Quite a lot of performance work was done in pwiz in late 2011 - do you know what version of pwiz is in use?
Brian Pratt On Thu, Aug 30, 2012 at 2:16 AM, Thomas Dybdal Pedersen <[email protected]> wrote: > Hi > > I've recently begun to investigate whether it was time to change our > pipeline from mxXML to mxML format. Our pipeline is partly based on xcmd > which uses RAMP to read in ms data. I quick comparison of the parsing speed > between mzML and mzXML showed that mzML was slower by a factor ~7. This is > quite substantial especially for larger files. > > I understand that the mzML parsing is based on pwiz instead of implemented > from the ground, which is probably the cause for the difference. Is there > any effort in creating a more effecient parser for the mzML format as this > format increase in relevance? > > with best wishes > > Thomas > > -- > You received this message because you are subscribed to the Google Groups > "spctools-discuss" group. > To view this discussion on the web visit > https://groups.google.com/d/msg/spctools-discuss/-/sDYMC6Ynd3cJ. > To post to this group, send email to [email protected]. > To unsubscribe from this group, send email to > [email protected]. > For more options, visit this group at > http://groups.google.com/group/spctools-discuss?hl=en. -- You received this message because you are subscribed to the Google Groups "spctools-discuss" group. To post to this group, send email to [email protected]. To unsubscribe from this group, send email to [email protected]. For more options, visit this group at http://groups.google.com/group/spctools-discuss?hl=en.
