Hi Team, i am seeing a weird issue in my environment. one of the gaussian job is failing with the slurm within a minute after it go for the execution without writing anything and unable to figure out the reason. The same job works fine without slurm on the same node.
slurmctld.log [2020-06-03T19:14:33.170] debug: Job 1357498 has more than one partition (normal)(21052) [2020-06-03T19:14:33.170] debug: Job 1357498 has more than one partition (normalGPUsmall)(21052) [2020-06-03T19:14:33.170] debug: Job 1357498 has more than one partition (normalGPUbig)(21052) [2020-06-03T19:15:12.497] debug: sched: JobId=1357498. State=PENDING. Reason=Priority, Priority=21052. Partition=normal,normalGPUsmall,normalGPUbig. [2020-06-03T19:15:12.497] debug: sched: JobId=1357498. State=PENDING. Reason=Priority, Priority=21052. Partition=normal,normalGPUsmall,normalGPUbig. [2020-06-03T19:15:12.497] debug: sched: JobId=1357498. State=PENDING. Reason=Priority, Priority=21052. Partition=normal,normalGPUsmall,normalGPUbig. [2020-06-03T19:16:12.626] debug: sched: JobId=1357498. State=PENDING. Reason=Priority, Priority=21052. Partition=normal,normalGPUsmall,normalGPUbig. [2020-06-03T19:17:12.753] debug: sched: JobId=1357498. State=PENDING. Reason=Priority, Priority=21052. Partition=normal,normalGPUsmall,normalGPUbig. [2020-06-03T19:18:12.882] debug: sched: JobId=1357498. State=PENDING. Reason=Priority, Priority=21052. Partition=normal,normalGPUsmall,normalGPUbig. [2020-06-03T19:19:13.633] sched: Allocate JobID=1357498 NodeList=oled4 #CPUs=4 Partition=normal [2020-06-04T12:25:36.961] _job_complete: JobID=1357498 State=0x1 NodeCnt=1 WEXITSTATUS 2 [2020-06-04T12:25:36.961] SLURM Job_id=1357498 Name=job1 Ended, Run time 17:06:23, FAILED, ExitCode 2 [2020-06-04T12:25:36.962] _job_complete: JobID=1357498 State=0x8005 NodeCnt=1 done slurmd.log [2020-06-04T12:22:43.712] [1357498.batch] debug: jag_common_poll_data: Task average frequency = 2769 pid 64084 mem size 4625724 23696420 time 164642.840000(164537+105) [2020-06-04T12:23:13.712] [1357498.batch] debug: jag_common_poll_data: Task average frequency = 2769 pid 64084 mem size 4625724 23696420 time 164762.820000(164657+105) [2020-06-04T12:23:43.712] [1357498.batch] debug: jag_common_poll_data: Task average frequency = 2769 pid 64084 mem size 4625724 23696420 time 164882.810000(164777+105) [2020-06-04T12:24:13.712] [1357498.batch] debug: jag_common_poll_data: Task average frequency = 2769 pid 64084 mem size 4625724 23696420 time 165002.790000(164897+105) [2020-06-04T12:24:43.712] [1357498.batch] debug: jag_common_poll_data: Task average frequency = 2769 pid 64084 mem size 4625724 23696420 time 165122.770000(165016+105) [2020-06-04T12:25:13.713] [1357498.batch] debug: jag_common_poll_data: Task average frequency = 2769 pid 64084 mem size 4625724 23696420 time 165242.750000(165136+105) [2020-06-04T12:25:36.955] [1357498.batch] task 0 (64084) exited with exit code 2. [2020-06-04T12:25:36.955] [1357498.batch] debug: task_p_post_term: affinity 1357498.4294967294, task 0 [2020-06-04T12:25:36.960] [1357498.batch] debug: step_terminate_monitor_stop signaling condition [2020-06-04T12:25:36.960] [1357498.batch] job 1357498 completed with slurm_rc = 0, job_rc = 512 [2020-06-04T12:25:36.960] [1357498.batch] sending REQUEST_COMPLETE_BATCH_SCRIPT, error:0 status 512 [2020-06-04T12:25:36.961] [1357498.batch] debug: Message thread exited [2020-06-04T12:25:36.962] [1357498.batch] done with job [2020-06-04T12:25:36.962] debug: task_p_slurmd_release_resources: affinity jobid 1357498 [2020-06-04T12:25:36.962] debug: credential for job 1357498 revoked [2020-06-04T12:25:36.963] debug: Waiting for job 1357498's prolog to complete [2020-06-04T12:25:36.963] debug: Finished wait for job 1357498's prolog to complete [2020-06-04T12:25:36.963] debug: [job 1357498] attempting to run epilog [/etc/slurm/slurm.epilog.clean] [2020-06-04T12:25:37.254] debug: completed epilog for jobid 1357498 [2020-06-04T12:25:37.254] debug: Job 1357498: sent epilog complete msg: rc = 0 any suggestion will be welcome to troubleshoot this issue further. Regards Navin.