Re: [Wien] Jeff=1/2 and 3/2 states using case.cf files
Thanks for the explanations. However, according to my tests and the UG 8.19.2, it seems such format is deprecated since the qtl version of Wien2k07. Indeed, the qtlmain.f file does not accept the stars. In such a way, it seems the summation is done over all states. W. Le 6/02/19 à 15:41, Peter Blaha a écrit : I'm not the full expert in relativistic qtl, but to my understanding the * indicates the end of a summation. Consider the p-states, splitted into 1/2 and 3/2: The cf file looks like: (SRC_templates) -.81649658 0. 0. 0. 0. 0. 0. 0. .57735027 0. 0. 0. *0. 0. -.57735027 0. 0. 0. 0. 0. 0. 0. .81649658 0. 0. 0. 0. 0. 0. 0. 1. 0. 0. 0. 0. 0. .57735027 0. 0. 0. 0. 0. 0. 0. .81649658 0. 0. 0. 0. 0. .81649658 0. 0. 0. 0. 0. 0. 0. .57735027 0. *0. 0. 0. 0. 1. 0. 0. 0. 0. 0. 0. 0. There are 6 lines, and obviously, p-1/2 is obtained by summation over the first 2 lines, p-3/2 over the following 4 lines. Another example is the case.cf_f_mm2 example, where the f-states are splitted/summed according to mm2 Symmetry and the * indicate the summations. If you don't want any summation, just start each line with a *. On 1/30/19 1:59 AM, William Lafargue-dit-Hauret wrote: Dear Wien2k users, I am studying the Jeff = 1/2 and 3/2 states of an iridate compound. More specifically, I would like to evidence them into bandstructure and/or DOS. I found in the mailing-list the following messages, posted 5 years ago : https://www.mail-archive.com/wien@zeus.theochem.tuwien.ac.at/msg09761.html which mentionned that it is possible to specify (explicitly) the splitting into case.cfXX files (XX being the atom with qsplit = 6 into the case.inq file). I need your help to know whether I have written it in a proper way. For example, let's consider the state |1/2,1/2> = [ 2i/sqrt(6) Y_2^-1 ] + [ i/sqrt(6) (Y_2^-2 - Y_2^2) ]. The first and second terms are associated to spin down and up, respectively. In such a case, I would describe this state as : => 0. 1/sqrt(6) 0. 0. 0. 0. 0. 0. 0. -1/sqrt(6) 0. 0. 0. 2/sqrt(6) 0. 0. 0. 0. 0. 0. Moreover, some * marks are present into the example files. The comment file, located in the SRC_qtl directory, mentions that they "have meaning when SUMA is in line 1 case.inq". But such line seems to be deprecated, isn't it ? Thank you for your help. Cheers, William ___ Wien mailing list Wien@zeus.theochem.tuwien.ac.at http://zeus.theochem.tuwien.ac.at/mailman/listinfo/wien SEARCH the MAILING-LIST at: http://www.mail-archive.com/wien@zeus.theochem.tuwien.ac.at/index.html ___ Wien mailing list Wien@zeus.theochem.tuwien.ac.at http://zeus.theochem.tuwien.ac.at/mailman/listinfo/wien SEARCH the MAILING-LIST at: http://www.mail-archive.com/wien@zeus.theochem.tuwien.ac.at/index.html
[Wien] Jeff=1/2 and 3/2 states using case.cf files
Dear Wien2k users, I am studying the Jeff = 1/2 and 3/2 states of an iridate compound. More specifically, I would like to evidence them into bandstructure and/or DOS. I found in the mailing-list the following messages, posted 5 years ago : https://www.mail-archive.com/wien@zeus.theochem.tuwien.ac.at/msg09761.html which mentionned that it is possible to specify (explicitly) the splitting into case.cfXX files (XX being the atom with qsplit = 6 into the case.inq file). I need your help to know whether I have written it in a proper way. For example, let's consider the state |1/2,1/2> = [ 2i/sqrt(6) Y_2^-1 ] + [ i/sqrt(6) (Y_2^-2 - Y_2^2) ]. The first and second terms are associated to spin down and up, respectively. In such a case, I would describe this state as : => 0. 1/sqrt(6) 0. 0. 0. 0. 0. 0. 0. -1/sqrt(6) 0. 0. 0. 2/sqrt(6) 0. 0. 0. 0. 0. 0. Moreover, some * marks are present into the example files. The comment file, located in the SRC_qtl directory, mentions that they "have meaning when SUMA is in line 1 case.inq". But such line seems to be deprecated, isn't it ? Thank you for your help. Cheers, William ___ Wien mailing list Wien@zeus.theochem.tuwien.ac.at http://zeus.theochem.tuwien.ac.at/mailman/listinfo/wien SEARCH the MAILING-LIST at: http://www.mail-archive.com/wien@zeus.theochem.tuwien.ac.at/index.html
Re: [Wien] Error in Hub-U calculation
