It always give me an error message when I run PeptideProphet. My files were transferred as xml after mascot searching was done. The error message are as follows. Cound somebody tell me what's going on? Thank you in advance!
# Commands for session HMHX2UYYT on Wed May 26 12:03:21 2010 # BEGIN COMMAND BLOCK ###### BEGIN Command Execution ###### [Wed May 26 12:03:21 2010] EXECUTING: run_in c:/Inetpub/wwwroot/ISB/ data; c:\Inetpub\tpp-bin\xinteract -Ninteract.pep.xml -p0.05 -l7 -O c:/Inetpub/wwwroot/ISB/data/C1_trypsin_1.xml c:/Inetpub/wwwroot/ISB/ data/C1_trypsin_2.xml c:/Inetpub/wwwroot/ISB/data/C1_trypsin_3.xml c:/ Inetpub/wwwroot/ISB/data/C2_trypsin_1.xml OUTPUT: c:\Inetpub\tpp-bin\xinteract (TPP v4.3 JETSTREAM rev 0, Build 200908071234 (MinGW)) running: "C:/Inetpub/tpp-bin/InteractParser "interact.pep.xml" "c:/ Inetpub/wwwroot/ISB/data/C1_trypsin_1.xml" "c:/Inetpub/wwwroot/ISB/ data/C1_trypsin_2.xml" "c:/Inetpub/wwwroot/ISB/data/C1_trypsin_3.xml" "c:/Inetpub/wwwroot/ISB/data/C2_trypsin_1.xml" -L"7"" file 1: c:/Inetpub/wwwroot/ISB/data/C1_trypsin_1.xml file 2: c:/Inetpub/wwwroot/ISB/data/C1_trypsin_2.xml file 3: c:/Inetpub/wwwroot/ISB/data/C1_trypsin_3.xml file 4: c:/Inetpub/wwwroot/ISB/data/C2_trypsin_1.xml processed altogether 8267 results results written to file c:/Inetpub/wwwroot/ISB/data/interact.pep.xml direct your browser to http://localhost/ISB/data/interact.pep.shtml command completed in 18 sec running: "C:/Inetpub/tpp-bin/PeptideProphetParser "interact.pep.xml" MINPROB=0.05" (MASCOT) error: -1.0 homology score command "C:/Inetpub/tpp-bin/PeptideProphetParser "interact.pep.xml" MINPROB=0.05" failed: Operation not permitted command "C:/Inetpub/tpp-bin/PeptideProphetParser "interact.pep.xml" MINPROB=0.05" exited with non-zero exit code: 1 QUIT - the job is incomplete command "c:\Inetpub\tpp-bin\xinteract -Ninteract.pep.xml -p0.05 -l7 -O c:/Inetpub/wwwroot/ISB/data/C1_trypsin_1.xml c:/Inetpub/wwwroot/ISB/ data/C1_trypsin_2.xml c:/Inetpub/wwwroot/ISB/data/C1_trypsin_3.xml c:/ Inetpub/wwwroot/ISB/data/C2_trypsin_1.xml" failed: Operation not permitted END OUTPUT RETURN CODE:256 ###### End Command Execution ###### # All finished at Wed May 26 12:03:42 2010 # END COMMAND BLOCK -- You received this message because you are subscribed to the Google Groups "spctools-discuss" group. To post to this group, send email to [email protected]. To unsubscribe from this group, send email to [email protected]. For more options, visit this group at http://groups.google.com/group/spctools-discuss?hl=en.
