Hi all,

I am told that the most recent version of Peptide/ProteinProphet is compatible with MS-GF+ search output. Is this true? If so, where can I obtain it? I've already tried using TPP version 4.6.2 and xinteract fails upon calling PeptideProphet with the message that MS-GF+ is not recognized.

Thanks in advance for any help.

Best,
Jesse

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Jesse G. Meyer
Graduate Student
Department of Chemistry and Biochemistry
University of California, San Diego
[email protected]

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