloked >> like >> >> >> >> >> >> spack >> >> >> >> >> >> installed >> >> >> >> >> >> ALL the dependencies along with VOTCA in a separate >> directory, >> >> >> >> >> >> which >> >> >> >> >> >> is >> >> >> >> >> >> of >> >> >> >> >> >> course an overkill. >> >> >> >> >> > That is Spack's design, so don't complain to me! And yes we >> >> >> >> >> > need >> >> >> >> >> > to >> >> >> >> >> > update the dependencies of the VOTCA package in Spack. >> >> >> >> >> https://github.com/spack/spack/pull/8757 >> >> >> >> > >> >> >> >> > >> >> >> >> > I see... Otherwise I also noticed that spack installs csg and >> >> >> >> > tools >> >> >> >> > separately in two directories beside each other. But then >> >> >> >> > VOTCARC.bash >> >> >> >> > etc >> >> >> >> > occur in the tools/bin and VOTCASHARE points at >> votca_tools/share >> >> >> >> > instead of >> >> >> >> > votca_csg/share, so the scripts/inverse are not found. I had to >> >> >> >> > reset >> >> >> >> > VOTCASHARE correctly in my .bashrc. >> >> >> >> Good point I will have to think, how to fix that. I think the >> >> >> >> VOTCARC >> >> >> >> file
Re: [votca] Missing, not found Eigen3 during VOTCA installation
Well, I tried to follow your instructions in this thread for "stable" branch. Andrey On Fri, 20 Jul 2018 22:41 Christoph Junghans, wrote: > On Fri, Jul 20, 2018 at 3:11 PM, 'Andrey Brukhno' via votca > wrote: > > The problem is, I remembered this option for the old build script and > tried > > to use it with cmake but still got the error "sqlite3 not found". > Which version of VOTCA are you using now? > > > > > Andrey > > > > On Fri, 20 Jul 2018 21:56 Christoph Junghans, > wrote: > >> > >> On Fri, Jul 20, 2018 at 11:08 AM, 'Andrey Brukhno' via votca > >> wrote: > >> > Christoph, > >> > > >> > What is the flag for cmake not to search for SQLITE3? > >> WITH_SQLITE3=OFF, btw you can just look up the options in ccmake. > >> > >> Christoph > >> > > >> > Thanks > >> > Andrey > >> > > >> > > >> > On Thu, Jul 19, 2018 at 8:18 PM, Christoph Junghans < > jungh...@votca.org> > >> > wrote: > >> >> > >> >> On Thu, Jul 19, 2018 at 10:57 AM, 'Andrey Brukhno' via votca > >> >> wrote: > >> >> > > >> >> > > >> >> > On Thursday, July 19, 2018 at 4:48:14 PM UTC+1, Christoph Junghans > >> >> > wrote: > >> >> >> > >> >> >> >> > >> >> >> >> > We recently fixed an issue in the Eigen3 detection: > >> >> >> >> > > >> >> >> >> > > >> >> >> >> > > >> >> >> >> > > >> >> >> >> > > https://github.com/votca/votca/commit/8fdcedae9b46e1739fa2ef8589cd5a8f6881d420 > >> >> >> >> > which includes: > >> >> >> >> > > >> >> >> >> > > >> >> >> >> > > >> >> >> >> > > >> >> >> >> > > https://github.com/votca/tools/commit/3ee8b88e6022772b843f21a04f66a5bd8bfddd09 > >> >> >> >> > > >> >> >> >> > > >> >> >> >> > > >> >> >> >> > > >> >> >> >> > > https://github.com/votca/csg/commit/c3f9b3e2841c4b5c0eac20e4d843f6b108750ecf > >> >> >> >> > Did you use that version? > >> >> >> > > >> >> >> > > >> >> >> > No, I have not tried any newer version yet. My aim was to get > the > >> >> >> > latest > >> >> >> > release installed, which spack did succeed to do (v1.4.1). > >> >> >> But then I don't understand your original error because votca-csg > >> >> >> 1.4.1 doesn't depend on Eigen3. > >> >> > > >> >> > > >> >> > I guess I meant (implicitly) that I tried to follow the > instructions > >> >> > for > >> >> > installation using cmake found on one of the VOTCA's webpages, and > >> >> > that's > >> >> > when I encountered the error message about eigen3 (not sure now > what > >> >> > version > >> >> > it was, but I think 1.5.1). But then I went the spack way and was > >> >> > satisfied. > >> >> > Since then I have not tried cmake for any other version. But I may > >> >> > try > >> >> > on my > >> >> > home PC soon. > >> >> I see, it is a bit confusing in the README of the new buildsystem, > >> >> hopefully that makes it more clear: > >> >> > >> >> > >> >> > https://github.com/votca/votca/commit/40cbeb2daf4b4647292cf423e9755125cb7c3380 > >> >> > >> >> Christoph > >> >> > > >> >> >> > >> >> >> > >> >> >> > > >> >> >> > BTW, when I tried to install with apt-get nothing happened: no > >> >> >> > votca > >> >> >> > package > >> >> >> > found. Perhaps it would only work for 2016(+) Ubuntu? > >> >> >> Yes, only 2016.4 and later: > >> >> >> > >> >> >> > >> >> >> > >> >> >> > https://packages.ubuntu.com/search?keywords=votca-csg=names=all=all > >> >> >> and v1.4.1 only in Ubuntu 18.04! > >> >> >> > >> >> >> > > >> >> >> >> > >> >> >> >> > > >> >> >> >> >> > >> >> >> >> >> Not sure what went wrong, but I had to use alternative way > of > >> >> >> >> >> installation > >> >> >> >> >> via spack, and it worked eventually, although it lloked like > >> >> >> >> >> spack > >> >> >> >> >> installed > >> >> >> >> >> ALL the dependencies along with VOTCA in a separate > directory, > >> >> >> >> >> which > >> >> >> >> >> is > >> >> >> >> >> of > >> >> >> >> >> course an overkill. > >> >> >> >> > That is Spack's design, so don't complain to me! And yes we > >> >> >> >> > need > >> >> >> >> > to > >> >> >> >> > update the dependencies of the VOTCA package in