I don't personally know anything about it, but a quick googling brings up
this thread that may help you find someone who does:
http://groups.google.com/group/spctools-discuss/tree/browse_frm/month/2007-11/53e4277da13cd30b?rnum=91&_done=%2Fgroup%2Fspctools-discuss%2Fbrowse_frm%2Fmonth%2F2007-11%3F

- Brian Pratt

On Tue, Nov 17, 2009 at 6:08 AM, Loïc JOFFRE <[email protected]> wrote:

>
> Hello everyone,
>
> I have .omx result files (from OMSSA browser 2.1.1) and I would like
> to use the PeptideProphet (TPP v4.3.1).
> However, the PeptideProphet only accepts .pepxml files, how could I do
> to run this process from my OMSSA result files?
>
> I have seen that a converter tool exist (omssa2pepxml) but I do not
> understand how to use it, I have just found the source code of this
> program on the web.
>
> I am working on Windows XP.
>
> Thanks a lot,
>
> Loïc Joffre
>
> >
>

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