Hi Matt, Thanks for the great info. It will surely save a lot of trouble for people trying this out. Regards,
Amit Kumar Yadav Senior Research Fellow (SRF-CSIR) IGIB, New Delhi (India) http://masswiz.igib.res.in On Wed, Mar 10, 2010 at 12:58 AM, Matthew Chambers < [email protected]> wrote: > Hi Amit, > > Recent pwiz snapshots come bundled with the necessary MSFileReader DLLs. No > other installation is required. > > http://teamcity.labkey.org:8080/repository/download/bt36/10408:id/pwiz-bin-windows-x86-vc90-release-shared-2_0_1881.tar.bz2 > > -Matt > > > > On 3/9/2010 11:29 AM, Amit Yadav wrote: > > HI Jimmy > > Thanks. I figured it out as i kept searching. > > For others facing similar problem, I am elaborating on how i solved it - > > 1. Downloaded and unzipped proteowizard from sourceforge > 2. Download Thermo's MSFilereader setup from > http://sjsupport.thermofinnigan.com/public/detail.asp?id=624 (i hope it > doesnt change) > 3. Install MSFilereader using either the exe or the msi provided. > 4. Goto "C:\Program Files\Thermo\MSFileReader\" (or the installation > directory)and copy "XRawfile2.dll" to the pwiz folder > 5. Now you can easily run msconvert.exe (it did for me). > > > Regards, > > Amit Kumar Yadav > Senior Research Fellow (SRF-CSIR) > IGIB, New Delhi (India) > > http://masswiz.igib.res.in > > > > > On Tue, Mar 9, 2010 at 8:58 PM, Jimmy Eng <[email protected]> wrote: > >> Correct for ReAdW right now. You can use ProteoWizard's msconvert >> tool in combination with Thermo's free version of their MSFileReader >> though. >> >> On Mon, Mar 8, 2010 at 11:37 PM, Amit Yadav <[email protected]> >> wrote: >> > Is there no way to convert RAW files without using XCalibur SDK ? >> > Regards, >> > >> > Amit Kumar Yadav >> > Senior Research Fellow (SRF-CSIR) >> > IGIB, New Delhi (India) >> > >> > http://masswiz.igib.res.in >> > >> > >> > >> > >> > On Sat, Feb 27, 2010 at 4:22 AM, Omoruyi Osula <[email protected]> >> wrote: >> >> >> >> It worked. Thank you. >> >> On 2/25/, Jimmy Eng <[email protected]> wrote: >> >> > You're calling it wrong (old style). Type 'ReAdW' without any other >> >> > arguments to find the current usage statement. Assuming you want to >> >> > centroid, compress (which you should), invoke it as >> >> > >> >> > ReAdW --centroid --compress --mzXML filename.RAW >> >> > >> >> > >> >> > On Thu, Feb 25, 2010 at 8:54 AM, oosula <[email protected]> wrote: >> >> >> I'm having difficulty converting my .RAW file to mzXML using the >> ReAdW >> >> >> program. After downloading the program along with all the necessary >> >> >> files ( zlib.dll, .RAW file, etc), I then went to the command >> prompt, >> >> >> found my directory which contained the ReAdW and the file of >> interest, >> >> >> and from there tried to do the conversion. I basically typed "ReAdW >> >> >> filename.RAW c after the path name based on some online directions I >> >> >> found, and it just keeps taking me back to instructions that can be >> >> >> found in the README text that comes with the program. In other >> words, >> >> >> it won't convert the file at all. Can anyone help me?? >> >> >> >> >> >> -- >> >> >> You received this message because you are subscribed to the Google >> >> >> Groups >> >> >> "spctools-discuss" group. >> >> >> To post to this group, send email to >> [email protected]. >> >> >> To unsubscribe from this group, send email to >> >> >> [email protected]<spctools-discuss%[email protected]> >> . >> >> >> For more options, visit this group at >> >> >> http://groups.google.com/group/spctools-discuss?hl=en. >> >> >> >> >> >> >> >> > >> >> > -- >> >> > You received this message because you are subscribed to the Google >> >> > Groups >> >> > "spctools-discuss" group. >> >> > To post to this group, send email to >> [email protected]. >> >> > To unsubscribe from this group, send email to >> >> > [email protected]<spctools-discuss%[email protected]> >> . >> >> > For more options, visit this group at >> >> > http://groups.google.com/group/spctools-discuss?hl=en. >> >> > >> >> > >> >> >> >> -- >> >> You received this message because you are subscribed to the Google >> Groups >> >> "spctools-discuss" group. >> >> To post to this group, send email to [email protected] >> . >> >> To unsubscribe from this group, send email to >> >> [email protected]<spctools-discuss%[email protected]> >> . >> >> For more options, visit this group at >> >> http://groups.google.com/group/spctools-discuss?hl=en. >> >> >> > >> > -- >> > You received this message because you are subscribed to the Google >> Groups >> > "spctools-discuss" group. >> > To post to this group, send email to [email protected]. >> > To unsubscribe from this group, send email to >> > [email protected]<spctools-discuss%[email protected]> >> . >> > For more options, visit this group at >> > http://groups.google.com/group/spctools-discuss?hl=en. >> > >> >> -- >> You received this message because you are subscribed to the Google Groups >> "spctools-discuss" group. >> To post to this group, send email to [email protected]. >> To unsubscribe from this group, send email to >> [email protected]<spctools-discuss%[email protected]> >> . >> For more options, visit this group at >> http://groups.google.com/group/spctools-discuss?hl=en. >> >> > -- > You received this message because you are subscribed to the Google Groups > "spctools-discuss" group. > To post to this group, send email to [email protected]. > To unsubscribe from this group, send email to > [email protected]. > For more options, visit this group at > http://groups.google.com/group/spctools-discuss?hl=en. > > -- > You received this message because you are subscribed to the Google Groups > "spctools-discuss" group. > To post to this group, send email to [email protected]. > To unsubscribe from this group, send email to > [email protected]<spctools-discuss%[email protected]> > . > For more options, visit this group at > http://groups.google.com/group/spctools-discuss?hl=en. > -- You received this message because you are subscribed to the Google Groups "spctools-discuss" group. 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