Spack. > >> >> >> >> https://github.com/spack/spack/pull/8757 > >> >> >> > > >> >> >> > > >> >> >> > I see... Otherwise I also noticed that spack installs csg and > >> >> >> > tools > >> >> >> > separately in two directories beside each other. But then > >> >> >> > VOTCARC.bash > >> >> >> > etc > >> >> >> > occur in the tools/bin and VOTCASHARE points at > votca_tools/share > >> >> >> > instead of > >> >> >> > votca_csg/share, so the scripts/inverse are not found. I had to > >> >> >> > reset > >> >> >> > VOTCASHARE correctly in my .bashrc. > >> >> >> Good point I will have to think, how to fix that. I think the > >> >> >> VOTCARC > >> >> >> file should get installed to start with as csg_inverse will > >> >> >> auto-detect the location (using csg_call in your PATH) if > VOTCASHARE > >> >> >> isn't set. > >> >> >> > >> >> >> Christoph > >> >> >> > >> >> >> > > >> >> >> > I mentioned this for other users to be aware. > >> >> >> > > >> >> >> > Andrey > >> >> >> >> > >> >> >> >> > >> >> >> >> >> > >> >> >> >> >> I suppose this post
Re: [votca] Missing, not found Eigen3 during VOTCA installation
On Fri, Jul 20, 2018 at 3:11 PM, 'Andrey Brukhno' via votca wrote: > The problem is, I remembered this option for the old build script and tried > to use it with cmake but still got the error "sqlite3 not found". Which version of VOTCA are you using now? > > Andrey > > On Fri, 20 Jul 2018 21:56 Christoph Junghans, wrote: >> >> On Fri, Jul 20, 2018 at 11:08 AM, 'Andrey Brukhno' via votca >> wrote: >> > Christoph, >> > >> > What is the flag for cmake not to search for SQLITE3? >> WITH_SQLITE3=OFF, btw you can just look up the options in ccmake. >> >> Christoph >> > >> > Thanks >> > Andrey >> > >> > >> > On Thu, Jul 19, 2018 at 8:18 PM, Christoph Junghans >> > wrote: >> >> >> >> On Thu, Jul 19, 2018 at 10:57 AM, 'Andrey Brukhno' via votca >> >> wrote: >> >> > >> >> > >> >> > On Thursday, July 19, 2018 at 4:48:14 PM UTC+1, Christoph Junghans >> >> > wrote: >> >> >> >> >> >> >> >> >> >> >> > We recently fixed an issue in the Eigen3 detection: >> >> >> >> > >> >> >> >> > >> >> >> >> > >> >> >> >> > >> >> >> >> > https://github.com/votca/votca/commit/8fdcedae9b46e1739fa2ef8589cd5a8f6881d420 >> >> >> >> > which includes: >> >> >> >> > >> >> >> >> > >> >> >> >> > >> >> >> >> > >> >> >> >> > https://github.com/votca/tools/commit/3ee8b88e6022772b843f21a04f66a5bd8bfddd09 >> >> >> >> > >> >> >> >> > >> >> >> >> > >> >> >> >> > >> >> >> >> > https://github.com/votca/csg/commit/c3f9b3e2841c4b5c0eac20e4d843f6b108750ecf >> >> >> >> > Did you use that version? >> >> >> > >> >> >> > >> >> >> > No, I have not tried any newer version yet. My aim was to get the >> >> >> > latest >> >> >> > release installed, which spack did succeed to do (v1.4.1). >> >> >> But then I don't understand your original error because votca-csg >> >> >> 1.4.1 doesn't depend on Eigen3. >> >> > >> >> > >> >> > I guess I meant (implicitly) that I tried to follow the instructions >> >> > for >> >> > installation using cmake found on one of the VOTCA's webpages, and >> >> > that's >> >> > when I encountered the error message about eigen3 (not sure now what >> >> > version >> >> > it was, but I think 1.5.1). But then I went the spack way and was >> >> > satisfied. >> >> > Since then I have not tried cmake for any other version. But I may >> >> > try >> >> > on my >> >> > home PC soon. >> >> I see, it is a bit confusing in the README of the new buildsystem, >> >> hopefully that makes it more clear: >> >> >> >> >> >> https://github.com/votca/votca/commit/40cbeb2daf4b4647292cf423e9755125cb7c3380 >> >> >> >> Christoph >> >> > >> >> >> >> >> >> >> >> >> > >> >> >> > BTW, when I tried to install with apt-get nothing happened: no >> >> >> > votca >> >> >> > package >> >> >> > found. Perhaps it would only work for 2016(+) Ubuntu? >> >> >> Yes, only 2016.4 and later: >> >> >> >> >> >> >> >> >> >> >> >> https://packages.ubuntu.com/search?keywords=votca-csg=names=all=all >> >> >> and v1.4.1 only in Ubuntu 18.04! >> >> >> >> >> >> > >> >> >> >> >> >> >> >> > >> >> >> >> >> >> >> >> >> >> Not sure what went wrong, but I had to use alternative way of >> >> >> >> >> installation >> >> >> >> >> via spack, and it worked eventually, although it lloked like >> >> >> >> >> spack >> >> >> >> >> installed >> >> >> >> >> ALL the dependencies along with VOTCA in a separate directory, >> >> >> >> >> which >> >> >> >> >> is >> >> >> >> >> of >> >> >> >> >> course an overkill. >> >> >> >> > That is Spack's design, so don't complain to me! And yes we >> >> >> >> > need >> >> >> >> > to >> >> >> >> > update the dependencies of the VOTCA package in Spack. >> >> >> >> https://github.com/spack/spack/pull/8757 >> >> >> > >> >> >> > >> >> >> > I see... Otherwise I also noticed that spack installs csg and >> >> >> > tools >> >> >> > separately in two directories beside each other. But then >> >> >> > VOTCARC.bash >> >> >> > etc >> >> >> > occur in the tools/bin and VOTCASHARE points at votca_tools/share >> >> >> > instead of >> >> >> > votca_csg/share, so the scripts/inverse are not found. I had to >> >> >> > reset >> >> >> > VOTCASHARE