HI Jimmy

Thanks. I figured it out as i kept searching.

For others facing similar problem, I am elaborating on how i solved it -

1. Downloaded and unzipped proteowizard from sourceforge
2. Download Thermo's MSFilereader setup from
http://sjsupport.thermofinnigan.com/public/detail.asp?id=624 (i hope it
doesnt change)
3. Install MSFilereader using either the exe or the msi provided.
4. Goto "C:\Program Files\Thermo\MSFileReader\" (or the installation
directory)and copy "XRawfile2.dll" to the pwiz folder
5. Now you can easily run msconvert.exe (it did for me).


Regards,

Amit Kumar Yadav
Senior Research Fellow (SRF-CSIR)
IGIB, New Delhi (India)

http://masswiz.igib.res.in




On Tue, Mar 9, 2010 at 8:58 PM, Jimmy Eng <[email protected]> wrote:

> Correct for ReAdW right now.  You can use ProteoWizard's msconvert
> tool in combination with Thermo's free version of their MSFileReader
> though.
>
> On Mon, Mar 8, 2010 at 11:37 PM, Amit Yadav <[email protected]>
> wrote:
> > Is there no way to convert RAW files without using XCalibur SDK ?
> > Regards,
> >
> > Amit Kumar Yadav
> > Senior Research Fellow (SRF-CSIR)
> > IGIB, New Delhi (India)
> >
> > http://masswiz.igib.res.in
> >
> >
> >
> >
> > On Sat, Feb 27, 2010 at 4:22 AM, Omoruyi Osula <[email protected]>
> wrote:
> >>
> >> It worked. Thank you.
> >> On 2/25/, Jimmy Eng <[email protected]> wrote:
> >> > You're calling it wrong (old style).  Type 'ReAdW' without any other
> >> > arguments to find the current usage statement.  Assuming you want to
> >> > centroid, compress (which you should), invoke it as
> >> >
> >> >    ReAdW --centroid --compress --mzXML filename.RAW
> >> >
> >> >
> >> > On Thu, Feb 25, 2010 at 8:54 AM, oosula <[email protected]> wrote:
> >> >> I'm having difficulty converting my .RAW file to mzXML using the
> ReAdW
> >> >> program. After downloading the program along with all the necessary
> >> >> files ( zlib.dll, .RAW file, etc), I then went to the command prompt,
> >> >> found my directory which contained the ReAdW and the file of
> interest,
> >> >> and from there tried to do the conversion. I basically typed "ReAdW
> >> >> filename.RAW c after the path name based on some online directions I
> >> >> found, and it just keeps taking me back to instructions that can be
> >> >> found in the README text that comes with the program. In other words,
> >> >> it won't convert the file at all. Can anyone help me??
> >> >>
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