Dear Group, I would like to flag a possible bug in a TPP tool.(Sorry in advance if this is the wrong forum to report bugs).
One of our users has reported issues with a tpp pepXML tool (he was using Mascot so I assume he was using Mascot2XML.exe). Our FASTA database has protein entries with special characters in then, i.e. *IFN-<alpha>2* *&* *V<beta>14 * This generated a pepXML file that was not valid xml, as the tags were not escaped properly. *<alternative_protein protein="tr|Q9UMA4|IFN-<alpha>2" num_tol_term="2" peptide_prev_aa="-" peptide_next_aa="S"/>* regards Simon Michnowicz Duty Programmer Australian Proteomics Computation Facility Ludwig Institute For Cancer Research Royal Melbourne Hospital, Victoria Tel: (+61 3) 9341 3155 Fax: (+61 3) 9341 3104 --~--~---------~--~----~------------~-------~--~----~ You received this message because you are subscribed to the Google Groups "spctools-discuss" group. To post to this group, send email to [email protected] To unsubscribe from this group, send email to [email protected] For more options, visit this group at http://groups.google.com/group/spctools-discuss?hl=en -~----------~----~----~----~------~----~------~--~---