correctly in my .bashrc. >> >> >> Good point I will have to think, how to fix that. I think the >> >> >> VOTCARC >> >> >> file should get installed to start with as csg_inverse will >> >> >> auto-detect the location (using csg_call in your PATH) if VOTCASHARE >> >> >> isn't set. >> >> >> >> >> >> Christoph >> >> >> >> >> >> > >> >> >> > I mentioned this for other users to be aware. >> >> >> > >> >> >> > Andrey >> >> >> >> >> >> >> >> >> >> >> >> >> >> >> >> >> >> I suppose this post is just to notify the current developers >> >> >> >> >> that >> >> >> >> >> there >> >> >> >> >> might be some issue with finding an exiasting Eigen3 dir. >> >> >> >> > Thanks for letting us know, can you try if above versions fix >> >> >> >> > the >> >> >> >> > issue >> >> >> >> > for you? >> >> >> >> > >> >> >> >> > Christoph >> >> >> >> >> >> >> >> >> >> Thanks >> >> >> >> >> Andrey >> >> >> >> >> >> >> >> >> >> -- >> >> >> >> >> You received this message because you are
Re: [votca] Missing, not found Eigen3 during VOTCA installation
On Fri, Jul 20, 2018 at 11:08 AM, 'Andrey Brukhno' via votca wrote: > Christoph, > > What is the flag for cmake not to search for SQLITE3? WITH_SQLITE3=OFF, btw you can just look up the options in ccmake. Christoph > > Thanks > Andrey > > > On Thu, Jul 19, 2018 at 8:18 PM, Christoph Junghans > wrote: >> >> On Thu, Jul 19, 2018 at 10:57 AM, 'Andrey Brukhno' via votca >> wrote: >> > >> > >> > On Thursday, July 19, 2018 at 4:48:14 PM UTC+1, Christoph Junghans >> > wrote: >> >> >> >> >> >> >> >> > We recently fixed an issue in the Eigen3 detection: >> >> >> > >> >> >> > >> >> >> > >> >> >> > https://github.com/votca/votca/commit/8fdcedae9b46e1739fa2ef8589cd5a8f6881d420 >> >> >> > which includes: >> >> >> > >> >> >> > >> >> >> > >> >> >> > https://github.com/votca/tools/commit/3ee8b88e6022772b843f21a04f66a5bd8bfddd09 >> >> >> > >> >> >> > >> >> >> > >> >> >> > https://github.com/votca/csg/commit/c3f9b3e2841c4b5c0eac20e4d843f6b108750ecf >> >> >> > Did you use that version? >> >> > >> >> > >> >> > No, I have not tried any newer version yet. My aim was to get the >> >> > latest >> >> > release installed, which spack did succeed to do (v1.4.1). >> >> But then I don't understand your original error because votca-csg >> >> 1.4.1 doesn't depend on Eigen3. >> > >> > >> > I guess I meant (implicitly) that I tried to follow the instructions for >> > installation using cmake found on one of the VOTCA's webpages, and >> > that's >> > when I encountered the error message about eigen3 (not sure now what >> > version >> > it was, but I think 1.5.1). But then I went the spack way and was >> > satisfied. >> > Since then I have not tried cmake for any other version. But I may try >> > on my >> > home PC soon. >> I see, it is a bit confusing in the README of the new buildsystem, >> hopefully that makes it more clear: >> >> https://github.com/votca/votca/commit/40cbeb2daf4b4647292cf423e9755125cb7c3380 >> >> Christoph >> > >> >> >> >> >> >> > >> >> > BTW, when I tried to install with apt-get nothing happened: no votca >> >> > package >> >> > found. Perhaps it would only work for 2016(+) Ubuntu? >> >> Yes, only 2016.4 and later: >> >> >> >> >> >> https://packages.ubuntu.com/search?keywords=votca-csg=names=all=all >> >> and v1.4.1 only in Ubuntu 18.04! >> >> >> >> > >> >> >> >> >> >> > >> >> >> >> >> >> >> >> Not sure what went wrong, but I had to use alternative way of >> >> >> >> installation >> >> >> >> via spack, and it worked eventually, although it lloked like >> >> >> >> spack >> >> >> >> installed >> >> >> >> ALL the dependencies along with VOTCA in a separate directory, >> >> >> >> which >> >> >> >> is >> >> >> >> of >> >> >> >> course an overkill. >> >> >> > That is Spack's design, so don't complain to me! And yes we need >> >> >> > to >> >> >> > update the dependencies of the VOTCA package in Spack. >> >> >> https://github.com/spack/spack/pull/8757 >> >> > >> >> > >> >> > I see... Otherwise I also noticed that spack installs csg and tools >> >> > separately in two directories beside each other. But then >> >> > VOTCARC.bash >> >> > etc >> >> > occur in the tools/bin and VOTCASHARE points at votca_tools/share >> >> > instead of >> >> > votca_csg/share, so the scripts/inverse are not found. I had to reset >> >> > VOTCASHARE correctly in my .bashrc. >> >> Good point I will have to think, how to fix that. I think the VOTCARC >> >> file should get installed to start with as csg_inverse will >> >> auto-detect the location (using csg_call in your PATH) if VOTCASHARE >> >> isn't set. >> >> >> >> Christoph >> >> >> >> > >> >> > I mentioned this for other users to be aware. >> >> > >> >> > Andrey >> >> >> >> >> >> >> >> >> >> >> >> >> >> I suppose this post is just to notify the current developers that >> >> >> >> there >> >> >> >> might be some issue with finding an exiasting Eigen3 dir. >> >> >> > Thanks for letting us know, can you try if above versions fix the >> >> >> > issue >> >> >> > for you? >> >> >> > >> >> >> > Christoph >> >> >> >> >> >> >> >> Thanks >> >> >> >> Andrey >> >> >> >> >> >> >> >> -- >> >> >> >> You received this message because you are subscribed to the >> >> >> >> Google >> >> >> >> Groups >> >> >> >> "votca" group. >> >> >> >> To unsubscribe from this group and stop receiving emails from it, >> >> >> >> send >> >> >> >> an >> >> >> >> email to votca+un...