Did you already try to run an L(S)DA+U calculation without restarting from a previous L(S)DA one ? Also, I am not sure the -dm option is necessary in this case. W. De: "shaymlal dayananda" À: "A. Mailing List for WIEN2k Users" Envoyé: Mardi 7 Août 2018 14:49:33 Objet: [Wien] Error in Hub-U calculation On Tuesday, August 7, 2018 12:41 PM, shaymlal dayananda wrote: Dear Developers and users I am in a trouble that I could not recover my problem yet. I tried all of your suggestions. I am summarizing them below. 1. I finished runsp_lapw -NI -p -ec 0.0001 correctly and saved the files. 2. I added case.indmc and case.inorb files ( I have copied them one of previous emails) 3. submitted the job runsp_lapw -NI -p -dm -orb -ec 0.0001 4. This job stopped with the same previous errors. Anyway I am coping them again along with case.vorbdef STDOUT cp: cannot create regular file '/localscratch//.tmp_lapw1para.30532': Permission denied cp: cannot stat '/localscratch//.tmp_lapw1para.30532': No such file or directory /localscratch//.tmp_testpara_new.30532_2: Permission denied. grep: /localscratch//.tmp_lapw1para.30532: No such file or directory cut: /localscratch//.tmp_testpara_new.30532_2: No such file or directory forrtl: severe (24): end-of-file during read, unit 7, file /scratch/WIEN2k17/TEST/T-hubU/T-hubU.vorbup Image PC Routine Line Source lapw1c 00461858 Unknown Unknown Unknown lapw1c 00497DDA Unknown Unknown Unknown lapw1c 0042C543 inilpw_ 276 inilpw.f lapw1c 0042F302 MAIN__ 42 lapw1_tmp_.F lapw1c 00403FEE Unknown Unknown Unknown libc.so.6 2AD5081B12E0 Unknown Unknown Unknown lapw1c 00403EEA Unknown Unknown Unknown 5. next I tried: energyup/dn copied to energyup_1/dn_1, all dmat* removed and then tried runsp_lapw -NI -p -dm -orb -ec 0.0001 But it gave me the same error. I has changed the energyup_1/dn_1 (empty now) 6. I tried running x lapw1 with deleting dmat* as William as sugested, but this also leads for the same error as I have given in 5. above. I am very much appreciate if anyone give the correct way to do hubbard U included PARALLEL calculation with Wien2k 17.1. I have asked our supercomputers to install the latest version. But due to internal issue this will be late more than two months more. I cannot wait that long. Thank you Daya On Tuesday, June 26, 2018 2:52 PM, William Lafargue-dit-Hauret wrote: Did you try to add "-s lapw1" in your command line dedicated to the DFT+U calculation ? Remove any *dmat* files before. W. Le 26/06/2018 à 22:46, shaymlal dayananda a écrit : Dear William It is a error (messed up with another case.dayfile ) in the mail when I copy the day file to the mail, other than that , the problem and the errors are the same. Thank you Daya ___ Wien mailing list [ mailto:Wien@zeus.theochem.tuwien.ac.at | Wien@zeus.theochem.tuwien.ac.at ] [ http://zeus.theochem.tuwien.ac.at/mailman/listinfo/wien | http://zeus.theochem.tuwien.ac.at/mailman/listinfo/wien ] SEARCH the MAILING-LIST at: [ http://www.mail-archive.com/wien@zeus.theochem.tuwien.ac.at/index.html | http://www.mail-archive.com/wien@zeus.theochem.tuwien.ac.at/index.html ] -- William LAFARGUE-DIT-HAURET PhD Student -- Institut des Sciences Chimiques de Rennes UMR 6226 Equipe Chimie Théorique Inorganique Université de Rennes 1 - Campus de Beaulieu 35042 Rennes, France Building 10B, Desk 211 Phone: +33 (0)2.23.23.57.91 Email: [ mailto:william.lafargue-dit-hau...@univ-rennes1.fr | william.lafargue-dit-hau...@univ-rennes1.fr ] ___ Wien mailing list [ mailto:Wien@zeus.theochem.tuwien.ac.at | Wien@zeus.theochem.tuwien.ac.at ] [ http://zeus.theochem.tuwien.ac.at/mailman/listinfo/wien | http://zeus.theochem.tuwien.ac.at/mailman/listinfo/wien ] SEARCH the MAILING-LIST at: [ http://www.mail-archive.com/wien@zeus.theochem.tuwien.ac.at/index.html | http://www.mail-archive.com/wien@zeus.theochem.tuwien.ac.at/index.html ] ___ Wien mailing list Wien@zeus.theochem.tuwien.ac.at http://zeus.theochem.tuwien.ac.at/mailman/listinfo/wien SEARCH the MAILING-LIST at: http://www.mail-archive.com/wien@zeus.theochem.tuwien.ac.at/index.html ___ Wien mailing list Wien@zeus.theochem.tuwien.ac.at http://zeus.theochem.tuwien.ac.at/mailman/listinfo/wien SEARCH the MAILING-LIST at: http://www.mail-archive.com/wien@zeus.theochem.tuwien.ac.at/index.html
Re: [Wien] Error in DOS calculation with WIEN2k 17.1
