#2.  see http://www.thegpm.org/TANDEM/api/refpctm.html

I hate to state the obvious but this will only be applied in
refinement mode so make sure that's turned on.

On Wed, Sep 16, 2009 at 2:44 PM, rhodea <[email protected]> wrote:
>
> Dear friends,
>
> If I want to use the following PTM:
> Monoisotopic:   -18.010565 Site:        N       Position:       Protein C-term
>
> How should I set the input.xml parameters?
> 1. <note type="input" label="refine, potential C-terminus
> modifications">-18.010...@n</note>
> or
> 2.<note type="input" label="refine, potential C-terminus
> modifications">-18.010...@]</note>
> or
> 3.<note type="input" label="refine, potential modification
> mass">-18.010...@n</note>
> or
> 4.<note type="input" label="refine, potential modification
> mass">-18.010...@]</note>
>
> >
>

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