@googlegroups.com. >> >> >> >> To post to this group, send email to vo...@googlegroups.com. >> >> >> >> Visit this group at https://groups.google.com/group/votca. >> >> >> >> For more options, visit https://groups.google.com/d/optout. >> >> >> > >> >> >> > >> >> >> > >> >> >> > -- >> >> >> > Christoph Junghans >> >> >> > Web: http://www.compphys.de >> >> >> >> >> >> >> >> >> >> >> >> -- >> >> >> Christoph Junghans >> >> >> Web: http://www.compphys.de >> >> > >> >> > -- >> >> > You received this message because you are subscribed to the Google >> >> > Groups >> >> > "votca" group. >> >> > To unsubscribe from this group and stop receiving emails from
Re: [votca] Missing, not found Eigen3 during VOTCA installation
Ok, I will give it a try on my home PC. Andrey On Thursday, July 19, 2018 at 8:19:03 PM UTC+1, Christoph Junghans wrote: > > On Thu, Jul 19, 2018 at 10:57 AM, 'Andrey Brukhno' via votca > > wrote: > > > > > > On Thursday, July 19, 2018 at 4:48:14 PM UTC+1, Christoph Junghans > wrote: > >> > >> >> > >> >> > We recently fixed an issue in the Eigen3 detection: > >> >> > > >> >> > > >> >> > > https://github.com/votca/votca/commit/8fdcedae9b46e1739fa2ef8589cd5a8f6881d420 > > >> >> > which includes: > >> >> > > >> >> > > >> >> > > https://github.com/votca/tools/commit/3ee8b88e6022772b843f21a04f66a5bd8bfddd09 > > >> >> > > >> >> > > >> >> > > https://github.com/votca/csg/commit/c3f9b3e2841c4b5c0eac20e4d843f6b108750ecf > >> >> > Did you use that version? > >> > > >> > > >> > No, I have not tried any newer version yet. My aim was to get the > latest > >> > release installed, which spack did succeed to do (v1.4.1). > >> But then I don't understand your original error because votca-csg > >> 1.4.1 doesn't depend on Eigen3. > > > > > > I guess I meant (implicitly) that I tried to follow the instructions for > > installation using cmake found on one of the VOTCA's webpages, and > that's > > when I encountered the error message about eigen3 (not sure now what > version > > it was, but I think 1.5.1). But then I went the spack way and was > satisfied. > > Since then I have not tried cmake for any other version. But I may try > on my > > home PC soon. > I see, it is a bit confusing in the README of the new buildsystem, > hopefully that makes it more clear: > > https://github.com/votca/votca/commit/40cbeb2daf4b4647292cf423e9755125cb7c3380 > > > Christoph > > > >> > >> > >> > > >> > BTW, when I tried to install with apt-get nothing happened: no votca > >> > package > >> > found. Perhaps it would only work for 2016(+) Ubuntu? > >> Yes, only 2016.4 and later: > >> > >> > https://packages.ubuntu.com/search?keywords=votca-csg=names=all=all > > >> and v1.4.1 only in Ubuntu 18.04! > >> > >> > > >> >> > >> >> > > >> >> >> > >> >> >> Not sure what went wrong, but I had to use alternative way of > >> >> >> installation > >> >> >> via spack, and it worked eventually, although it lloked like > spack > >> >> >> installed > >> >> >> ALL the dependencies along with VOTCA in a separate directory, > which > >> >> >> is > >> >> >> of > >> >> >> course an overkill. > >> >> > That is Spack's design, so don't complain to me! And yes we need > to > >> >> > update the dependencies of the VOTCA package in Spack. > >> >> https://github.com/spack/spack/pull/8757 > >> > > >> > > >> > I see... Otherwise I also noticed that spack installs csg and tools > >> > separately in two directories beside each other. But then > VOTCARC.bash > >> > etc > >> > occur in the tools/bin and VOTCASHARE points at votca_tools/share > >> > instead of > >> > votca_csg/share, so the scripts/inverse are not found. I had to reset > >> > VOTCASHARE correctly in my .bashrc. > >> Good point I will have to think, how to fix that. I think the VOTCARC > >> file should get installed to start with as csg_inverse will > >> auto-detect the location (using csg_call in your PATH) if VOTCASHARE > >> isn't set. > >> > >> Christoph > >> > >> > > >> > I mentioned this for other users to be aware. > >> > > >> > Andrey > >> >> > >> >> > >> >> >> > >> >> >> I suppose this post is just to notify the current developers that > >> >> >> there > >> >> >> might be some issue with finding an exiasting Eigen3 dir. > >> >> > Thanks for letting us know, can you try if above versions fix the > >> >> > issue > >> >> > for you? > >> >> > > >> >> > Christoph > >> >> >> > >> >> >> Thanks > >> >> >> Andrey > >> >> >> > >> >> >> -- > >> >> >> You received this message because you are subscribed to the > Google > >> >> >> Groups > >> >> >> "votca" group. > >> >> >> To unsubscribe from this group and stop receiving emails from it, > >> >> >> send > >> >> >> an > >> >> >> email to votca+un...@googlegroups.com. > >> >> >> To post to this group, send email to vo...@googlegroups.com. > >> >> >> Visit this group at https://groups.google.com/group/votca. > >> >> >> For more options, visit https://groups.google.com/d/optout. > >> >> > > >> >> > > >> >> > > >> >> > -- > >> >> > Christoph Junghans > >> >> > Web: http://www.compphys.de > >> >> > >> >> > >> >> > >> >> -- > >> >> Christoph Junghans > >> >> Web: http://www.compphys.de > >> > > >> > -- > >> > You received this message because you are subscribed to the Google > >> > Groups > >> > "votca" group. > >> > To unsubscribe from this group and stop receiving emails from it, > send > >> > an > >> > email to votca+un...@googlegroups.com. > >> > To post to this group, send email to vo...@googlegroups.com. > >> > Visit this group at https://groups.google.com/group/votca. > >> > For more options, visit