case.vector* files are located into the SCRATCH directory. If you would like to redefine it for a specific job, you can add the option "-scratch directory_name" to the run_lapw command (Section 5.1.4 UG). Best, William Le 31/07/2018 à 20:16, prasad jayasena a écrit : Dear William Thank you. The calculation is running now. Hope it will finish smoothly Is there a way to set this vector files to generate in the proper place instead of in the working directory? (Or to set DOS to get the files from working directory?) Thank you again for the prompt reply Prasad On Tuesday, July 31, 2018, 12:01:33 p.m. CST, William Lafargue-dit-Hauret wrote: Dear Prasad, case.vectorup/dn must be present in the scratch directory, not in the working directory. Best, William Le 31/07/2018 à 19:55, prasad jayasena a écrit : Dear developers and users I am using wien2k 17.1 version. I recently completed scf calculation without any error (runsp_lapw -p -i 140 -ec 0.1 -cc 0.0001 -NI). Now I tried calculation of DOS. But when I try *x lapw2 -p -up -qtl *I am getting the following error. running in single mode forrtl: severe (24): end-of-file during read, unit 10, file /home/scratch/UB-8.5-5000-SCF.vectorup However, in the working directory, there are two none-empty case. vectorup and case.vectordn files. I cannot solve this error. The other thing is, if I did parallel mode scf calculation I believe it needs to create several vectorup/dn_x files. But here it is a single file. Can someone please let me know what is wrong here. Thank you Prasad ___ Wien mailing list Wien@zeus.theochem.tuwien.ac.at <mailto:Wien@zeus.theochem.tuwien.ac.at> http://zeus.theochem.tuwien.ac.at/mailman/listinfo/wien SEARCH the MAILING-LIST at:http://www.mail-archive.com/wien@zeus.theochem.tuwien.ac.at/index.html -- William LAFARGUE-DIT-HAURET PhD Student -- Institut des Sciences Chimiques de Rennes UMR 6226 Equipe Chimie Théorique Inorganique Université de Rennes 1 - Campus de Beaulieu 35042 Rennes, France Building 10B, Desk 211 Phone: +33 (0)2.23.23.57.91 Email:william.lafargue-dit-hau...@univ-rennes1.fr <mailto:william.lafargue-dit-hau...@univ-rennes1.fr> ___ Wien mailing list Wien@zeus.theochem.tuwien.ac.at <mailto:Wien@zeus.theochem.tuwien.ac.at> http://zeus.theochem.tuwien.ac.at/mailman/listinfo/wien SEARCH the MAILING-LIST at: http://www.mail-archive.com/wien@zeus.theochem.tuwien.ac.at/index.html ___ Wien mailing list Wien@zeus.theochem.tuwien.ac.at http://zeus.theochem.tuwien.ac.at/mailman/listinfo/wien SEARCH the MAILING-LIST at: http://www.mail-archive.com/wien@zeus.theochem.tuwien.ac.at/index.html -- William LAFARGUE-DIT-HAURET PhD Student -- Institut des Sciences Chimiques de Rennes UMR 6226 Equipe Chimie Théorique Inorganique Université de Rennes 1 - Campus de Beaulieu 35042 Rennes, France Building 10B, Desk 211 Phone: +33 (0)2.23.23.57.91 Email: william.lafargue-dit-hau...@univ-rennes1.fr ___ Wien mailing list Wien@zeus.theochem.tuwien.ac.at http://zeus.theochem.tuwien.ac.at/mailman/listinfo/wien SEARCH the MAILING-LIST at: http://www.mail-archive.com/wien@zeus.theochem.tuwien.ac.at/index.html
Re: [Wien] Error in DOS calculation with WIEN2k 17.1
Dear Prasad, case.vectorup/dn must be present in the scratch directory, not in the working directory. Best, William Le 31/07/2018 à 19:55, prasad jayasena a écrit : Dear developers and users I am using wien2k 17.1 version. I recently completed scf calculation without any error (runsp_lapw -p -i 140 -ec 0.1 -cc 0.0001 -NI). Now I tried calculation of DOS. But when I try *x lapw2 -p -up -qtl *I am getting the following error. running in single mode forrtl: severe (24): end-of-file during read, unit 10, file /home/scratch/UB-8.5-5000-SCF.vectorup However, in the working directory, there are two none-empty case. vectorup and case.vectordn files. I cannot solve this error. The other thing is, if I did parallel mode scf calculation I believe it needs to create several vectorup/dn_x files. But here it is a single file. Can someone please let me know what is wrong here. Thank you Prasad ___ Wien mailing list Wien@zeus.theochem.tuwien.ac.at http://zeus.theochem.tuwien.ac.at/mailman/listinfo/wien SEARCH the MAILING-LIST at: http://www.mail-archive.com/wien@zeus.theochem.tuwien.ac.at/index.html -- William LAFARGUE-DIT-HAURET PhD Student -- Institut des Sciences Chimiques de Rennes UMR 6226 Equipe Chimie Théorique Inorganique Université de Rennes 1 - Campus de Beaulieu 35042 Rennes, France Building 10B, Desk 211 Phone: +33 (0)2.23.23.57.91 Email: william.lafargue-dit-hau...@univ-rennes1.fr ___ Wien mailing list Wien@zeus.theochem.tuwien.ac.at http://zeus.theochem.tuwien.ac.at/mailman/listinfo/wien SEARCH the MAILING-LIST at: http://www.mail-archive.com/wien@zeus.theochem.tuwien.ac.at/index.html
Re: [Wien] Error in Hub-U calculation
