I am not sure about Spectum Mill. But iProphet and Scaffold is working for combining multiple search engine results (iProphet is included in TPP).
[iProphet (a.k.a. InterProphet)] http://tools.proteomecenter.org/wiki/index.php?title=TPP_Demo2009#8._Further_peptide-level_validation_iProphet http://www.proteomecenter.org/ASMS/08asms.shteynberg.pdf [Scaffold] http://www.proteomesoftware.com/Proteome_software_prod_Scaffold.html http://www.proteomesoftware.com/Proteome_software_pro_muli_search.html Taejoon On Oct 6, 11:17 am, zeyu sun <[email protected]> wrote: > Hi, I searched my spectrum by both Mascot and Spectrum Mill. Can I combine > both search results into the same TPP analysis? Also, I have a dummy > question here, shall I accept matches that cross threshold from either > Mascot or Spectrum Mill or, accept matches that cross the threshold of > both? > any thoughts? > Thank you! > > Sun --~--~---------~--~----~------------~-------~--~----~ You received this message because you are subscribed to the Google Groups "spctools-discuss" group. To post to this group, send email to [email protected] To unsubscribe from this group, send email to [email protected] For more options, visit this group at http://groups.google.com/group/spctools-discuss?hl=en -~----------~----~----~----~------~----~------~--~---