Re: [votca] Missing, not found Eigen3 during VOTCA installation
On Thu, Jul 19, 2018 at 10:57 AM, 'Andrey Brukhno' via votca wrote: > > > On Thursday, July 19, 2018 at 4:48:14 PM UTC+1, Christoph Junghans wrote: >> >> >> >> >> > We recently fixed an issue in the Eigen3 detection: >> >> > >> >> > >> >> > https://github.com/votca/votca/commit/8fdcedae9b46e1739fa2ef8589cd5a8f6881d420 >> >> > which includes: >> >> > >> >> > >> >> > https://github.com/votca/tools/commit/3ee8b88e6022772b843f21a04f66a5bd8bfddd09 >> >> > >> >> > >> >> > https://github.com/votca/csg/commit/c3f9b3e2841c4b5c0eac20e4d843f6b108750ecf >> >> > Did you use that version? >> > >> > >> > No, I have not tried any newer version yet. My aim was to get the latest >> > release installed, which spack did succeed to do (v1.4.1). >> But then I don't understand your original error because votca-csg >> 1.4.1 doesn't depend on Eigen3. > > > I guess I meant (implicitly) that I tried to follow the instructions for > installation using cmake found on one of the VOTCA's webpages, and that's > when I encountered the error message about eigen3 (not sure now what version > it was, but I think 1.5.1). But then I went the spack way and was satisfied. > Since then I have not tried cmake for any other version. But I may try on my > home PC soon. I see, it is a bit confusing in the README of the new buildsystem, hopefully that makes it more clear: https://github.com/votca/votca/commit/40cbeb2daf4b4647292cf423e9755125cb7c3380 Christoph > >> >> >> > >> > BTW, when I tried to install with apt-get nothing happened: no votca >> > package >> > found. Perhaps it would only work for 2016(+) Ubuntu? >> Yes, only 2016.4 and later: >> >> https://packages.ubuntu.com/search?keywords=votca-csg=names=all=all >> and v1.4.1 only in Ubuntu 18.04! >> >> > >> >> >> >> > >> >> >> >> >> >> Not sure what went wrong, but I had to use alternative way of >> >> >> installation >> >> >> via spack, and it worked eventually, although it lloked like spack >> >> >> installed >> >> >> ALL the dependencies along with VOTCA in a separate directory, which >> >> >> is >> >> >> of >> >> >> course an overkill. >> >> > That is Spack's design, so don't complain to me! And yes we need to >> >> > update the dependencies of the VOTCA package in Spack. >> >> https://github.com/spack/spack/pull/8757 >> > >> > >> > I see... Otherwise I also noticed that spack installs csg and tools >> > separately in two directories beside each other. But then VOTCARC.bash >> > etc >> > occur in the tools/bin and VOTCASHARE points at votca_tools/share >> > instead of >> > votca_csg/share, so the scripts/inverse are not found. I had to reset >> > VOTCASHARE correctly in my .bashrc. >> Good point I will have to think, how to fix that. I think the VOTCARC >> file should get installed to start with as csg_inverse will >> auto-detect the location (using csg_call in your PATH) if VOTCASHARE >> isn't set. >> >> Christoph >> >> > >> > I mentioned this for other users to be aware. >> > >> > Andrey >> >> >> >> >> >> >> >> >> >> I suppose this post is just to notify the current developers that >> >> >> there >> >> >> might be some issue with finding an exiasting Eigen3 dir. >> >> > Thanks for letting us know, can you try if above versions fix the >> >> > issue >> >> > for you? >> >> > >> >> > Christoph >> >> >> >> >> >> Thanks >> >> >> Andrey >> >> >> >> >> >> -- >> >> >> You received this message because you are subscribed to the Google >> >> >> Groups >> >> >> "votca" group. >> >> >> To unsubscribe from this group and stop receiving emails from it, >> >> >> send >> >> >> an >> >> >> email to votca+un...@googlegroups.com. >> >> >> To post to this group, send email to vo...@googlegroups.com. >> >> >> Visit this group at https://groups.google.com/group/votca. >> >> >> For more options, visit https://groups.google.com/d/optout. >> >> > >> >> > >> >> > >> >> > -- >> >> > Christoph Junghans >> >> > Web: http://www.compphys.de >> >> >> >> >> >> >> >> -- >> >> Christoph Junghans >> >> Web: http://www.compphys.de >> > >> > -- >> > You received this message because you are subscribed to the Google >> > Groups >> > "votca" group. >> > To unsubscribe from this group and stop receiving emails from it, send >> > an >> > email to votca+un...@googlegroups.com. >> > To post to this group, send email to vo...@googlegroups.com. >> > Visit this group at https://groups.google.com/group/votca. >> > For more options, visit https://groups.google.com/d/optout. >> >> >> >> -- >> Christoph Junghans >> Web: http://www.compphys.de > > -- > You received this message because you are subscribed to the Google Groups > "votca" group. > To unsubscribe from this group and stop receiving emails from it, send an > email to votca+unsubscr...@googlegroups.com. > To post to this group, send email to votca@googlegroups.com. > Visit this group at https://groups.google.com/group/votca. > For more options, visit https://groups.google.com/d/optout. -- Christoph Junghans Web: http://www.compphys.de -- You received this message because