Did you try to add "-s lapw1" in your command line dedicated to the DFT+U calculation ? Remove any *dmat* files before. W. Le 26/06/2018 à 22:46, shaymlal dayananda a écrit : Dear William It is a error (messed up with another case.dayfile ) in the mail when I copy the day file to the mail, other than that , the problem and the errors are the same. Thank you Daya ___ Wien mailing list Wien@zeus.theochem.tuwien.ac.at http://zeus.theochem.tuwien.ac.at/mailman/listinfo/wien SEARCH the MAILING-LIST at: http://www.mail-archive.com/wien@zeus.theochem.tuwien.ac.at/index.html -- William LAFARGUE-DIT-HAURET PhD Student -- Institut des Sciences Chimiques de Rennes UMR 6226 Equipe Chimie Théorique Inorganique Université de Rennes 1 - Campus de Beaulieu 35042 Rennes, France Building 10B, Desk 211 Phone: +33 (0)2.23.23.57.91 Email: william.lafargue-dit-hau...@univ-rennes1.fr ___ Wien mailing list Wien@zeus.theochem.tuwien.ac.at http://zeus.theochem.tuwien.ac.at/mailman/listinfo/wien SEARCH the MAILING-LIST at: http://www.mail-archive.com/wien@zeus.theochem.tuwien.ac.at/index.html
Re: [Wien] Error in Hub-U calculation
Hi, I noticed in your dayfile your filenames and directory name are inconsistent. -- case.dayfile is ; Calculating *U3O8-8.5-5000* in /scratch/WIEN2k17/*UB-8.5-5000* on gra144 with PID 28448 ... -- William Le 26/06/2018 à 21:29, shaymlal dayananda a écrit : Dear Prof. Blaha Thank you for your reply, I tried your instructions, but I am afraid that I am still getting the same error. This is what I did1. I copied case.energyup/dn as case.energyup_1/dn_12 copied case.dmatup_old and case.dmatup_old to case.dmatup and case.dmatup3. removed *.bro* ( But there were no files) And rerun the job script. But again I got the same error I got before. I noticed that now the energyup_1 file is empty again and case.enegydn_1 is missing. I repeated this in fresh directory, but nothing changes. My lapw with spin polarization runs without any problem. Only this hubard U inclusion gives troubles. Can this be an issue with my job script (attached in the previous reply) or installation? Thank you and I appreciate your valuable advice and support.I am re-sending this mail since I didn't get any reply yet. My apology about that. Daya ___ Wien mailing list Wien@zeus.theochem.tuwien.ac.at http://zeus.theochem.tuwien.ac.at/mailman/listinfo/wien SEARCH the MAILING-LIST at: http://www.mail-archive.com/wien@zeus.theochem.tuwien.ac.at/index.html -- William LAFARGUE-DIT-HAURET PhD Student -- Institut des Sciences Chimiques de Rennes UMR 6226 Equipe Chimie Théorique Inorganique Université de Rennes 1 - Campus de Beaulieu 35042 Rennes, France Building 10B, Desk 211 Phone: +33 (0)2.23.23.57.91 Email: william.lafargue-dit-hau...@univ-rennes1.fr ___ Wien mailing list Wien@zeus.theochem.tuwien.ac.at http://zeus.theochem.tuwien.ac.at/mailman/listinfo/wien SEARCH the MAILING-LIST at: http://www.mail-archive.com/wien@zeus.theochem.tuwien.ac.at/index.html
Re: [Wien] Problem regarding case.inq file
Dear Bushra, As mentioned by the error, you have to reduce your number of studied atoms. After briefly looking at your input file, you can restrict this number to 3 and only specify cases for atoms number 7, 11 and 12. Best, William Le 26/06/2018 à 01:11, BUSHRA SABIR a écrit : Respected Peter Blaha and wien2k users I am working on 30 atom structure with no symmetry present. when i am trying to calculate d states splitting for Ru with following case.inq file (x qtl -band -up) -9.0 3.0 Emin Emax 30 number of atoms 1 -2 0 0 iatom,qsplit,symmetrize,locrot 4 0 1 2 3 nL, l-values 2 -2 0 0 iatom,qsplit,symmetrize,locrot 4 0 1 2 3 nL, l-values 3 -2 0 0 iatom,qsplit,symmetrize,locrot 4 0 1 2 3 nL, l-values 4 -2 0 0 iatom,qsplit,symmetrize,locrot 4 0 1 2 3 nL, l-values 5 -2 0 0 iatom,qsplit,symmetrize,locrot 4 0 1 2 3 nL, l-values 6 -2 0 0 iatom,qsplit,symmetrize,locrot 4 0 1 2 3 nL, l-values 7 2 1 2 iatom,qsplit,symmetrize,locrot 3 0 1 2 nL, l-values -0.6795 -0.2185 0.1643 -.1921 0.517 -0.1568 8 -2 0 0 iatom,qsplit,symmetrize,locrot 2 0 1 nL, l-values 9 -2 0 0 iatom,qsplit,symmetrize,locrot 2 0 1 nL, l-values 10 -2 0 0 iatom,qsplit,symmetrize,locrot 2 0 1 nL, l-values 11 2 1 2 iatom,qsplit,symmetrize,locrot 3 0 1 2 nL, l-values -0.2203 -0.7218 -0.1529 -0.4813 -0.1829 -0.1806 12 2 1 2 iatom,qsplit,symmetrize,locrot 3 0 1 2 nL, l-values 0.6715 0.4586 -0.1752 -0.220 -0.7217 -0.1528 13 -2 0 0 iatom,qsplit,symmetrize,locrot 2 0 1 