I was playing around with the make install and after looking at the
Makefile (which I really don't understand), I decided to try a 'make
install-linux-all' AND it appeared to read the Makefile.config.incl
correctly!  However, the default location that I wanted was not
"owned" by me which generated a permission error, so then I did a
'sudo make install-linux-all' and then it DID NOT read my
Makefile.config.incl.  So I changed the ownership of the location I
wanted to install TPP and worked (doing a 'make install-linux-all'
without the sudo).  Hmmm... I don't know if it completely works yet,
but I have been able to use the web interface once I have activated
apache.

John

On Jan 27, 2:37 pm, "Brian Pratt" <[email protected]> wrote:
> That's pretty strange - I wouldn't think the build would succeed with the
> OBJ_ARCH directory set to /../build/linux .
>
> What does you Makefile.config.incl look like?
>
> Brian
>
> -----Original Message-----
> From: [email protected]
>
> [mailto:[email protected]] On Behalf Of marmot
> Sent: Tuesday, January 27, 2009 1:17 PM
> To: spctools-discuss
> Subject: [spctools-discuss] Problems Installing TPP4.1.1 on Linux
>
> Hi Everyone,
>
> I think I have been able to successfully compile TPP4.1.1 under Ubuntu
> 8.04.  However when I do a "make install", I get the following error:
>
> # Copy all source executables and configuration files to their
> location
> cp -f /../build/linux/ASAPRatioPeptideParser /usr/local/tpp/bin/
> cp: cannot stat `/../build/linux/ASAPRatioPeptideParser': No such file
> or directory
> make: *** [install-linux-xml] Error 1
>
> For some reason make is getting the wrong file location (the / at the
> beginning should be removed).  Also it looks like the install is
> ignoring my Makefile.config.incl and wanting to place the files in the
> default /usr/local/tpp instead of were I want it (/home/tpp).  Any
> help would be appreciated.
>
> Dr. John Chik
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