Re: [votca] Missing, not found Eigen3 during VOTCA installation
On Thursday, July 19, 2018 at 4:48:14 PM UTC+1, Christoph Junghans wrote: > > >> > >> > We recently fixed an issue in the Eigen3 detection: > >> > > >> > > https://github.com/votca/votca/commit/8fdcedae9b46e1739fa2ef8589cd5a8f6881d420 > > >> > which includes: > >> > > >> > > https://github.com/votca/tools/commit/3ee8b88e6022772b843f21a04f66a5bd8bfddd09 > > >> > > >> > > https://github.com/votca/csg/commit/c3f9b3e2841c4b5c0eac20e4d843f6b108750ecf > >> > Did you use that version? > > > > > > No, I have not tried any newer version yet. My aim was to get the latest > > release installed, which spack did succeed to do (v1.4.1). > But then I don't understand your original error because votca-csg > 1.4.1 doesn't depend on Eigen3. > I guess I meant (implicitly) that I tried to follow the instructions for installation using cmake found on one of the VOTCA's webpages, and that's when I encountered the error message about eigen3 (not sure now what version it was, but I think 1.5.1). But then I went the spack way and was satisfied. Since then I have not tried cmake for any other version. But I may try on my home PC soon. > > > > > BTW, when I tried to install with apt-get nothing happened: no votca > package > > found. Perhaps it would only work for 2016(+) Ubuntu? > Yes, only 2016.4 and later: > > https://packages.ubuntu.com/search?keywords=votca-csg=names=all=all > > and v1.4.1 only in Ubuntu 18.04! > > > > >> > >> > > >> >> > >> >> Not sure what went wrong, but I had to use alternative way of > >> >> installation > >> >> via spack, and it worked eventually, although it lloked like spack > >> >> installed > >> >> ALL the dependencies along with VOTCA in a separate directory, which > is > >> >> of > >> >> course an overkill. > >> > That is Spack's design, so don't complain to me! And yes we need to > >> > update the dependencies of the VOTCA package in Spack. > >> https://github.com/spack/spack/pull/8757 > > > > > > I see... Otherwise I also noticed that spack installs csg and tools > > separately in two directories beside each other. But then VOTCARC.bash > etc > > occur in the tools/bin and VOTCASHARE points at votca_tools/share > instead of > > votca_csg/share, so the scripts/inverse are not found. I had to reset > > VOTCASHARE correctly in my .bashrc. > Good point I will have to think, how to fix that. I think the VOTCARC > file should get installed to start with as csg_inverse will > auto-detect the location (using csg_call in your PATH) if VOTCASHARE > isn't set. > > Christoph > > > > > I mentioned this for other users to be aware. > > > > Andrey > >> > >> > >> >> > >> >> I suppose this post is just to notify the current developers that > there > >> >> might be some issue with finding an exiasting Eigen3 dir. > >> > Thanks for letting us know, can you try if above versions fix the > issue > >> > for you? > >> > > >> > Christoph > >> >> > >> >> Thanks > >> >> Andrey > >> >> > >> >> -- > >> >> You received this message because you are subscribed to the Google > >> >> Groups > >> >> "votca" group. > >> >> To unsubscribe from this group and stop receiving emails from it, > send > >> >> an > >> >> email to votca+un...@googlegroups.com. > >> >> To post to this group, send email to vo...@googlegroups.com. > >> >> Visit this group at https://groups.google.com/group/votca. > >> >> For more options, visit https://groups.google.com/d/optout. > >> > > >> > > >> > > >> > -- > >> > Christoph Junghans > >> > Web: http://www.compphys.de > >> > >> > >> > >> -- > >> Christoph Junghans > >> Web: http://www.compphys.de > > > > -- > > You received this message because you are subscribed to the Google > Groups > > "votca" group. > > To unsubscribe from this group and stop receiving emails from it, send > an > > email to votca+un...@googlegroups.com . > > To post to this group, send email to vo...@googlegroups.com > . > > Visit this group at https://groups.google.com/group/votca. > > For more options, visit https://groups.google.com/d/optout. > > > > -- > Christoph Junghans > Web: http://www.compphys.de > -- You received this message because you are subscribed to the Google Groups "votca" group. To unsubscribe from this group and stop receiving emails from it, send an email to votca+unsubscr...@googlegroups.com. To post to this group, send email to votca@googlegroups.com. Visit this group at https://groups.google.com/group/votca. For more options, visit https://groups.google.com/d/optout.