nL, l-values 14 -2 0 0 iatom,qsplit,symmetrize,locrot 2 0 1 nL, l-values 15 -2 0 0 iatom,qsplit,symmetrize,locrot 2 0 1 nL, l-values 16 -2 0 0 iatom,qsplit,symmetrize,locrot 2 0 1 nL, l-values 17 -2 0 0 iatom,qsplit,symmetrize,locrot 2 0 1 nL, l-values 18 -2 0 0 iatom,qsplit,symmetrize,locrot 2 0 1 nL, l-values 19 -2 0 0 iatom,qsplit,symmetrize,locrot 2 0 1 nL, l-values 20 -2 0 0 iatom,qsplit,symmetrize,locrot 2 0 1 nL, l-values 21 -2 0 0 iatom,qsplit,symmetrize,locrot 2 0 1 nL, l-values 22 -2 0 0 iatom,qsplit,symmetrize,locrot 2 0 1 nL, l-values 23 -2 0 0 iatom,qsplit,symmetrize,locrot 2 0 1 nL, l-values 24 -2 0 0 iatom,qsplit,symmetrize,locrot 2 0 1 nL, l-values 25 -2 0 0 iatom,qsplit,symmetrize,locrot 2 0 1 nL, l-values 26 -2 0 0 iatom,qsplit,symmetrize,locrot 2 0 1 nL, l-values 27 -2 0 0 iatom,qsplit,symmetrize,locrot 2 0 1 nL, l-values 28 -2 0 0 iatom,qsplit,symmetrize,locrot 2 0 1 nL, l-values 29 -2 0 0 iatom,qsplit,symmetrize,locrot 2 0 1 nL, l-values 30 -2 0 0 iatom,qsplit,symmetrize,locrot 2 0 1 nL, l-values it give me error ERROR: more than 25 atoms not supported 0.005u 0.038s 0.00.09 33.3% 0+0k 0+16io 0pf+0w what should i do? Bushra UC Davis,CA ___ Wien mailing list Wien@zeus.theochem.tuwien.ac.at http://zeus.theochem.tuwien.ac.at/mailman/listinfo/wien SEARCH the MAILING-LIST at: http://www.mail-archive.com/wien@zeus.theochem.tuwien.ac.at/index.html -- William LAFARGUE-DIT-HAURET PhD Student -- Institut des Sciences Chimiques de Rennes UMR 6226 Equipe Chimie Théorique Inorganique Université de Rennes 1 - Campus de Beaulieu 35042 Rennes, France Building 10B, Desk 211 Phone: +33 (0)2.23.23.57.91 Email: william.lafargue-dit-hau...@univ-rennes1.fr ___ Wien mailing list Wien@zeus.theochem.tuwien.ac.at http://zeus.theochem.tuwien.ac.at/mailman/listinfo/wien SEARCH the MAILING-LIST at: http://www.mail-archive.com/wien@zeus.theochem.tuwien.ac.at/index.html
Re: [Wien] Transition-State/NEB Calculations
Wien mailing list Wien@zeus.theochem.tuwien.ac.at <mailto:Wien@zeus.theochem.tuwien.ac.at> https://urldefense.proofpoint.com/v2/url?u=http-3A__zeus.theochem.tuwien.ac.at_mailman_listinfo_wien=DwIFAw=yHlS04HhBraes5BQ9ueu5zKhE7rtNXt_d012z2PA6ws=U_T4PL6jwANfAy4rnxTj8IUxm818jnvqKFdqWLwmqg0=M0UybH2-gJMze3tSI4Kh1ezEr54mB7Q2FdhXL7yxSW4=Ee0zsmG3LVm50umzwlug_XAYvuKha_lG1H9uUdZQlNI= <https://urldefense.proofpoint.com/v2/url?u=http-3A__zeus.theochem.tuwien.ac.at_mailman_listinfo_wien=DwIFAw=yHlS04HhBraes5BQ9ueu5zKhE7rtNXt_d012z2PA6ws=U_T4PL6jwANfAy4rnxTj8IUxm818jnvqKFdqWLwmqg0=M0UybH2-gJMze3tSI4Kh1ezEr54mB7Q2FdhXL7yxSW4=Ee0zsmG3LVm50umzwlug_XAYvuKha_lG1H9uUdZQlNI=> SEARCH the MAILING-LIST at: https://urldefense.proofpoint.com/v2/url?u=http-3A__www.mail-2Darchive.com_wien-40zeus.theochem.tuwien.ac.at_index.html=DwIFAw=yHlS04HhBraes5BQ9ueu5zKhE7rtNXt_d012z2PA6ws=U_T4PL6jwANfAy4rnxTj8IUxm818jnvqKFdqWLwmqg0=M0UybH2-gJMze3tSI4Kh1ezEr54mB7Q2FdhXL7yxSW4=NfajgiBSfBEAqcHcnDRizCluWrlYKa_vX-RHicaZuMs= <https://urldefense.proofpoint.com/v2/url?u=http-3A__www.mail-2Darchive.com_wien-40zeus.theochem.tuwien.ac.at_index.html=DwIFAw=yHlS04HhBraes5BQ9ueu5zKhE7rtNXt_d012z2PA6ws=U_T4PL6jwANfAy4rnxTj8IUxm818jnvqKFdqWLwmqg0=M0UybH2-gJMze3tSI4Kh1ezEr54mB7Q2FdhXL7yxSW4=NfajgiBSfBEAqcHcnDRizCluWrlYKa_vX-RHicaZuMs=> -- Professor Laurence Marks "Research is to see what everybody else has seen, and to think what nobody else has thought", Albert Szent-Gyorgi www.numis.northwestern.edu <http://www.numis.northwestern.edu> ; Corrosion in 4D: MURI4D.numis.northwestern.edu <http://MURI4D.numis.northwestern.edu> Partner of the CFW 100% program for gender equity, www.cfw.org/100-percent <http://www.cfw.org/100-percent> Co-Editor, Acta Cryst A ___ Wien mailing list Wien@zeus.theochem.tuwien.ac.at http://zeus.theochem.tuwien.ac.at/mailman/listinfo/wien SEARCH the MAILING-LIST at: http://www.mail-archive.com/wien@zeus.theochem.tuwien.ac.at/index.html -- William LAFARGUE-DIT-HAURET PhD Student -- Institut des Sciences Chimiques de Rennes UMR 6226 Equipe Chimie Théorique Inorganique Université de Rennes 1 - Campus de Beaulieu 35042 Rennes, France Building 10B, Desk 211 Phone: +33 (0)2.23.23.57.91 Email: william.lafargue-dit-hau...@univ-rennes1.fr ___ Wien mailing list Wien@zeus.theochem.tuwien.ac.at http://zeus.theochem.tuwien.ac.at/mailman/listinfo/wien SEARCH the MAILING-LIST at: http://www.mail-archive.com/wien@zeus.theochem.tuwien.ac.at/index.html
Re: [Wien] Cif2Struct again
