Hello everyone,

I have .omx result files (from OMSSA browser 2.1.1) and I would like
to use the PeptideProphet (TPP v4.3.1).
However, the PeptideProphet only accepts .pepxml files, how could I do
to run this process from my OMSSA result files?

I have seen that a converter tool exist (omssa2pepxml) but I do not
understand how to use it, I have just found the source code of this
program on the web.

I am working on Windows XP.

Thanks a lot,

Loïc Joffre

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