Re: [votca] Missing, not found Eigen3 during VOTCA installation
On Thu, Jul 19, 2018 at 9:33 AM, 'Andrey Brukhno' via votca wrote: > > > On Thursday, July 19, 2018 at 3:27:52 PM UTC+1, Christoph Junghans wrote: >> >> On Wed, Jul 18, 2018 at 12:20 PM, Christoph Junghans >> wrote: >> > On Wed, Jul 18, 2018 at 12:04 PM, 'Andrey Brukhno' via votca >> > wrote: >> >> Hello, >> >> >> >> The last time I was installing the CSG package in my Ubuntu (up-to-date >> >> 2014 >> >> LTS) I got this error from cmake: eigen3 not found, with a suggestion >> >> to >> >> provide the path to it. I then downloaded the library from their >> >> website, >> >> installed it and added its include directory to both my $PATH and to >> >> the >> >> environment under the suggested name EIGEN3_INCLUDE_DIR. But cmake >> >> still >> >> complained and stopped with the same error, even when I fed it the >> >> flag: >> >> -DEIGEN3_INCLUDE_DIR=. >> > Just a reminder that 2014 was already 4 years ago ;-) > > > Thanks, up to now it did not hurt to stay with that version, but eventually > yes an upgrade is pending. :) > >> >> > We recently fixed an issue in the Eigen3 detection: >> > >> > https://github.com/votca/votca/commit/8fdcedae9b46e1739fa2ef8589cd5a8f6881d420 >> > which includes: >> > >> > https://github.com/votca/tools/commit/3ee8b88e6022772b843f21a04f66a5bd8bfddd09 >> > >> > https://github.com/votca/csg/commit/c3f9b3e2841c4b5c0eac20e4d843f6b108750ecf >> > Did you use that version? > > > No, I have not tried any newer version yet. My aim was to get the latest > release installed, which spack did succeed to do (v1.4.1). But then I don't understand your original error because votca-csg 1.4.1 doesn't depend on Eigen3. > > BTW, when I tried to install with apt-get nothing happened: no votca package > found. Perhaps it would only work for 2016(+) Ubuntu? Yes, only 2016.4 and later: https://packages.ubuntu.com/search?keywords=votca-csg=names=all=all and v1.4.1 only in Ubuntu 18.04! > >> >> > >> >> >> >> Not sure what went wrong, but I had to use alternative way of >> >> installation >> >> via spack, and it worked eventually, although it lloked like spack >> >> installed >> >> ALL the dependencies along with VOTCA in a separate directory, which is >> >> of >> >> course an overkill. >> > That is Spack's design, so don't complain to me! And yes we need to >> > update the dependencies of the VOTCA package in Spack. >> https://github.com/spack/spack/pull/8757 > > > I see... Otherwise I also noticed that spack installs csg and tools > separately in two directories beside each other. But then VOTCARC.bash etc > occur in the tools/bin and VOTCASHARE points at votca_tools/share instead of > votca_csg/share, so the scripts/inverse are not found. I had to reset > VOTCASHARE correctly in my .bashrc. Good point I will have to think, how to fix that. I think the VOTCARC file should get installed to start with as csg_inverse will auto-detect the location (using csg_call in your PATH) if VOTCASHARE isn't set. Christoph > > I mentioned this for other users to be aware. > > Andrey >> >> >> >> >> >> I suppose this post is just to notify the current developers that there >> >> might be some issue with finding an exiasting Eigen3 dir. >> > Thanks for letting us know, can you try if above versions fix the issue >> > for you? >> > >> > Christoph >> >> >> >> Thanks >> >> Andrey >> >> >> >> -- >> >> You received this message because you are subscribed to the Google >> >> Groups >> >> "votca" group. >> >> To unsubscribe from this group and stop receiving emails from it, send >> >> an >> >> email to votca+un...@googlegroups.com. >> >> To post to this group, send email to vo...@googlegroups.com. >> >> Visit this group at https://groups.google.com/group/votca. >> >> For more options, visit https://groups.google.com/d/optout. >> > >> > >> > >> > -- >> > Christoph Junghans >> > Web: http://www.compphys.de >> >> >> >> -- >> Christoph Junghans >> Web: http://www.compphys.de > > -- > You received this message because you are subscribed to the Google Groups > "votca" group. > To unsubscribe from this group and stop receiving emails from it, send an > email to votca+unsubscr...@googlegroups.com. > To post to this group, send email to votca@googlegroups.com. > Visit this group at https://groups.google.com/group/votca. > For more options, visit https://groups.google.com/d/optout. -- Christoph Junghans Web: http://www.compphys.de -- You received this message because you are subscribed to the Google Groups "votca" group. To unsubscribe from this group and stop receiving emails from it, send an email to votca+unsubscr...@googlegroups.com. To post to this group, send email to votca@googlegroups.com. Visit this group at https://groups.google.com/group/votca. For more options, visit https://groups.google.com/d/optout.
Re: [votca] Missing, not found Eigen3 during VOTCA installation
On Thursday, July 19, 2018 at 3:27:52 PM UTC+1, Christoph Junghans wrote: > > On Wed, Jul 18, 2018 at 12:20 PM, Christoph Junghans > wrote: > > On Wed, Jul 18, 2018 at 12:04 PM, 'Andrey Brukhno' via votca > > > wrote: > >> Hello, > >> > >> The last time I was installing the CSG package in my Ubuntu (up-to-date > 2014 > >> LTS) I got this error from cmake: eigen3 not found, with a suggestion > to > >> provide the path to it. I then downloaded the library from their > website, > >> installed it and added its include directory to both my $PATH and to > the > >> environment under the suggested name EIGEN3_INCLUDE_DIR. But cmake > still > >> complained and stopped with the same error, even when I fed it the > flag: > >> -DEIGEN3_INCLUDE_DIR=. > > Just a reminder that 2014 was already 4 years ago ;-) > Thanks, up to now it did not hurt to stay with that version, but eventually yes an upgrade is pending. :) > > We recently fixed an issue in the Eigen3 detection: > > > https://github.com/votca/votca/commit/8fdcedae9b46e1739fa2ef8589cd5a8f6881d420 > > > which includes: > > > https://github.com/votca/tools/commit/3ee8b88e6022772b843f21a04f66a5bd8bfddd09 > > > > https://github.com/votca/csg/commit/c3f9b3e2841c4b5c0eac20e4d843f6b108750ecf > > Did you use that version? > No, I have not tried any newer version yet. My aim was to get the latest release installed, which spack did succeed to do (v1.4.1). BTW, when I tried to install with apt-get nothing happened: no votca package found. Perhaps it would only work for 2016(+) Ubuntu? > > > >> > >> Not sure what went wrong, but I had to use alternative way of > installation > >> via spack, and it worked eventually, although it lloked like spack > installed > >> ALL the dependencies along with VOTCA in a separate directory, which is > of > >> course an overkill. > > That is Spack's design, so don't complain to me! And yes we need to > > update the dependencies of the VOTCA package in Spack. > https://github.com/spack/spack/pull/8757 > I see... Otherwise I also noticed that spack installs csg and tools separately in two directories beside each other. But then VOTCARC.bash etc occur in the tools/bin and VOTCASHARE points at votca_tools/share instead of votca_csg/share, so the scripts/inverse are not found. I had to reset VOTCASHARE correctly in my .bashrc. I mentioned this for other users to be aware. Andrey > > >> > >> I suppose this post is just to notify the current developers that there > >> might be some issue with finding an exiasting Eigen3 dir. > > Thanks for letting us know, can you try if above versions fix the issue > for you? > > > > Christoph > >> > >> Thanks > >> Andrey > >> > >> -- > >> You received this message because you are subscribed to the Google > Groups > >> "votca" group. > >> To unsubscribe from this group and stop receiving emails from it, send > an > >> email to votca+un...@googlegroups.com . > >> To post to this group, send email to vo...@googlegroups.com > . > >> Visit this group at https://groups.google.com/group/votca. > >> For more options, visit https://groups.google.com/d/optout. > > > > > > > > -- > > Christoph Junghans > > Web: http://www.compphys.de > > > > -- > Christoph Junghans > Web: http://www.compphys.de > -- You received this message because you are subscribed to the Google Groups "votca" group. To unsubscribe from this group and stop receiving emails from it, send an email to votca+unsubscr...@googlegroups.com. To post to this group, send email to votca@googlegroups.com. Visit this group at https://groups.google.com/group/votca. For more options, visit https://groups.google.com/d/optout.