Dear Sherif, Just open your cif file using a Notepad or a terminal, and you will see more than one cell parameters and/or atomic coordinates are present, as Xavier said. You can modify it by hand, but I recommend you to use a crystallographic software to generate it safely (Endavour for example). Cheers, William Le 27/05/2018 à 22:49, Sherif Yehia a écrit : Dear users and expert I put question before on how to change cif to struct files I got kindly help on changing cif to struct from Xavier Rocquefelte <https://www.mail-archive.com/search?l=wien@zeus.theochem.tuwien.ac.at=from:%22Xavier+Rocquefelte%22> Tue, 06 Mar 2018 <https://www.mail-archive.com/search?l=wien@zeus.theochem.tuwien.ac.at=date:20180306> Your cif file contains 3 settings explaining why cif2struct cannot work. unfortunately I didn't understand what he did to change it to one setting (my mistake) I am attaching another one for YFe3 Can I get some help with explanation on how to change .cif to struct to work right Thank you in advance ___ Wien mailing list Wien@zeus.theochem.tuwien.ac.at http://zeus.theochem.tuwien.ac.at/mailman/listinfo/wien SEARCH the MAILING-LIST at: http://www.mail-archive.com/wien@zeus.theochem.tuwien.ac.at/index.html -- William LAFARGUE-DIT-HAURET PhD Student -- Institut des Sciences Chimiques de Rennes UMR 6226 Equipe Chimie Théorique Inorganique Université de Rennes 1 - Campus de Beaulieu 35042 Rennes, France Building 10B, Desk 211 Phone: +33 (0)2.23.23.57.91 Email: william.lafargue-dit-hau...@univ-rennes1.fr ___ Wien mailing list Wien@zeus.theochem.tuwien.ac.at http://zeus.theochem.tuwien.ac.at/mailman/listinfo/wien SEARCH the MAILING-LIST at: http://www.mail-archive.com/wien@zeus.theochem.tuwien.ac.at/index.html
Re: [Wien] Wien Digest, Vol 147, Issue 4
Dear Victor, If you remove the space between « print » and the first parenthesis, you can do it in python 3 ; this is the print function. Best regards, William > Le 25 févr. 2018 à 08:04, Badis Bennecera écrit : > > Dear Victor, > I must confess, that when I wrote the answer I did not even think about > using a correct fortran language, i mean using correct fortran statements. > > Thank you very much for correcting me. > > All the best and have a nice day > > Badis > > > > > From: Wien on behalf of Víctor > Luaña Cabal > Sent: Sunday, February 25, 2018 5:39 AM > To: A Mailing list for WIEN2k users > Cc: Victor Luaña > Subject: Re: [Wien] Wien Digest, Vol 147, Issue 4 > > On Sun, Feb 25, 2018 at 06:06:39AM +, Badis Bennecer wrote: > > Dear Victor, > > > > > > It is minus signs > > Badis, > > Sorry, but my main question was the language (computer language). > Otherwise > > print (( 2.8*2)*2+(-0.31749*2)+( -0.98948)) > > the result is 6.82026 > > Maybe you were using some form of lisp? The odd number of parenthesis: > open 5, close 4, were my main trouble. I had to add an extra ")". Of > course, minus signs obtained from web pages may cause awful errors so > it is important to prevent that. > > Best regards, > Víctor Luaña > ___ > Wien mailing list > Wien@zeus.theochem.tuwien.ac.at > http://zeus.theochem.tuwien.ac.at/mailman/listinfo/wien > SEARCH the MAILING-LIST at: > http://www.mail-archive.com/wien@zeus.theochem.tuwien.ac.at/index.html > ___ > Wien mailing list > Wien@zeus.theochem.tuwien.ac.at > http://zeus.theochem.tuwien.ac.at/mailman/listinfo/wien > SEARCH the MAILING-LIST at: > http://www.mail-archive.com/wien@zeus.theochem.tuwien.ac.at/index.html ___ Wien mailing list Wien@zeus.theochem.tuwien.ac.at http://zeus.theochem.tuwien.ac.at/mailman/listinfo/wien SEARCH the MAILING-LIST at: http://www.mail-archive.com/wien@zeus.theochem.tuwien.ac.at/index.html
Re: [Wien] Magnetocrystalline anisotropy
Dear Prof. Blaha and Marks, Thank you for your comments and suggestions. Looking at the SRC_orb/main.f, orb seems to read potential files to mix with old vorb files. William Le 17/01/2018 à 08:03, Peter Blaha a écrit : Just a few comments: In many posts to this topic I saw the -c switch. This is not necessary and prone to errors. Don't use -c . It will be done automatically. I think, the orb program reads case.dmat* files, and produces case.vorb* files. It is not reading vorb files. And it does read the complex part !!! And third: the vorb* potential should be applied only once. It can be done in x lapw1 -orb -up/dn OR in x lapwso -orb -up but not in both. Application in lapwso also includes cross terms between spin-up and dn, while in lapw1 it excludes them. When