If you have spaces in your directory path or file name i.e. "PTMProphetParser NO ", get rid of those and try again?
On Mon, Aug 5, 2013 at 6:49 AM, chr12is <[email protected]> wrote: > Hi all, > > I am having an error when using xinteract. I am running the newest version > of the TPP (4.6.3) on a CentOS cluster. Here is the error: > > running: "/software/src/TPP/bin/PTMProphetParser NO > /output/testoutput.ipro.pep.xml /output/testoutput.ptm.ipro.pep.xml" > INFO: Writing file /testoutput.ptm.ipro.pep.xml ... > terminate called after throwing an instance of > 'boost::exception_detail::clone_impl<boost::exception_detail::error_info_injector<std::ios_base::failure> > >' > what(): failed opening file: No such file or directory > > command "/software/src/TPP/bin/PTMProphetParser NO > /output/testoutput.ipro.pep.xml /output/testoutput.ptm.ipro.pep.xml" exited > with non-zero exit code: 6 > QUIT - the job is incomplete > > I see no way to disable PTM Prophet, so I cannot get around it. If I run > the same xinteract command in TPP 4.6.2 on the same machine, it runs fine. > I can see that it is looking for that file, but I do not understand why. I > haven't told it to do anything with PTM prophet. > > Thanks, > Chris > > -- > You received this message because you are subscribed to the Google Groups > "spctools-discuss" group. > To unsubscribe from this group and stop receiving emails from it, send an > email to [email protected]. > To post to this group, send email to [email protected]. > Visit this group at http://groups.google.com/group/spctools-discuss. > For more options, visit https://groups.google.com/groups/opt_out. > > > -- You received this message because you are subscribed to the Google Groups "spctools-discuss" group. To unsubscribe from this group and stop receiving emails from it, send an email to [email protected]. To post to this group, send email to [email protected]. Visit this group at http://groups.google.com/group/spctools-discuss. For more options, visit https://groups.google.com/groups/opt_out.
