It looks exactly like below. On Thursday, September 27, 2012 1:31:36 PM UTC-4, [email protected] wrote:
> Suzanne, > > It sounds as your Apache isn't configured to allow browsing of the data > folder, hence the reason why the pep.xml viewer can't load the file. I'm > guessing your missing the directives in the Apache configuration file. They > should look something like: > > Alias /ISB "C:/Inetpub/wwwroot/ISB" > > Alias /schema "C:/Inetpub/wwwroot/schema" > > <Directory "C:/Inetpub/wwwroot"> > Options Indexes MultiViews Includes > AllowOverride None > Order allow,deny > Allow from all > > AddType text/html .shtml > AddHandler server-parsed .shtml > > PassEnv WEBSERVER_ROOT > PassEnv WEBSERVER_TMP > </Directory> > > > On Thu, Sep 27, 2012 at 10:27 AM, Suzanne <[email protected] <javascript:> > > wrote: > >> No. I see "Webpage cannot be found" >> >> >> >> >> On Thursday, September 27, 2012 1:16:17 PM UTC-4, >> [email protected] wrote: >> >>> Do you get a directory listing when you navigate to http://localhost/ISB >>> ? >>> >>> On Thu, Sep 27, 2012 at 9:43 AM, Suzanne <[email protected]> wrote: >>> >>>> "LoadModule include_module modules/mod_include.so" is enabled. I >>>> reinstalled apache but still no luck loading the output, whether it is >>>> .pep.xml or interact.pep.shtml >>>> >>>> >>>> >>>> >>>> >>>> >>>> >>>> >>>> On Wednesday, September 26, 2012 3:44:45 PM UTC-4, Brian Hampton wrote: >>>> >>>>> Suzanne, >>>>> Not certain if the below apply to your case but good to know... >>>>> >>>>> Keep in mind that directory paths to file locations are hard coded in >>>>> the files themselves e.g. all files created after the database search >>>>> such >>>>> as .pep.xml and onward. So if you moved files and the directory paths in >>>>> their new location differs from where they were when the database search >>>>> was performed you will get file not found errors or similar. I wrote a >>>>> series of bash shell commands that will change the directory statements >>>>> in >>>>> the files to your specified new location. This is using Ubuntu 12.04. >>>>> Not >>>>> sure if this would work in Windows. >>>>> >>>>> Also make certain the apache config has mod_inculdes enabled or the >>>>> xml files won't be loaded. They are processed by the Apache server first >>>>> and the output is sent to the browser. Depending on your install of >>>>> Apache, they may need to be loaded. If you are using the Windows self >>>>> installing version of TPP this should already be taken care of. >>>>> >>>>> Brian Hampton >>>>> >>>>> University of Maryland School of Medicine >>>>> >>>>> On Wed, Sep 26, 2012 at 2:19 PM, Suzanne <[email protected]> wrote: >>>>> >>>>>> Yes. When I click in the pep.xml file in the Petunia interface, I >>>>>> rec'd an "unable to access file via webserver..." and it shows me a >>>>>> non-interactive version of the pep.xml. (On the 32bit computer (slow >>>>>> processor), I can view every file so far. I transferred the files from >>>>>> the >>>>>> 64-bit to the 32-bit computer which was a silly thing to do because the >>>>>> Apache servers are different!) >>>>>> >>>>>> When I click on either the xinteract or prot.shtml (or prot.html) >>>>>> links I rec'd an "The webpage cannot be found". The address it sends it >>>>>> to >>>>>> is, >>>>>> "http://localhost/ISB/data/...*****.interact.prot.html<http://localhost/ISB/data/...*.interact.prot.html> >>>>>> ". >>>>>> >>>>>> >>>>>> Suzanne >>>>>> >>>>>> >>>>>> >>>>>> >>>>>> >>>>>> On Wednesday, 26 September 2012 12:38:22 UTC-4, >>>>>> [email protected] wrote: >>>>>>> >>>>>>> Hi Suzanne, >>>>>>> >>>>>>> Are you getting this error when you click on the pep.xml file in the >>>>>>> Petunia interface? >>>>>>> >>>>>>> -Joe >>>>>>> >>>>>>> >>>>>>> On Wed, Sep 26, 2012 at 8:46 AM, Suzanne <[email protected]> wrote: >>>>>>> >>>>>>>> Hello. I wondered whether someone can help me determine why I >>>>>>>> cannot view the output files when I run the same expt on a 32 bit xp >>>>>>>> installation and can view the output files. >>>>>>>> >>>>>>>> Thank you. >>>>>>>> >>>>>>>> >>>>>>>> -- >>>>>>>> You received this message because you are subscribed to the Google >>>>>>>> Groups "spctools-discuss" group. >>>>>>>> To view this discussion on the web visit >>>>>>>> https://groups.google.com/d/**ms****g/spctools-discuss/-/NH-** >>>>>>>> DZ8vp1****-0J<https://groups.google.com/d/msg/spctools-discuss/-/NH-DZ8vp1-0J> >>>>>>>> . >>>>>>>> To post to this group, send email to spctools...@googlegroups.**com >>>>>>>> . >>>>>>>> To unsubscribe from this group, send email to spctools-discu...@** >>>>>>>> googlegroups****.com. >>>>>>>> For more options, visit this group at http://groups.google.com/** >>>>>>>> group****/spctools-discuss?hl=en<http://groups.google.com/group/spctools-discuss?hl=en> >>>>>>>> . >>>>>>>> >>>>>>> >>>>>>> -- >>>>>> You received this message because you are subscribed to the Google >>>>>> Groups "spctools-discuss" group. >>>>>> To view this discussion on the web visit https://groups.google.com/d/ >>>>>> **ms**g/spctools-discuss/-/_2o8-**PZMG**gIJ<https://groups.google.com/d/msg/spctools-discuss/-/_2o8-PZMGgIJ> >>>>>> . >>>>>> To post to this group, send email to spctools...@googlegroups.**com. >>>>>> To unsubscribe from this group, send email to spctools-discu...@** >>>>>> googlegroups**.com. >>>>>> For more options, visit this group at http://groups.google.com/** >>>>>> group**/spctools-discuss?hl=en<http://groups.google.com/group/spctools-discuss?hl=en> >>>>>> . >>>>>> >>>>> >>>>> -- >>>> You received this message because you are subscribed to the Google >>>> Groups "spctools-discuss" group. >>>> To view this discussion on the web visit https://groups.google.com/d/** >>>> msg/spctools-discuss/-/**t85CJOKPn_0J<https://groups.google.com/d/msg/spctools-discuss/-/t85CJOKPn_0J> >>>> . >>>> >>>> To post to this group, send email to spctools...@googlegroups.**com. >>>> To unsubscribe from this group, send email to spctools-discu...@** >>>> googlegroups.com. >>>> For more options, visit this group at http://groups.google.com/** >>>> group/spctools-discuss?hl=en<http://groups.google.com/group/spctools-discuss?hl=en> >>>> . >>>> >>> >>> -- >> You received this message because you are subscribed to the Google Groups >> "spctools-discuss" group. >> To view this discussion on the web visit >> https://groups.google.com/d/msg/spctools-discuss/-/WhN5aL8CsH8J. >> >> To post to this group, send email to >> [email protected]<javascript:> >> . >> To unsubscribe from this group, send email to >> [email protected] <javascript:>. >> For more options, visit this group at >> http://groups.google.com/group/spctools-discuss?hl=en. >> > > -- You received this message because you are subscribed to the Google Groups "spctools-discuss" group. 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