reporting differences between wien2k_16 and 17, you have to find out, what causes these differences. a) compare case.vorbup/dn in both cases. Are they the same/similar ? In particular with respect to symmetry (+m and -m terms symmetric ???) b) run lapwso of 17 with vorbs of 16 and vice versa. If nothing helps, send me your struct file + some details (inputs) and I'll check it myself. Peter Am 16.01.2018 um 17:57 schrieb William Lafargue-dit-Hauret: Dear Profs. Blaha and Marks, Thank you for your advices. I have a question regarding your comment on the EECE case. The resulting effective potential of LDA+U and EECE corrections is decomposed in vorb files, but I don't understand why the spin-coupling file case.vorbud shouldn't appear in the second case. I have a second question regarding the reading of these orbital potential files. We noticed the orb program read only the real part, neglecting the imaginary one (Prof. Marks already noticed it in the source code). Due to our energy scale which is tiny, could we expect an impact of such approximation ? Considering your last comments, it seems not due to the execution of the orb program only in lapw1 and not during the perturbative procedure. Thank you by advance. All the best, William Lafargue-dit-Hauret Le 16/01/2018 à 17:05, Xavier Rocquefelte a écrit : I was not clear Peter. I clarify the way we proceed. We do runsp_lapw -eece -p -ec 0.1 -NI Then for larger EMAX and kmesh without SO we do : x lapw1 -up -c -orb x lapw1 -dn -c -orb And for the different magnetization directions we do: x lapwso -c -up -orb x lapw2 -so -up -c x lapw2 -so -dn -c Le 16/01/2018 à 16:58, Peter Blaha a écrit : Hups: If this is true, you are counting the orbital potential twice ! -orb should only be present in the lapwso step. (And in fact, the lapw1 steps need to be done just once for the increased k-mesh; but not when changing the M-direction in case.inso) Please check the presence of case.vorbud. It must not be there for EECE. You could also test Laurence suggestion, running: x lapw1 -up/dn -orb x lapwso -up (no -orb !!!) and see of it makes a difference. On 01/16/2018 04:52 PM, Xavier Rocquefelte wrote: Dear Peter You are totally correct. We are doing SO non-selfconsistent by using a standard procedure for EECE calculations: runsp_lapw -eece -p -ec 0.1 -NI and then we estimate the MAE using this non-SCF procedure : Increase EMAX in case.in1c - increase kmesh if needed x lapw1 -up -c -orb x lapw1 -dn -c -orb x lapwso -c -up -orb x lapw2 -so -up -c x lapw2 -so -dn -c Such a procedure was working nicely in previous WIEN2k versions. Best Regards Xavier Le 16/01/2018 à 16:34, Peter Blaha a écrit : Hallo Xavier, Looks rather strange. Eventually I would have expected problems both, in 16.1 and 17.1 (but not 14.2) due to the off-diagonal density matrices. But this should concern ONLY LDA+U, not -eece. Just to be sure: I expect you do SO non-selfconsistent, so vorbup/dn(du) files are always the same ?? (just running lapwso and lapw2 -so) Did you make sure that for -eece -so, case.vorbud is NOT present (from previous LDA+U). Peter On 01/16/2018 02:50 PM, Xavier Rocquefelte wrote: Here is a document showing the results graphically. https://filesender.renater.fr/?s=download=8ac3a214-edfa-4894-fa1f-27aba5a5522f It really looks like the problem we had before (using bad kmesh). We test it on two different compounds and in both cases WIEN2k_16 gives a correct picture and not WIEN2k_17. We are now comparing the two versions of the code. Regards Xavier Le 16/01/2018 à 12:10, Xavier Rocquefelte a écrit : Dear All Finally the problem is not completely solved. More precisely, when we are doing GGA+SO calculations and using a correct kmesh (no temporal symmetry), we obtain a symmetric magnetocrystalline anisotropy, namely same MAE along [0 1 0] and [0 -1 0]. In contrast, when we are doing GGA+U+SO or EECE+SO with a correct kmesh we still obtain non-symmetric MAE, namely MAE along [0 1 0] and [0 -1 0] are different. In addition, the so obtained MAE looks
Re: [Wien] Magnetocrystalline anisotropy
