Hello Leila,

I see that a spin-polarized calculation with your input file gives a
system with two spin-up electrons. In this case, yes, the H atoms want
to move apart to become two independent atoms. So, in the
spin-polarized calculation, you need to fix the initial spin to zero.
FixSpin T
TotalSpin 0.0
Then I get the H2 binding energy of -4.8 eV. (It will be a little
smaller when corrected by BSSE).

Spin polarization is essential for the correct description of the H
atom (not essential for the molecule).

Also, as Haibo said, only the gamma point is needed for an isolated
molecules, more k-points just take more time.

Regards,

Natalia

On 2/28/11, Haibo Guo <[email protected]> wrote:
> Only gamma point is needed for isolated molecules or atoms. Spin
> polarization can be included; you need a initial antiferromagnetic
> configuration for H2. But without spin, the results should be close
> because H2 molecules don't have net spin polarization.
>
> H2 should behave well with most functionals. Here are some of my
> results of the binding energy (eV per bond):
>
> PBE (siesta): 4.76
> PBE (vasp): 4.54
> HSE06 (vasp): 4.53
>
> Hope this helps.
>
> Haibo
>
>
>
> 2011/2/28 Süle Péter <[email protected]>:
>>
>>  Dear Leila,
>>
>> for me using siesta-2.0.2 with your fdf file (GGA/PBE, 5X5)
>>
>>  0.75 -31.5205 eV/H2
>>  10.   -25.4867
>>  inf   -24.3496
>>
>>  Ec= ~ -3.5854 eV/atom (e.g. -7.17 eV bond energy)
>>
>> which is not bad. I mean one can not necessariliy expect
>> with GGA a better value. Hybdrid functionals should give better
>> results. The issue of better VASP values should be discussed
>> in a more detail by experts since indeed quite oftenly happens.
>>
>>  Best regards, Péter Sule
>>
>>
>> ----------------------------------------------------
>> Dr. Peter Sule
>> senior research associate
>> Institue for Technical Physics and Materials Science
>> (MTA-MFA), Konkoly-Thege M. 29-33, Budapest, Hungary
>> tel.: (36) 1 392 2222/3605
>> fax.: (36) 1 392 22 73
>> www.mfa.kfki.hu/~sule / [email protected]
>> -----------------------------------------------------
>>
>>
>> On Mon, 28 Feb 2011, leila wrote:
>>
>>>
>>> Hi, everyone,
>>>
>>>
>>>
>>> I want to do some calculations on the H effect in Fe, before which I have
>>> to
>>> promise the accuracy of H potential. I first make a simple tests of the
>>> H2
>>> properties, including the H-H distance in H2, and also the binding energy
>>> (Defined as the energy difference of the H2 molecular and two isolated H
>>> atom).
>>>
>>> I find the H-H distance is around 0.75 Ang, which is near to the
>>> experimental value of 0.741 Ang, for both LDA and GGA pseudopotential.
>>> However, the binding energy is always not correct, calculated to be
>>> around
>>> -7.2 eV (The experimental and VASP results are all around -4.55 eV). My
>>> input file for H are in the attachments.
>>>
>>> I don’t know where the issues are. Could anybody help me?
>>>
>>>
>>>
>>>   In addition, I find that the spin polarization contributes a lot in the
>>> H2
>>> calculations. When I add the spin polarization effect in the VASP and
>>> SIESTA
>>> calculations, the H-H distance becomes to 2.89 Ang, and the binding
>>> energy
>>> is approaching to 0 eV. Can anyone explain this to me. Because Fe is
>>> magnetic materials, I have to consider spin polarization effect in my
>>> calculation.
>>>
>>>
>>>
>>> Thank you in advance!
>>>
>>> Yours sincerely,
>>>
>>> Leila
>>>
>>>
>>>
>>>
>>
>

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