Re: [votca] Missing, not found Eigen3 during VOTCA installation
On Wed, Jul 18, 2018 at 12:20 PM, Christoph Junghans wrote: > On Wed, Jul 18, 2018 at 12:04 PM, 'Andrey Brukhno' via votca > wrote: >> Hello, >> >> The last time I was installing the CSG package in my Ubuntu (up-to-date 2014 >> LTS) I got this error from cmake: eigen3 not found, with a suggestion to >> provide the path to it. I then downloaded the library from their website, >> installed it and added its include directory to both my $PATH and to the >> environment under the suggested name EIGEN3_INCLUDE_DIR. But cmake still >> complained and stopped with the same error, even when I fed it the flag: >> -DEIGEN3_INCLUDE_DIR=. > Just a reminder that 2014 was already 4 years ago ;-) > We recently fixed an issue in the Eigen3 detection: > https://github.com/votca/votca/commit/8fdcedae9b46e1739fa2ef8589cd5a8f6881d420 > which includes: > https://github.com/votca/tools/commit/3ee8b88e6022772b843f21a04f66a5bd8bfddd09 > https://github.com/votca/csg/commit/c3f9b3e2841c4b5c0eac20e4d843f6b108750ecf > Did you use that version? > >> >> Not sure what went wrong, but I had to use alternative way of installation >> via spack, and it worked eventually, although it lloked like spack installed >> ALL the dependencies along with VOTCA in a separate directory, which is of >> course an overkill. > That is Spack's design, so don't complain to me! And yes we need to > update the dependencies of the VOTCA package in Spack. https://github.com/spack/spack/pull/8757 >> >> I suppose this post is just to notify the current developers that there >> might be some issue with finding an exiasting Eigen3 dir. > Thanks for letting us know, can you try if above versions fix the issue for > you? > > Christoph >> >> Thanks >> Andrey >> >> -- >> You received this message because you are subscribed to the Google Groups >> "votca" group. >> To unsubscribe from this group and stop receiving emails from it, send an >> email to votca+unsubscr...@googlegroups.com. >> To post to this group, send email to votca@googlegroups.com. >> Visit this group at https://groups.google.com/group/votca. >> For more options, visit https://groups.google.com/d/optout. > > > > -- > Christoph Junghans > Web: http://www.compphys.de -- Christoph Junghans Web: http://www.compphys.de -- You received this message because you are subscribed to the Google Groups "votca" group. To unsubscribe from this group and stop receiving emails from it, send an email to votca+unsubscr...@googlegroups.com. To post to this group, send email to votca@googlegroups.com. Visit this group at https://groups.google.com/group/votca. For more options, visit https://groups.google.com/d/optout.
Re: [votca] Missing, not found Eigen3 during VOTCA installation
On Wed, Jul 18, 2018 at 12:04 PM, 'Andrey Brukhno' via votca wrote: > Hello, > > The last time I was installing the CSG package in my Ubuntu (up-to-date 2014 > LTS) I got this error from cmake: eigen3 not found, with a suggestion to > provide the path to it. I then downloaded the library from their website, > installed it and added its include directory to both my $PATH and to the > environment under the suggested name EIGEN3_INCLUDE_DIR. But cmake still > complained and stopped with the same error, even when I fed it the flag: > -DEIGEN3_INCLUDE_DIR=. Just a reminder that 2014 was already 4 years ago ;-) We recently fixed an issue in the Eigen3 detection: https://github.com/votca/votca/commit/8fdcedae9b46e1739fa2ef8589cd5a8f6881d420 which includes: https://github.com/votca/tools/commit/3ee8b88e6022772b843f21a04f66a5bd8bfddd09 https://github.com/votca/csg/commit/c3f9b3e2841c4b5c0eac20e4d843f6b108750ecf Did you use that version? > > Not sure what went wrong, but I had to use alternative way of installation > via spack, and it worked eventually, although it lloked like spack installed > ALL the dependencies along with VOTCA in a separate directory, which is of > course an overkill. That is Spack's design, so don't complain to me! And yes we need to update the dependencies of the VOTCA package in Spack. > > I suppose this post is just to notify the current developers that there > might be some issue with finding an exiasting Eigen3 dir. Thanks for letting us know, can you try if above versions fix the issue for you? Christoph > > Thanks > Andrey > > -- > You received this message because you are subscribed to the Google Groups > "votca" group. > To unsubscribe from this group and stop receiving emails from it, send an > email to votca+unsubscr...@googlegroups.com. > To post to this group, send email to votca@googlegroups.com. > Visit this group at https://groups.google.com/group/votca. > For more options, visit https://groups.google.com/d/optout. -- Christoph Junghans Web: http://www.compphys.de -- You received this message because you are subscribed to the Google Groups "votca" group. To unsubscribe from this group and stop receiving emails from it, send an email to votca+unsubscr...@googlegroups.com. To post to this group, send email to votca@googlegroups.com. Visit this group at https://groups.google.com/group/votca. For more options, visit https://groups.google.com/d/optout.