Dear Profs. Blaha and Marks, Thank you for your advices. I have a question regarding your comment on the EECE case. The resulting effective potential of LDA+U and EECE corrections is decomposed in vorb files, but I don't understand why the spin-coupling file case.vorbud shouldn't appear in the second case. I have a second question regarding the reading of these orbital potential files. We noticed the orb program read only the real part, neglecting the imaginary one (Prof. Marks already noticed it in the source code). Due to our energy scale which is tiny, could we expect an impact of such approximation ? Considering your last comments, it seems not due to the execution of the orb program only in lapw1 and not during the perturbative procedure. Thank you by advance. All the best, William Lafargue-dit-Hauret Le 16/01/2018 à 17:05, Xavier Rocquefelte a écrit : I was not clear Peter. I clarify the way we proceed. We do runsp_lapw -eece -p -ec 0.1 -NI Then for larger EMAX and kmesh without SO we do : x lapw1 -up -c -orb x lapw1 -dn -c -orb And for the different magnetization directions we do: x lapwso -c -up -orb x lapw2 -so -up -c x lapw2 -so -dn -c Le 16/01/2018 à 16:58, Peter Blaha a écrit : Hups: If this is true, you are counting the orbital potential twice ! -orb should only be present in the lapwso step. (And in fact, the lapw1 steps need to be done just once for the increased k-mesh; but not when changing the M-direction in case.inso) Please check the presence of case.vorbud. It must not be there for EECE. You could also test Laurence suggestion, running: x lapw1 -up/dn -orb x lapwso -up (no -orb !!!) and see of it makes a difference. On 01/16/2018 04:52 PM, Xavier Rocquefelte wrote: Dear Peter You are totally correct. We are doing SO non-selfconsistent by using a standard procedure for EECE calculations: runsp_lapw -eece -p -ec 0.1 -NI and then we estimate the MAE using this non-SCF procedure : Increase EMAX in case.in1c - increase kmesh if needed x lapw1 -up -c -orb x lapw1 -dn -c -orb x lapwso -c -up -orb x lapw2 -so -up -c x lapw2 -so -dn -c Such a procedure was working nicely in previous WIEN2k versions. Best Regards Xavier Le 16/01/2018 à 16:34, Peter Blaha a écrit : Hallo Xavier, Looks rather strange. Eventually I would have expected problems both, in 16.1 and 17.1 (but not 14.2) due to the off-diagonal density matrices. But this should concern ONLY LDA+U, not -eece. Just to be sure: I expect you do SO non-selfconsistent, so vorbup/dn(du) files are always the same ?? (just running lapwso and lapw2 -so) Did you make sure that for -eece -so, case.vorbud is NOT present (from previous LDA+U). Peter On 01/16/2018 02:50 PM, Xavier Rocquefelte wrote: Here is a document showing the results graphically. https://filesender.renater.fr/?s=download=8ac3a214-edfa-4894-fa1f-27aba5a5522f It really looks like the problem we had before (using bad kmesh). We test it on two different compounds and in both cases WIEN2k_16 gives a correct picture and not WIEN2k_17. We are now comparing the two versions of the code. Regards Xavier Le 16/01/2018 à 12:10, Xavier Rocquefelte a écrit : Dear All Finally the problem is not completely solved. More precisely, when we are doing GGA+SO calculations and using a correct kmesh (no temporal symmetry), we obtain a symmetric magnetocrystalline anisotropy, namely same MAE along [0 1 0] and [0 -1 0]. In contrast, when we are doing GGA+U+SO or EECE+SO with a correct kmesh we still obtain non-symmetric MAE, namely MAE along [0 1 0] and [0 -1 0] are different. In addition, the so obtained MAE looks similar to the ones obtained in GGA+SO with a bad kmesh (including temporal symmetry). At this moment, we are checking all the recent modifications in SRC_ORB and SRC_LAPW2 related to the manipulation of case.vorbup, case.vorbdn and case.vorbud files. Surprisingly, the EECE+SO calculations in WIEN2k_16 are symmetric, while not in WIEN2k_17. Next soon ... I hope. Xavier Le 10/01/2018 à 15:10, Xavier Rocquefelte a écrit : Dear All The problem is solved and was related to one stupid human mistake. It was necessary to generate a kmesh without adding inversion (time-inversion symmetry). Indeed, as mentionned in the userguide when using kgen program: # *"add inversion" ?* This is asked only when inversion is NOT present. * Say *"YES"* in all cases except when you do *spin-polarized (magnetic) calculations WITH spin-orbit coupling * (this breaks time-inversion symmetry and thus one MUST NOT add inversion symmetry (eigenvalues at +k and -k may be different). If you properly generate the kmesh for the spin-orbit calculations by doing : x kgen -fbz, then you obtain a symmetric magnetic anisotrop. In conclusion the asymmetry I obtained was due to an improper definition of the kmesh (adding artificially time-inversion).