Actually if you follow this thread it looks like some progress has been made.
http://groups.google.com/group/spctools-discuss/browse_thread/thread/bbfad1a9a04d775f/9497da1edc9fd2d0?lnk=gst&q=Proteome+Discoverer%27s+.msf+to+TPP+input+files+(pepXML)#9497da1edc9fd2d0 On Dec 24, 3:48 pm, WoA <[email protected]> wrote: > PeptideProphet or iProphet is not working with the pep.xml files > generated by Proteome Discoverer v. 1.3. Did anybody face this > problem already? Are there some known issues regarding this? > > I'm using (TPP v4.4 VUVUZELA rev 1, Build 201010121551 (MinGW)). > > Thanks in Advance -- You received this message because you are subscribed to the Google Groups "spctools-discuss" group. To post to this group, send email to [email protected]. To unsubscribe from this group, send email to [email protected]. For more options, visit this group at http://groups.google.com/group/spctools-discuss?hl=en.
